FFCP PHASE1:Hg19::chr6:12313721..12313725,-: Difference between revisions
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|id=chr6:12313721..12313725,-
|short_description=p@chr6:12313721..12313725,-
|description=CAGE_peak_at_chr6:12313721..12313725,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:12313721..12313725,- | |||
|description=CAGE_peak_at_chr6:12313721..12313725,- | |||
|id=chr6:12313721..12313725,- | |||
|ontology_enrichment_celltype=CL:0000066!9.37e-30!254;CL:0002076!5.80e-21!43;CL:0000223!5.49e-14!59;CL:0002159!9.22e-12!13;CL:0002368!6.44e-11!13;CL:0000622!7.74e-11!5;CL:0002621!4.81e-10!3;CL:0000154!4.98e-09!6;CL:0002251!3.73e-08!21;CL:0000317!3.76e-08!2;CL:1000448!3.76e-08!2;CL:0002308!3.76e-08!2;CL:0002140!3.76e-08!2;CL:0000575!1.33e-07!2;CL:0002536!1.61e-07!2;CL:0000362!4.26e-07!8;CL:0000063!8.18e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000317;2.16e-19;2!CL:1000448;2.16e-19;2!CL:0002308;2.16e-19;2!CL:0002140;2.16e-19;2!CL:0002159;1.23e-10;14!CL:0000362;1.01e-09;9!CL:0000622;2.63e-08;5!CL:0000154;4.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.38e-20,2;CL:1000448,9.38e-20,2;CL:0002308,9.38e-20,2;CL:0002140,9.38e-20,2;CL:0000066,9.26e-13,253;CL:0002159,1.03e-10,14;CL:0000362,6.68e-10,9;CL:0000622,1.89e-08,5;CL:0000154,3.55e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.99e-24;29!UBERON:0008425;2.28e-10;1 | |||
|ontology_enrichment_disease=DOID:305!5.18e-16!106;DOID:0050687!5.25e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.70e-10;4!DOID:1612;5.70e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.16e-12,106;DOID:5093,4.35e-10,4;DOID:1612,4.35e-10,4;DOID:0050687,1.66e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.38e-29!9;UBERON:0001004!2.50e-19!72;UBERON:0008947!7.38e-18!38;UBERON:0003258!7.38e-18!38;UBERON:0004119!2.28e-17!169;UBERON:0000925!2.28e-17!169;UBERON:0006595!2.28e-17!169;UBERON:0000065!3.68e-17!53;UBERON:0000072!4.70e-14!46;UBERON:0001557!6.57e-13!19;UBERON:0000077!6.16e-12!130;UBERON:0001007!1.82e-11!155;UBERON:0001555!1.82e-11!155;UBERON:0007026!1.82e-11!155;UBERON:0004921!1.07e-10!129;UBERON:0004185!1.07e-10!129;UBERON:0001041!3.72e-10!98;UBERON:0001949!4.81e-10!3;UBERON:0002419!3.76e-08!2;UBERON:0007771!3.76e-08!2;UBERON:0003297!3.76e-08!2;UBERON:0001821!3.76e-08!2;UBERON:0003487!3.76e-08!2;UBERON:0001820!3.76e-08!2;UBERON:0005089!3.76e-08!2;UBERON:0005088!3.76e-08!2;UBERON:0000064!4.55e-08!219;UBERON:0005911!8.70e-08!82;UBERON:0005631!1.17e-07!14;UBERON:0000158!1.17e-07!14;UBERON:0004807!3.14e-07!28;UBERON:0000063!3.17e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.35e-79;9!UBERON:0001557;1.35e-79;9!UBERON:0002419;2.16e-19;2!UBERON:0007771;2.16e-19;2!UBERON:0003297;2.16e-19;2!UBERON:0001821;2.16e-19;2!UBERON:0003487;2.16e-19;2!UBERON:0001820;2.16e-19;2!UBERON:0000065;3.51e-18;44!UBERON:0000072;2.22e-17;37!UBERON:0004913;8.93e-11;1!UBERON:0003703;8.93e-11;1!UBERON:0001174;8.93e-11;1!UBERON:0004914;8.93e-11;1!UBERON:0001004;2.14e-09;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.83e-79,9;UBERON:0001557,8.48e-37,19;UBERON:0002419,9.38e-20,2;UBERON:0007771,9.38e-20,2;UBERON:0003297,9.38e-20,2;UBERON:0001821,9.38e-20,2;UBERON:0003487,9.38e-20,2;UBERON:0001820,9.38e-20,2;UBERON:0005089,9.38e-20,2;UBERON:0005088,9.38e-20,2;UBERON:0008947,8.03e-18,38;UBERON:0003258,8.03e-18,38;UBERON:0000065,3.58e-15,54;UBERON:0000072,3.54e-14,47;UBERON:0004913,8.95e-11,1;UBERON:0003703,8.95e-11,1;UBERON:0001174,8.95e-11,1;UBERON:0004914,8.95e-11,1;UBERON:0001004,1.13e-10,74;UBERON:0001048,3.21e-10,160;UBERON:0001041,7.67e-09,87;UBERON:0004119,1.09e-08,160;UBERON:0000925,1.09e-08,160;UBERON:0006595,1.09e-08,160 | |||
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| ||
|short_description=p@chr6:12313721..12313725,- | |||
}} | }} |
Latest revision as of 18:58, 30 July 2015
Short description: | p@chr6:12313721..12313725, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12313721..12313725, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.38e-20 | 2 |
epithelial cell of sweat gland | 9.38e-20 | 2 |
epithelial cell of skin gland | 9.38e-20 | 2 |
acinar cell of sebaceous gland | 9.38e-20 | 2 |
epithelial cell | 9.26e-13 | 253 |
general ecto-epithelial cell | 1.03e-10 | 14 |
epidermal cell | 6.68e-10 | 9 |
acinar cell | 1.89e-08 | 5 |
protein secreting cell | 3.55e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.83e-79 | 9 |
upper respiratory tract | 8.48e-37 | 19 |
skin gland | 9.38e-20 | 2 |
epidermis gland | 9.38e-20 | 2 |
gland of integumental system | 9.38e-20 | 2 |
sebaceous gland | 9.38e-20 | 2 |
skin sebaceous gland | 9.38e-20 | 2 |
sweat gland | 9.38e-20 | 2 |
sweat gland placode | 9.38e-20 | 2 |
sebaceous gland placode | 9.38e-20 | 2 |
respiratory primordium | 8.03e-18 | 38 |
endoderm of foregut | 8.03e-18 | 38 |
respiratory tract | 3.58e-15 | 54 |
segment of respiratory tract | 3.54e-14 | 47 |
hepatopancreatic ampulla | 8.95e-11 | 1 |
extrahepatic bile duct | 8.95e-11 | 1 |
common bile duct | 8.95e-11 | 1 |
duodenal papilla | 8.95e-11 | 1 |
respiratory system | 1.13e-10 | 74 |
primordium | 3.21e-10 | 160 |
foregut | 7.67e-09 | 87 |
endoderm-derived structure | 1.09e-08 | 160 |
endoderm | 1.09e-08 | 160 |
presumptive endoderm | 1.09e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.16e-12 | 106 |
thoracic cancer | 4.35e-10 | 4 |
breast cancer | 4.35e-10 | 4 |
cell type cancer | 1.66e-08 | 143 |