FFCP PHASE1:Hg19::chr5:35230569..35230602,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:35230569..35230602,-
|short_description=p1@PRLR
|description=CAGE_peak_1_at_PRLR_5end
|association_with_transcript=0bp_to_ENST00000515839_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5618 | |EntrezGene=5618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9446 | |HGNC=9446 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAN9 | |UniProt=D6RAN9 | ||
|association_with_transcript=0bp_to_ENST00000515839_5end | |||
|cluster_id=chr5:35230569..35230602,- | |||
|coexpression_cluster_id=C4497 | |||
|description=CAGE_peak_1_at_PRLR_5end | |||
|id=chr5:35230569..35230602,- | |||
|ontology_enrichment_celltype=CL:0002057!3.34e-30!42;CL:0000860!7.48e-27!45;CL:0002009!1.38e-23!65;CL:0002194!1.40e-23!63;CL:0000576!1.40e-23!63;CL:0000040!1.40e-23!63;CL:0000559!1.40e-23!63;CL:0000557!9.70e-22!71;CL:0000839!7.63e-20!70;CL:0000766!1.04e-19!76;CL:0002087!7.49e-11!119;CL:0000763!3.25e-10!112;CL:0000049!3.25e-10!112;CL:0000738!3.62e-09!140;CL:0002031!6.31e-09!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.63e-34;33!CL:0002057;4.63e-34;33!CL:0000576;1.83e-29;48!CL:0000473;3.65e-24;39!CL:0000234;3.65e-24;39!CL:0000766;2.60e-16;69!CL:0000763;6.84e-08;100!CL:0002393;1.44e-07;6!CL:0002397;1.44e-07;6!CL:0002087;9.97e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.45e-43,42;CL:0002057,1.45e-43,42;CL:0000473,5.73e-38,48;CL:0000234,5.73e-38,48;CL:0002009,7.18e-36,61;CL:0002194,1.27e-35,59;CL:0000576,1.27e-35,59;CL:0000040,1.27e-35,59;CL:0000559,1.27e-35,59;CL:0000557,6.54e-33,67;CL:0000766,1.34e-30,72;CL:0000839,3.54e-30,66;CL:0000763,3.10e-19,108;CL:0000049,3.10e-19,108;CL:0002087,6.69e-16,115;CL:0000738,1.24e-14,136;CL:0002031,3.44e-13,120;CL:0000037,2.83e-11,168;CL:0000988,6.87e-10,177;CL:0002032,1.18e-09,161;CL:0000837,1.18e-09,161;CL:0002393,1.03e-07,9;CL:0002397,1.03e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.66e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.84e-07;4!DOID:1612;4.84e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.83e-07,4;DOID:1612,4.83e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.53e-18!86;UBERON:0002371!9.68e-18!80;UBERON:0002405!1.51e-15!115;UBERON:0002390!1.90e-15!102;UBERON:0003061!1.90e-15!102;UBERON:0000062!5.73e-15!511;UBERON:0007023!3.10e-14!115;UBERON:0004765!1.57e-13!101;UBERON:0001434!1.57e-13!101;UBERON:0002193!1.47e-12!112;UBERON:0000468!3.79e-09!659;UBERON:0000922!4.50e-09!612;UBERON:0002050!2.13e-07!605;UBERON:0005423!2.13e-07!605;UBERON:0000923!4.50e-07!604;UBERON:0005291!4.50e-07!604;UBERON:0006598!4.50e-07!604;UBERON:0002532!4.50e-07!604;UBERON:0000480!7.92e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-28,76;UBERON:0001474,5.01e-25,82;UBERON:0002390,1.47e-22,98;UBERON:0003061,1.47e-22,98;UBERON:0004765,2.18e-21,90;UBERON:0002405,2.43e-21,93;UBERON:0002193,6.31e-19,108;UBERON:0001434,1.05e-17,100;UBERON:0003081,9.11e-09,203;UBERON:0000922,4.19e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.83973783769224,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,3.74425688164961,4.18713006194723,3.22714203386085,1.96682138424452,2.68680578668049,3.40595471295367,0,0,0,0,0,1.17440175733939,9.41792194504192,16.0435557976113,13.6716848550987,1.34349284543955,0.971680998056939,2.57575567634187,3.34415949192999,5.66813915533214,4.36651310138069,10.9241647345672,17.2690512969167,8.05236564327269,9.49384894663097,7.42866048934392,6.3850202069918,11.3766074643084,7.74581620300591,5.41705946377367,4.1413314699373,4.91231070104122,3.37085226667627,5.20342617030534,3.20929027076094,3.19668562899521,11.8746468067218,10.7710375115681,1.27867425159808,4.93355705668593,8.5107783703671,8.09668923694247,5.7787193009051,11.9941071236646,8.68755378820467,5.44859552370032,5.52416453981347,6.0127853613768,1.90129757680748,2.12604299965044,2.30624510059213,3.93150209012733,3.60424542819615,6.10757229448904,1.42506371870624,0.59675003159727,1.46131323011707,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,2.80254281490768,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0,0.0945348171640679,0,0,6.81091192588106,0,0,0,0,0.26591592103773,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0.604512589365842,0,0,0,0,0.487894824518382,0.530119073285941,1.16193942869518,1.24393266018445,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