FFCP PHASE1:Hg19::chr4:15003957..15003969,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:15003957..15003969,-
|short_description=p3@uc003gnh.1
|description=CAGE_peak_3_at_uc003gnh.1_5end
|association_with_transcript=90bp_to_uc003gnh.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_uc003gnh.1_5end | |||
|cluster_id=chr4:15003957..15003969,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_uc003gnh.1_5end | |||
|id=chr4:15003957..15003969,- | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-12!140;CL:0000037!1.49e-10!172;CL:0000566!1.49e-10!172;CL:0000988!3.87e-10!182;CL:0000766!4.74e-10!76;CL:0002032!5.66e-10!165;CL:0000837!5.66e-10!165;CL:0002031!9.39e-10!124;CL:0002087!1.41e-09!119;CL:0002057!2.82e-08!42;CL:0000860!1.76e-07!45;CL:0000839!3.69e-07!70;CL:0000623!4.86e-07!3;CL:0000825!4.86e-07!3;CL:0000557!5.40e-07!71;CL:0000763!6.23e-07!112;CL:0000049!6.23e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000346;8.86e-07;3!CL:1000428;8.86e-07;3!CL:0002567;8.86e-07;3!CL:0000775;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.70e-07,3;CL:1000428,7.70e-07,3;CL:0000775,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.48e-18;1!UBERON:0009117;1.27e-07;10!UBERON:0005564;1.27e-07;10!UBERON:0003056;8.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.50e-09!102;UBERON:0003061!9.50e-09!102;UBERON:0002193!3.78e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.48e-18;1!UBERON:0001785;9.48e-18;1!UBERON:0002464;9.48e-18;1!UBERON:0004904;9.48e-18;1!UBERON:0001021;9.48e-18;1!UBERON:0003714;1.51e-09;2!UBERON:0005162;1.51e-09;2!UBERON:0000122;1.51e-09;2!UBERON:0000473;2.60e-09;8!UBERON:0003135;5.23e-07;11!UBERON:0000412;8.86e-07;3!UBERON:0001992;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2;UBERON:0000473,2.89e-09,8;UBERON:0003135,5.64e-07,11;UBERON:0000412,7.70e-07,3;UBERON:0001992,7.70e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0.651032612147555,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0,2.06847408441971,2.5819387343353,1.35426486594342,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0,0,0.260118695119756,0,0,0,0,0.267540828089713,2.09071047609954,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.414656231081544,0,0.75745460055828,0,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,1.28823786971007,6.96706738406064,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p3@uc003gnh.1 | |||
}} | }} |
Latest revision as of 02:09, 30 July 2015
Short description: | p3@uc003gnh.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003gnh.1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 90bp_to_uc003gnh.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.70e-07 | 3 |
stem cell of epidermis | 7.70e-07 | 3 |
neutrophil | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.03e-17 | 1 |
cranial nerve | 1.03e-17 | 1 |
nerve trunk | 1.03e-17 | 1 |
nerve connecting eye with brain | 1.03e-17 | 1 |
nerve | 1.03e-17 | 1 |
retinal neural layer | 1.03e-17 | 1 |
presumptive neural retina | 1.03e-17 | 1 |
neural tissue | 1.57e-09 | 2 |
multi cell component structure | 1.57e-09 | 2 |
neuron projection bundle | 1.57e-09 | 2 |
testis | 2.89e-09 | 8 |
male reproductive organ | 5.64e-07 | 11 |
dermal papilla | 7.70e-07 | 3 |
papillary layer of dermis | 7.70e-07 | 3 |