FFCP PHASE1:Hg19::chr13:44454031..44454051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144811 | |EntrezGene=144811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26789 | |HGNC=26789 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV20,Q7Z395 | |UniProt=Q8IV20,Q7Z395 | ||
|association_with_transcript=62bp_to_ENST00000325686,NM_153218,uc001uzf.3_5end | |association_with_transcript=62bp_to_ENST00000325686,NM_153218,uc001uzf.3_5end | ||
|cluster_id=chr13:44454031..44454051,+ | |||
|description=CAGE_peak_2_at_LACC1_5end | |description=CAGE_peak_2_at_LACC1_5end | ||
|id=chr13:44454031..44454051,+ | |id=chr13:44454031..44454051,+ |
Latest revision as of 10:41, 17 September 2015
Short description: | p2@LACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LACC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000325686, NM_153218, uc001uzf.3_5end |
EntrezGene: | LACC1 |
HGNC: | 26789 |
UniProt: | Q8IV20Q7Z395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@LACC1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.76e-17 | 48 |
phagocyte | 3.76e-17 | 48 |
macrophage dendritic cell progenitor | 2.65e-15 | 61 |
granulocyte monocyte progenitor cell | 4.26e-15 | 67 |
monopoietic cell | 1.45e-14 | 59 |
monocyte | 1.45e-14 | 59 |
monoblast | 1.45e-14 | 59 |
promonocyte | 1.45e-14 | 59 |
myeloid lineage restricted progenitor cell | 2.61e-13 | 66 |
classical monocyte | 5.45e-13 | 42 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.30e-17 | 167 |
embryonic structure | 7.77e-16 | 564 |
germ layer | 6.20e-15 | 560 |
germ layer / neural crest | 6.20e-15 | 560 |
embryonic tissue | 6.20e-15 | 560 |
presumptive structure | 6.20e-15 | 560 |
germ layer / neural crest derived structure | 6.20e-15 | 560 |
epiblast (generic) | 6.20e-15 | 560 |
developing anatomical structure | 1.08e-13 | 581 |
bone marrow | 1.39e-13 | 76 |
Showing 1 to 10 of 29 entries