,5.31710916013264,0,2.09080345523293,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,17.3844967551041,13.735778593518,0.492434012174795,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,2.71310802695722,0.823240336780769,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.260650843404249,0,0.343143423810856,1.44737618286021,4.74571241800957,2.24127871387233,0.909382714338778,0,1.5119514666484,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,22.7720635741466,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0.982490410131212,0,0,0,0,0,0,0,0,0,21.3706427763289,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,3.02699560786571,71.9680141696651,0,5.53033375755224,4.02616994206349,2.66958626739054,0,0,0,0,0,0,12.9126972881672,0.293016358543788,0,0,0,4.05865624054073,0.890894042497916,2.76444631889309,0,3.65740482667333,0.222617410045812,0,0,0.19924798825107,0,0,0,0.615424027305347,0,0,1.07412704805365,0,0.690503839458535,0,0,1.93866549219044,0.278304294485554,1.99613798001194,109.119231894713,63.4084999972419,8.69999490521752,0,0.762760950878299,9.45550727071745,0,0,0,0,2.05013945663194,0,0.110579259931225,0,6.14279112031123,0,9.62023835522363,34.5506660682049,10.4826691379241,2.53620294826866,0,7.38802129069655,21.3730777020386,1.09917112082235,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,1.50377859655677,3.66618086960175,0,0,0,5.52689290441552,0,0.234264445725339,0,0.391329237864179,0,67.4739328872458,4.83962864194656,0.30607276163049,0.695052375913368,0,0,1.32930774541437,0,0.313932918407225,1.19472429772959,0,0,0,0,0,13.9781334593624,0,0,0,0,1.06687918137261,0,1.58186518546373,0,0,0.189932387867636,4.30213042016567,0.320635281006135,2.34798294213288,1.79828648623917,2.73771792592801,0,34.4905945702549,0,0,0,0,0,0,0,0,0.136905378891993,5.10986352267889,0,0,1.39641200636127,0.916641696046735,0,3.19486400798386,0,0,1.07493555978762,0,1.16495949527454,1.02418136999391,0.494495150286999,0.337017719270924,0.0984274815147488,0,0,3.81369537112412,0.321506296930038,0,0.415440338029185,0,7.7380195455795,0.121499113316049,0,3.30983970656632,7.13382398635974,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,1.46552233678082,7.95041333473328,0.517131825446202,0.52893040697076,0.171086837884329,0,0.106787412567695,1.10043013569766,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,53.3270551991766,20.4109454827808,3.72578417648301,0,0.124980407962107,0.151649117541648,0,0,7.02502358710322,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.24473670450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| ||
|short_description=p1@PRLR | |||
}} | }} |
Latest revision as of 18:16, 17 September 2015
Short description: | p1@PRLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRLR_5end |
Coexpression cluster: | C4497_breast_seminal_placenta_acute_ductus_medulla_umbilical |
Association with transcript: | 0bp_to_ENST00000515839_5end |
EntrezGene: | PRLR |
HGNC: | 9446 |
UniProt: | D6RAN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.45e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.45e-43 | 42 |
defensive cell | 5.73e-38 | 48 |
phagocyte | 5.73e-38 | 48 |
macrophage dendritic cell progenitor | 7.18e-36 | 61 |
monopoietic cell | 1.27e-35 | 59 |
monocyte | 1.27e-35 | 59 |
monoblast | 1.27e-35 | 59 |
promonocyte | 1.27e-35 | 59 |
granulocyte monocyte progenitor cell | 6.54e-33 | 67 |
myeloid leukocyte | 1.34e-30 | 72 |
myeloid lineage restricted progenitor cell | 3.54e-30 | 66 |
myeloid cell | 3.10e-19 | 108 |
common myeloid progenitor | 3.10e-19 | 108 |
nongranular leukocyte | 6.69e-16 | 115 |
leukocyte | 1.24e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 3.44e-13 | 120 |
hematopoietic stem cell | 2.83e-11 | 168 |
hematopoietic cell | 6.87e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.18e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-09 | 161 |
intermediate monocyte | 1.03e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-28 | 76 |
bone element | 5.01e-25 | 82 |
hematopoietic system | 1.47e-22 | 98 |
blood island | 1.47e-22 | 98 |
skeletal element | 2.18e-21 | 90 |
immune system | 2.43e-21 | 93 |
hemolymphoid system | 6.31e-19 | 108 |
skeletal system | 1.05e-17 | 100 |
lateral plate mesoderm | 9.11e-09 | 203 |
embryo | 4.19e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.83e-07 | 4 |
breast cancer | 4.83e-07 | 4 |