FFCP PHASE1:Hg19::chr3:95928689..95928701,-: Difference between revisions
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|id=chr3:95928689..95928701,-
|short_description=p@chr3:95928689..95928701,-
|description=CAGE_peak_at_chr3:95928689..95928701,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:95928689..95928701,- | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_at_chr3:95928689..95928701,- | |||
|id=chr3:95928689..95928701,- | |||
|ontology_enrichment_celltype=CL:0000066!2.40e-09!254;CL:0000082!2.22e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.77e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.81e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.06e-15;30!UBERON:0008947;7.03e-08;29 | |||
|ontology_enrichment_disease=DOID:1749!1.13e-16!14;DOID:305!2.63e-15!106;DOID:0050615!3.98e-15!16;DOID:0050619!2.53e-11!1;DOID:1357!2.53e-11!1;DOID:0050687!9.25e-11!143;DOID:1324!1.42e-10!15;DOID:162!9.45e-08!235;DOID:14566!1.55e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.46e-50;1!DOID:1357;1.46e-50;1!DOID:0050615;1.29e-28;16!DOID:1324;3.04e-14;15!DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.46e-50,1;DOID:1357,1.46e-50,1;DOID:0050615,1.36e-28,16;DOID:1324,3.15e-14,15;DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!2.53e-11!1;UBERON:0001825!2.53e-11!1;UBERON:0003343!3.96e-10!4;UBERON:0004785!3.96e-10!4;UBERON:0004802!2.22e-08!19;UBERON:0000115!2.22e-08!19;UBERON:0003729!2.80e-08!5;UBERON:0001004!1.59e-07!72;UBERON:0000344!1.79e-07!12;UBERON:0002048!2.96e-07!22;UBERON:0000117!2.96e-07!22;UBERON:0000171!2.96e-07!22;UBERON:0000170!2.96e-07!22;UBERON:0005597!2.96e-07!22;UBERON:0000118!2.96e-07!22;UBERON:0005178!5.45e-07!34;UBERON:0002224!5.45e-07!34;UBERON:0005181!8.74e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.46e-50;1!UBERON:0001825;1.46e-50;1!UBERON:0002394;1.21e-13;4!UBERON:0003928;1.21e-13;4!UBERON:0004802;1.77e-11;19!UBERON:0000115;1.77e-11;19!UBERON:0002048;4.64e-10;22!UBERON:0004807;4.64e-10;22!UBERON:0000117;4.64e-10;22!UBERON:0000171;4.64e-10;22!UBERON:0000170;4.64e-10;22!UBERON:0002294;2.26e-08;7!UBERON:0001173;2.26e-08;7!UBERON:0005181;3.64e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.46e-50,1;UBERON:0001825,1.46e-50,1;UBERON:0004802,1.81e-11,19;UBERON:0000115,1.81e-11,19;UBERON:0002048,4.74e-10,22;UBERON:0000117,4.74e-10,22;UBERON:0000171,4.74e-10,22;UBERON:0000170,4.74e-10,22;UBERON:0005597,4.74e-10,22;UBERON:0000118,4.74e-10,22;UBERON:0002394,1.44e-09,6;UBERON:0003928,1.44e-09,6;UBERON:0004807,4.06e-08,28;UBERON:0001004,6.64e-07,74;UBERON:0005178,7.37e-07,34;UBERON:0002224,7.37e-07,34;UBERON:0002294,8.37e-07,9;UBERON:0001173,8.37e-07,9;UBERON:0004912,8.37e-07,9 | |||
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|short_description=p@chr3:95928689..95928701,- | |||
}} | }} |
Latest revision as of 23:56, 29 July 2015
Short description: | p@chr3:95928689..95928701, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:95928689..95928701, - |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.81e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.46e-50 | 1 |
paranasal sinus | 1.46e-50 | 1 |
respiratory tract epithelium | 1.81e-11 | 19 |
lung epithelium | 1.81e-11 | 19 |
lung | 4.74e-10 | 22 |
respiratory tube | 4.74e-10 | 22 |
respiration organ | 4.74e-10 | 22 |
pair of lungs | 4.74e-10 | 22 |
lung primordium | 4.74e-10 | 22 |
lung bud | 4.74e-10 | 22 |
bile duct | 1.44e-09 | 6 |
digestive system duct | 1.44e-09 | 6 |
respiratory system epithelium | 4.06e-08 | 28 |
respiratory system | 6.64e-07 | 74 |
thoracic cavity element | 7.37e-07 | 34 |
thoracic cavity | 7.37e-07 | 34 |
biliary system | 8.37e-07 | 9 |
biliary tree | 8.37e-07 | 9 |
biliary bud | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.46e-50 | 1 |
maxillary sinus cancer | 1.46e-50 | 1 |
respiratory system cancer | 1.36e-28 | 16 |
lung cancer | 3.15e-14 | 15 |
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |