FFCP PHASE1:Hg19::chr5:147763539..147763586,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:147763539..147763586,+
|short_description=p1@FBXO38
|description=CAGE_peak_1_at_FBXO38_5end
|association_with_transcript=0bp_to_ENST00000296701,ENST0000039...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81545 | |EntrezGene=81545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28844 | |HGNC=28844 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PIJ6 | |UniProt=Q6PIJ6 | ||
|association_with_transcript=0bp_to_ENST00000296701,ENST00000394370,ENST00000508326,ENST00000509411,ENST00000511080,NM_030793,NM_205836,uc003lpf.1,uc003lpg.1,uc003lph.2_5end | |||
|cluster_id=chr5:147763539..147763586,+ | |||
|coexpression_cluster_id=C509 | |||
|description=CAGE_peak_1_at_FBXO38_5end | |||
|id=chr5:147763539..147763586,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.54e-29!140;CL:0002087!5.44e-25!119;CL:0002057!4.05e-24!42;CL:0002031!4.65e-24!124;CL:0000860!5.74e-23!45;CL:0000766!7.54e-22!76;CL:0000037!3.35e-20!172;CL:0000566!3.35e-20!172;CL:0002032!5.66e-19!165;CL:0000837!5.66e-19!165;CL:0000988!1.53e-18!182;CL:0000839!1.62e-18!70;CL:0002194!8.43e-18!63;CL:0000576!8.43e-18!63;CL:0000040!8.43e-18!63;CL:0000559!8.43e-18!63;CL:0002009!1.12e-16!65;CL:0000557!1.49e-16!71;CL:0000763!8.82e-12!112;CL:0000049!8.82e-12!112;CL:0000134!2.37e-09!358;CL:0002320!1.62e-08!365;CL:0000219!8.34e-08!390;CL:0000542!2.12e-07!53;CL:0000051!2.12e-07!53;CL:0000838!2.34e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.11e-19;33!CL:0002057;8.11e-19;33!CL:0000576;2.55e-14;48!CL:0000473;1.16e-13;39!CL:0000234;1.16e-13;39!CL:0000766;1.84e-11;69!CL:0002087;3.31e-09;104!CL:0000738;2.41e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.49e-30,136;CL:0002087,8.46e-26,115;CL:0002031,8.39e-25,120;CL:0000860,4.05e-24,42;CL:0002057,4.05e-24,42;CL:0000766,5.37e-23,72;CL:0000473,3.72e-21,48;CL:0000234,3.72e-21,48;CL:0000037,1.23e-20,168;CL:0000839,1.42e-19,66;CL:0000988,2.03e-19,177;CL:0002032,2.11e-19,161;CL:0000837,2.11e-19,161;CL:0002194,6.16e-19,59;CL:0000576,6.16e-19,59;CL:0000040,6.16e-19,59;CL:0000559,6.16e-19,59;CL:0002009,1.05e-17,61;CL:0000557,1.75e-17,67;CL:0000763,3.45e-12,108;CL:0000049,3.45e-12,108;CL:0000134,1.51e-09,354;CL:0002320,1.07e-08,361;CL:0000219,5.73e-08,386;CL:0000542,2.12e-07,53;CL:0000051,2.12e-07,53;CL:0000838,2.34e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.63e-20!102;UBERON:0003061!3.63e-20!102;UBERON:0002193!3.91e-20!112;UBERON:0002371!5.27e-14!80;UBERON:0001474!2.81e-12!86;UBERON:0004765!3.04e-11!101;UBERON:0001434!3.04e-11!101;UBERON:0002405!1.89e-10!115;UBERON:0002384!9.12e-08!375;UBERON:0000178!2.48e-07!15;UBERON:0000179!2.48e-07!15;UBERON:0000463!2.48e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.88e-07;15!UBERON:0000179;1.88e-07;15!UBERON:0000463;1.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.12e-21,98;UBERON:0003061,6.12e-21,98;UBERON:0002193,7.85e-21,108;UBERON:0002405,3.07e-15,93;UBERON:0002371,1.07e-14,76;UBERON:0001474,7.74e-13,82;UBERON:0004765,5.56e-12,90;UBERON:0001434,5.27e-11,100;UBERON:0002384,6.20e-08,371;UBERON:0000178,2.48e-07,15;UBERON:0000179,2.48e-07,15;UBERON:0000463,2.48e-07,15 | |||
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| ||
|short_description=p1@FBXO38 | |||
}} | }} |
Latest revision as of 00:12, 16 September 2015
Short description: | p1@FBXO38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXO38_5end |
Coexpression cluster: | C509_Neutrophils_Eosinophils_CD14_Whole_CD34_CD19_Peripheral |
Association with transcript: | 0bp_to_ENST00000296701, ENST00000394370, ENST00000508326, ENST00000509411, ENST00000511080, NM_030793, NM_205836, uc003lpf.1, uc003lpg.1, uc003lph.2_5end |
EntrezGene: | FBXO38 |
HGNC: | 28844 |
UniProt: | Q6PIJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.49e-30 | 136 |
nongranular leukocyte | 8.46e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 8.39e-25 | 120 |
classical monocyte | 4.05e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.05e-24 | 42 |
myeloid leukocyte | 5.37e-23 | 72 |
defensive cell | 3.72e-21 | 48 |
phagocyte | 3.72e-21 | 48 |
hematopoietic stem cell | 1.23e-20 | 168 |
myeloid lineage restricted progenitor cell | 1.42e-19 | 66 |
hematopoietic cell | 2.03e-19 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-19 | 161 |
monopoietic cell | 6.16e-19 | 59 |
monocyte | 6.16e-19 | 59 |
monoblast | 6.16e-19 | 59 |
promonocyte | 6.16e-19 | 59 |
macrophage dendritic cell progenitor | 1.05e-17 | 61 |
granulocyte monocyte progenitor cell | 1.75e-17 | 67 |
myeloid cell | 3.45e-12 | 108 |
common myeloid progenitor | 3.45e-12 | 108 |
mesenchymal cell | 1.51e-09 | 354 |
connective tissue cell | 1.07e-08 | 361 |
motile cell | 5.73e-08 | 386 |
lymphocyte | 2.12e-07 | 53 |
common lymphoid progenitor | 2.12e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.34e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.12e-21 | 98 |
blood island | 6.12e-21 | 98 |
hemolymphoid system | 7.85e-21 | 108 |
immune system | 3.07e-15 | 93 |
bone marrow | 1.07e-14 | 76 |
bone element | 7.74e-13 | 82 |
skeletal element | 5.56e-12 | 90 |
skeletal system | 5.27e-11 | 100 |
connective tissue | 6.20e-08 | 371 |
blood | 2.48e-07 | 15 |
haemolymphatic fluid | 2.48e-07 | 15 |
organism substance | 2.48e-07 | 15 |