FFCP PHASE1:Hg19::chr5:179720177..179720223,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:179720177..179720223,+
|short_description=p1@ENST00000504573
|description=CAGE_peak_1_at_ENST00000504573_5end
|association_with_transcript=-21bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000504573_5end | |||
|cluster_id=chr5:179720177..179720223,+ | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_1_at_ENST00000504573_5end | |||
|id=chr5:179720177..179720223,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.61e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.41e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.72e-16;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;8.17e-17;2!DOID:3908;3.01e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.75e-17,2;DOID:3908,2.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.58e-14!82;UBERON:0002616!1.10e-13!59;UBERON:0005743!1.47e-13!86;UBERON:0001049!7.69e-13!57;UBERON:0005068!7.69e-13!57;UBERON:0006241!7.69e-13!57;UBERON:0007135!7.69e-13!57;UBERON:0000955!1.13e-12!69;UBERON:0006238!1.13e-12!69;UBERON:0000073!6.32e-12!94;UBERON:0001016!6.32e-12!94;UBERON:0003080!2.03e-11!42;UBERON:0002020!2.06e-11!34;UBERON:0003528!2.06e-11!34;UBERON:0001893!2.46e-11!34;UBERON:0002780!8.96e-11!41;UBERON:0001890!8.96e-11!41;UBERON:0006240!8.96e-11!41;UBERON:0002791!1.06e-10!33;UBERON:0001950!1.33e-10!20;UBERON:0001869!1.89e-10!32;UBERON:0002346!3.09e-10!90;UBERON:0003075!4.58e-10!86;UBERON:0007284!4.58e-10!86;UBERON:0002619!5.24e-10!22;UBERON:0001737!1.15e-09!9;UBERON:0000956!4.31e-09!25;UBERON:0000203!4.31e-09!25;UBERON:0003056!5.14e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.15e-30;9!UBERON:0001557;2.15e-30;9!UBERON:0004903;8.17e-17;2!UBERON:0002173;8.17e-17;2!UBERON:0002186;8.17e-17;2!UBERON:0000072;4.68e-13;37!UBERON:0004821;1.61e-11;3!UBERON:0007499;1.61e-11;3!UBERON:0003215;1.61e-11;3!UBERON:0010368;1.61e-11;3!UBERON:0009911;1.61e-11;3!UBERON:0002299;1.61e-11;3!UBERON:0006524;1.61e-11;3!UBERON:0008874;1.61e-11;3!UBERON:0002169;1.61e-11;3!UBERON:0004894;1.61e-11;3!UBERON:0000065;7.23e-10;44!UBERON:0003112;5.09e-09;1!UBERON:0000996;5.09e-09;1!UBERON:0011158;5.09e-09;1!UBERON:0003128;5.09e-09;1!UBERON:0001703;5.09e-09;1!UBERON:0002241;5.09e-09;1!UBERON:0009856;7.41e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.54e-30,9;UBERON:0004903,6.75e-17,2;UBERON:0002173,6.75e-17,2;UBERON:0002186,6.75e-17,2;UBERON:0008947,4.27e-15,38;UBERON:0003258,4.27e-15,38;UBERON:0001557,3.80e-14,19;UBERON:0000072,6.00e-12,47;UBERON:0004821,1.41e-11,3;UBERON:0003215,1.41e-11,3;UBERON:0010368,1.41e-11,3;UBERON:0009911,1.41e-11,3;UBERON:0002299,1.41e-11,3;UBERON:0006524,1.41e-11,3;UBERON:0008874,1.41e-11,3;UBERON:0002169,1.41e-11,3;UBERON:0004894,1.41e-11,3;UBERON:0000065,3.18e-10,54;UBERON:0000996,2.22e-09,1;UBERON:0003112,3.88e-09,1;UBERON:0011158,3.88e-09,1;UBERON:0003128,3.88e-09,1;UBERON:0001703,3.88e-09,1;UBERON:0002241,3.88e-09,1;UBERON:0004761,3.88e-09,1;UBERON:0009617,3.88e-09,1;UBERON:0001004,4.25e-07,74 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0.730310090387373,0,0,0.408001382488506,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0.167186495390678,0.651844533267181,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0,0,0,0.534880391567015,0.144824403882799,0,1.34140171940727,0,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0.490385709340376,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,1.18306800039844,1.01150814046861,1.20505514941741,1.43382164552112,0.653638332277218,0.71181185733329,1.61797569792197,0.98110732562673,2.69323009862473,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0.425325291727159,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.862510299438069,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.348631135379878,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,1.14378116354295,0.511795582622668,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0.48763373908959,1.21856744815642,0,0,0,0,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0.213425530045242,0.318852545457645,0,0,0.211673582723883,0.649243880549111,0,0.684704037099577,0.156679895773023,0,0.169291777801603,0,0.403599414382095,0,0,0,0.223676107892416,0.333698283423817,0.19538809540204,0,1.23087398947712,0.540911356951966,0,0,2.43282702530686,0.146508179271894,0.606802608747567,0,28.9818869742541,0,0,0,0.994147647766298,0.281338832821026,0,0.16480387422676,0,0,0,0.251932747854276,0.102268682502155,0,0,0.629078458031288,0.179021174675609,0,0,0,0,0,0.185536196323703,3.99227596002388,0,0,0.724999575434793,0,1.27126825146383,0.236387681767936,0.689486746482929,0.291604613383254,0,0,0.361789315876224,0,0,0.295547618953547,0.87754158861589,0.980446171670911,0,0,0.113942055847001,0,0.0897576444097721,0.217294743844016,0,0,0,1.02193298195737,0.31396051279005,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0,1.22206028986725,0.296521128680622,0.494255755786011,0.313265848516366,0.134802265961354,0,0.468528891450678,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0,0.330991955875499,1.2557316736289,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.387025325156341,0.219267951258557,0.328461828212837,0,0,0.225980740780532,0.137041924646751,0,0.696418755514666,0,0.400794101257669,0,0,0,0.229073192331831,0,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0,0,0,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0,0.0674035438541849,0,0.254019996197353,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0.607495566580247,0,0,0,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.904980694530854,0.13223260174269,0.513260513652988,0,0,0,0,0.496166021811951,0.197611631897944,0.243585196761792,0,0,0,0,0,0,1.77213635993397,0.854183854313742,0.3755727921195,0,0.221858103073705,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0.181848659202559,0.214821114084977,0,0,0,0.343395705182793,0,0,0.963099152036517,1.50109113962448,0,0,0,0.734210113519403,0,0.308801447160972,0,0,0,0.1689424406530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| ||
|short_description=p1@ENST00000504573 | |||
}} | }} |
Latest revision as of 13:57, 30 July 2015
Short description: | p1@ENST00000504573 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000504573_5end |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | -21bp_to_ENST00000504573_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.41e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.54e-30 | 9 |
bronchoalveolar duct junction | 6.75e-17 | 2 |
alveolar duct | 6.75e-17 | 2 |
bronchiole | 6.75e-17 | 2 |
respiratory primordium | 4.27e-15 | 38 |
endoderm of foregut | 4.27e-15 | 38 |
upper respiratory tract | 3.80e-14 | 19 |
segment of respiratory tract | 6.00e-12 | 47 |
pulmonary alveolus epithelium | 1.41e-11 | 3 |
alveolus | 1.41e-11 | 3 |
pulmonary lobule | 1.41e-11 | 3 |
lobule | 1.41e-11 | 3 |
alveolus of lung | 1.41e-11 | 3 |
alveolar system | 1.41e-11 | 3 |
pulmonary acinus | 1.41e-11 | 3 |
alveolar sac | 1.41e-11 | 3 |
alveolar wall | 1.41e-11 | 3 |
respiratory tract | 3.18e-10 | 54 |
vagina | 2.22e-09 | 1 |
olfactory region | 3.88e-09 | 1 |
primary subdivision of skull | 3.88e-09 | 1 |
cranium | 3.88e-09 | 1 |
neurocranium | 3.88e-09 | 1 |
chondrocranium | 3.88e-09 | 1 |
cartilaginous neurocranium | 3.88e-09 | 1 |
head paraxial mesoderm | 3.88e-09 | 1 |
respiratory system | 4.25e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.75e-17 | 2 |
non-small cell lung carcinoma | 2.79e-07 | 5 |