FFCP PHASE1:Hg19::chr14:35873101..35873119,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=4792 | |EntrezGene=4792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7797 | |HGNC=7797 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=G3V286 | |UniProt=G3V286 | ||
|association_with_transcript=226bp_to_ENST00000557389,uc001wte.3_5end | |association_with_transcript=226bp_to_ENST00000557389,uc001wte.3_5end | ||
|cluster_id=chr14:35873101..35873119,- | |||
|description=CAGE_peak_6_at_NFKBIA_5end | |description=CAGE_peak_6_at_NFKBIA_5end | ||
|id=chr14:35873101..35873119,- | |id=chr14:35873101..35873119,- |
Latest revision as of 21:10, 19 September 2015
Short description: | p6@NFKBIA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFKBIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 226bp_to_ENST00000557389, uc001wte.3_5end |
EntrezGene: | NFKBIA |
HGNC: | 7797 |
UniProt: | G3V286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@NFKBIA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.33e-11 | 136 |
myeloid leukocyte | 9.44e-11 | 72 |
classical monocyte | 5.96e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.96e-10 | 42 |
hematopoietic lineage restricted progenitor cell | 2.99e-09 | 120 |
granulocyte monocyte progenitor cell | 1.91e-08 | 67 |
myeloid lineage restricted progenitor cell | 3.70e-08 | 66 |
defensive cell | 3.87e-08 | 48 |
phagocyte | 3.87e-08 | 48 |
nongranular leukocyte | 5.99e-07 | 115 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 9.70e-36 | 114 |
neural tube | 8.39e-20 | 56 |
neural rod | 8.39e-20 | 56 |
future spinal cord | 8.39e-20 | 56 |
neural keel | 8.39e-20 | 56 |
regional part of nervous system | 2.00e-17 | 53 |
regional part of brain | 2.00e-17 | 53 |
regional part of forebrain | 3.83e-14 | 41 |
forebrain | 3.83e-14 | 41 |
anterior neural tube | 3.83e-14 | 41 |
Showing 1 to 10 of 40 entries