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FFCP PHASE1:Hg19::chr5:140501362..140501373,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:140501362..140501373,+
|DHSsupport=supported 
|short_description=p3@PCDHB4
|DPIdataset=robust
|description=CAGE_peak_3_at_PCDHB4_5end
|association_with_transcript=-207bp_to_ENST00000194152,NM_018938,uc003lip.1_5end
|EntrezGene=56131
|EntrezGene=56131
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=8689
|HGNC=8689
|TSSclassifier=strong
|UniProt=Q9Y5E5
|UniProt=Q9Y5E5
|association_with_transcript=-207bp_to_ENST00000194152,NM_018938,uc003lip.1_5end
|cluster_id=chr5:140501362..140501373,+
|coexpression_cluster_id=C3
|description=CAGE_peak_3_at_PCDHB4_5end
|id=chr5:140501362..140501373,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006601;2.88e-25;82!UBERON:0010122;2.41e-10;2!UBERON:0006241;3.67e-07;3!UBERON:0003057;3.67e-07;3!UBERON:0002532;6.30e-07;206!UBERON:0010316;6.30e-07;206!UBERON:0006215;7.12e-07;3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.79e-56;34!UBERON:0001869;1.61e-54;32!UBERON:0003528;7.58e-53;34!UBERON:0002020;7.58e-53;34!UBERON:0002619;7.87e-53;22!UBERON:0001950;3.73e-51;20!UBERON:0002791;5.97e-49;32!UBERON:0000956;2.85e-46;25!UBERON:0000203;2.85e-46;25!UBERON:0002780;1.03e-43;41!UBERON:0001890;1.03e-43;41!UBERON:0000073;1.17e-43;53!UBERON:0002616;1.17e-43;53!UBERON:0001017;3.34e-30;75!UBERON:0000200;9.46e-27;6!UBERON:0000955;1.30e-26;68!UBERON:0001016;2.37e-26;83!UBERON:0002298;8.53e-19;6!UBERON:0002420;1.35e-17;9!UBERON:0007245;1.35e-17;9!UBERON:0010009;1.35e-17;9!UBERON:0010011;1.35e-17;9!UBERON:0000454;1.35e-17;9!UBERON:0004733;1.46e-17;12!UBERON:0002028;1.46e-17;12!UBERON:0004732;3.87e-16;13!UBERON:0001871;8.91e-16;6!UBERON:0001872;7.66e-15;5!UBERON:0000349;7.66e-15;5!UBERON:0007023;1.17e-14;114!UBERON:0001870;1.62e-14;3!UBERON:0001896;1.95e-14;3!UBERON:0005290;1.95e-14;3!UBERON:0000125;1.89e-12;9!UBERON:0002308;1.89e-12;9!UBERON:0000369;6.01e-11;4!UBERON:0002435;6.01e-11;4!UBERON:0000204;6.01e-11;4!UBERON:0009663;1.25e-10;7!UBERON:0002702;2.00e-10;2!UBERON:0001873;2.41e-10;2!UBERON:0002771;6.59e-10;2!UBERON:0001876;6.59e-10;2!UBERON:0011216;2.84e-09;132!UBERON:0002021;1.37e-08;5!UBERON:0002680;4.25e-08;9!UBERON:0001895;4.25e-08;9!UBERON:0010314;7.43e-08;132!UBERON:0002240;3.67e-07;3!UBERON:0005174;3.67e-07;3!UBERON:0005383;3.67e-07;3!UBERON:0001137;3.67e-07;3!UBERON:0005382;3.67e-07;3!UBERON:0000988;7.12e-07;3
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|short_description=p3@PCDHB4
}}
}}

Latest revision as of 03:19, 25 September 2015

Short description:p3@PCDHB4
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_PCDHB4_5end
Coexpression cluster:C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala
Association with transcript: -207bp_to_ENST00000194152, NM_018938, uc003lip.1_5end
EntrezGene:PCDHB4
HGNC: 8689
UniProt: Q9Y5E5
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data