FFCP PHASE1:Hg19::chr4:8237151..8237165,+: Difference between revisions
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|id=chr4:8237151..8237165,+
|short_description=p@chr4:8237151..8237165,+
|description=CAGE_peak_at_chr4:8237151..8237165,+
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:8237151..8237165,+ | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_at_chr4:8237151..8237165,+ | |||
|id=chr4:8237151..8237165,+ | |||
|ontology_enrichment_celltype=CL:0000784!7.87e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.09e-14;3!CL:0002188;2.74e-09;5!CL:1000746;5.38e-07;7!CL:1000612;5.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.09e-14,3;CL:0002188,2.74e-09,5;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:12603!2.64e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.89e-10!7;UBERON:0000989!1.02e-08!1;UBERON:0008811!1.02e-08!1;UBERON:0006258!1.02e-08!1;UBERON:0005876!1.02e-08!1;UBERON:0004874!1.02e-08!1;UBERON:0002370!1.78e-08!4;UBERON:0005058!1.78e-08!4;UBERON:0009113!1.78e-08!4;UBERON:0003295!1.78e-08!4;UBERON:0005562!1.78e-08!4;UBERON:0000974!3.39e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.22e-79;2!UBERON:0005058;5.22e-79;2!UBERON:0009113;5.22e-79;2!UBERON:0004177;1.99e-32;5!UBERON:0005057;1.99e-32;5!UBERON:0000074;5.38e-07;7!UBERON:0001229;5.38e-07;7!UBERON:0000077;7.24e-07;27!UBERON:0002405;7.24e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.31e-40,4;UBERON:0005058,3.31e-40,4;UBERON:0009113,3.31e-40,4;UBERON:0003295,3.31e-40,4;UBERON:0005562,3.31e-40,4;UBERON:0003351,3.11e-27,6;UBERON:0004177,1.61e-23,7;UBERON:0005057,1.61e-23,7;UBERON:0000974,8.13e-17,10;UBERON:0003408,8.13e-17,10;UBERON:0001042,8.13e-17,10;UBERON:0009145,8.13e-17,10;UBERON:0006562,2.17e-15,11;UBERON:0009722,2.17e-15,11;UBERON:0007690,2.17e-15,11;UBERON:0008814,8.11e-10,18;UBERON:0001557,2.36e-09,19;UBERON:0010532,5.38e-07,7;UBERON:0000074,5.38e-07,7;UBERON:0001229,5.38e-07,7;UBERON:0001230,5.38e-07,7;UBERON:0003220,5.38e-07,7;UBERON:0005749,5.38e-07,7;UBERON:0004199,5.38e-07,7;UBERON:0004209,5.38e-07,7;UBERON:0004198,5.38e-07,7 | |||
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|short_description=p@chr4:8237151..8237165,+ | |||
}} | }} |
Latest revision as of 07:21, 30 July 2015
Short description: | p@chr4:8237151..8237165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:8237151..8237165, + |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.09e-14 | 3 |
glomerular endothelial cell | 2.74e-09 | 5 |
glomerular cell | 5.38e-07 | 7 |
kidney corpuscule cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.31e-40 | 4 |
hemolymphoid system gland | 3.31e-40 | 4 |
thymic region | 3.31e-40 | 4 |
pharyngeal gland | 3.31e-40 | 4 |
thymus primordium | 3.31e-40 | 4 |
pharyngeal epithelium | 3.11e-27 | 6 |
hemopoietic organ | 1.61e-23 | 7 |
immune organ | 1.61e-23 | 7 |
neck | 8.13e-17 | 10 |
gland of gut | 8.13e-17 | 10 |
chordate pharynx | 8.13e-17 | 10 |
pharyngeal region of foregut | 8.13e-17 | 10 |
pharynx | 2.17e-15 | 11 |
entire pharyngeal arch endoderm | 2.17e-15 | 11 |
early pharyngeal endoderm | 2.17e-15 | 11 |
pharyngeal arch system | 8.11e-10 | 18 |
upper respiratory tract | 2.36e-09 | 19 |
primitive nephron | 5.38e-07 | 7 |
renal glomerulus | 5.38e-07 | 7 |
renal corpuscle | 5.38e-07 | 7 |
glomerular capsule | 5.38e-07 | 7 |
metanephric mesenchyme | 5.38e-07 | 7 |
glomerular tuft | 5.38e-07 | 7 |
S-shaped body | 5.38e-07 | 7 |
renal vesicle | 5.38e-07 | 7 |
comma-shaped body | 5.38e-07 | 7 |