FFCP PHASE1:Hg19::chr1:198290080..198290094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=140609 | |EntrezGene=140609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=13386 | |HGNC=13386 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=182bp_to_AL080111_5end | |association_with_transcript=182bp_to_AL080111_5end | ||
|cluster_id=chr1:198290080..198290094,+ | |||
|description=CAGE_peak_23_at_NEK7_5end | |description=CAGE_peak_23_at_NEK7_5end | ||
|id=chr1:198290080..198290094,+ | |id=chr1:198290080..198290094,+ |
Latest revision as of 14:10, 19 September 2015
Short description: | p23@NEK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NEK7_5end |
Coexpression cluster: | NA |
Association with transcript: | 182bp_to_AL080111_5end |
EntrezGene: | NEK7 |
HGNC: | 13386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p23@NEK7 |
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0.0
1.0
2.0
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4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 6.56e-32 | 6 |
sensory epithelial cell | 6.56e-32 | 6 |
olfactory epithelial cell | 6.56e-32 | 6 |
multinucleate cell | 3.76e-13 | 1 |
myotube | 3.76e-13 | 1 |
neurecto-epithelial cell | 8.91e-10 | 20 |
columnar/cuboidal epithelial cell | 2.74e-07 | 27 |
bronchial smooth muscle cell | 3.93e-07 | 2 |
bone matrix secreting cell | 4.98e-07 | 2 |
osteocyte | 4.98e-07 | 2 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
penis | 2.06e-13 | 1 |
intromittent organ | 2.06e-13 | 1 |
lateral plate mesenchyme | 2.06e-13 | 1 |
undifferentiated genital tubercle | 2.06e-13 | 1 |
somatopleure | 2.06e-13 | 1 |
heart left ventricle | 4.77e-13 | 1 |
cardiac ventricle | 4.77e-13 | 1 |
future cardiac ventricle | 4.77e-13 | 1 |
dorsal plus ventral thalamus | 3.09e-07 | 2 |
thalamic complex | 3.09e-07 | 2 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 2.62e-13 | 1 |
connective tissue cancer | 1.47e-08 | 6 |
musculoskeletal system cancer | 1.47e-08 | 6 |
giant cell tumor | 4.98e-07 | 2 |
bone giant cell tumor | 4.98e-07 | 2 |
histiocytoma | 5.28e-07 | 2 |
malignant fibroxanthoma | 5.28e-07 | 2 |
Showing 1 to 7 of 7 entries