FFCP PHASE1:Hg19::chr6:32158004..32158015,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:32158004..32158015,-
|short_description=p2@PBX2
|description=CAGE_peak_2_at_PBX2_5end
|association_with_transcript=-41bp_to_ENST00000375050,NM_002586,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5089 | |EntrezGene=5089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8633 | |HGNC=8633 | ||
|TSSclassifier=strong | |||
|UniProt=P40425,Q7KZE5 | |UniProt=P40425,Q7KZE5 | ||
|association_with_transcript=-41bp_to_ENST00000375050,NM_002586,uc003oav.1,uc003oaw.2_5end | |||
|cluster_id=chr6:32158004..32158015,- | |||
|description=CAGE_peak_2_at_PBX2_5end | |||
|id=chr6:32158004..32158015,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.04e-21;5!CL:0002032;8.48e-08;1!CL:0000557;8.48e-08;1!CL:0002321;4.67e-07;15!CL:1000449;4.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.19e-20,5;CL:1000449,3.01e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.48e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.48e-08;1!DOID:0050619;8.48e-08;1!DOID:10165;8.48e-08;1!DOID:1357;8.48e-08;1!DOID:1798;8.48e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.10e-08,1;DOID:10165,6.10e-08,1;DOID:1798,6.10e-08,1;DOID:0050619,1.18e-07,1;DOID:1357,1.18e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.48e-08;1!UBERON:0001301;8.48e-08;1!UBERON:0001153;8.48e-08;1!UBERON:0001764;8.48e-08;1!UBERON:0009854;8.48e-08;1!UBERON:0001825;8.48e-08;1!UBERON:0006555;4.67e-07;15!UBERON:0004819;4.67e-07;15!UBERON:0001285;4.67e-07;15!UBERON:0007684;4.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,3.03e-10,16;UBERON:0004819,3.03e-10,16;UBERON:0001301,4.07e-08,1;UBERON:0005103,5.12e-08,8;UBERON:0000083,5.12e-08,8;UBERON:0009201,5.12e-08,8;UBERON:0006553,5.12e-08,8;UBERON:0003074,5.12e-08,8;UBERON:0003060,5.12e-08,8;UBERON:0001154,1.04e-07,1;UBERON:0001153,1.04e-07,1;UBERON:0001045,1.04e-07,1;UBERON:0001764,1.18e-07,1;UBERON:0001825,1.18e-07,1;UBERON:0004211,3.01e-07,15;UBERON:0009773,3.01e-07,15;UBERON:0001231,3.01e-07,15;UBERON:0001285,3.01e-07,15;UBERON:0007684,3.01e-07,15;UBERON:0004208,3.01e-07,15;UBERON:0000080,3.57e-07,9;UBERON:0002120,3.57e-07,9;UBERON:0004875,3.57e-07,9;UBERON:0005721,3.57e-07,9;UBERON:0005754,3.57e-07,9;UBERON:0007297,3.57e-07,9 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,0.263766978228454,0.123766352960047,0,0,0,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,0.382067028739756,0.656804715599566,0.314843125254717,0,0.383829398097213,0.154816123316076,0,0,0.739508020333575,0.46480320348181,0.426507697462265,0,0,0.200544447470142,0.434021741431704,0,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0.800791974072025,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0,0.486634870302636,0.661743720148475,0,0.175669571386252,0.130979075497713,0.728590576585084,1.11235332835329,0,0,0.132957960518865,0.238490624305342,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,1.20848795132744,0,0,0,0,0,0,0.450445921933289,0,0.949265659568129,0.366403487860815,1.31780417436063,0,0.436094052142534,0,0,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.468642863667593,0,0,0.298897361103602,0.117434498643765,0.809364721840658,0.280901613404497,0,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.500474079487857,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.412210116953756,0,0,0.337552664482532,0.194874010322397,0,0,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0.818238361772504,0.286804595389004,1.09776335516636,1.32529768321485,1.16193942869518,0.518305275076852,1.00928340350251,0,0,0,0,0,0,0.473227200159376,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.245976877086227,0.514703430895577,0.219500570817251,0,0.502644862058154,0.555530670951178,0,0,0,0.34779121492523,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0.503946384596579,0.141775097242386,0.268675568108545,0,0.383382679165211,0,0.176096868026452,0,0,0.12624243342638,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,1.08524321078289,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,0,0.36807447515742,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0,0.343143423810856,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0,0.328508624055237,0,0.232420756919918,0.483437798366489,0,0.184161977871793,0,0,0,0.902399225814824,0.15403067420883,1.56869953835371,1.46139224653261,0.527758144464379,1.13733384070897,0.850468526382578,0,0,0,1.50506932156456,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.656029291399411,0,0.618246069886334,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0,0.214840489736547,0.145016693914229,0,0.623224249527161,0,0.192190067365106,0.127612712494584,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0.855877976067841,0,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0.48763373908959,0,0,0.682499557039929,0.141405431953713,0,1.10273068709225,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0,0,0.422215270595328,0,0,0.349934720244983,0.192444225451024,0.670302275535787,1.08890984861323,0.188287601553558,0.86101074534246,0,0.886860307073351,0.689170200620878,1.01489521846434,0,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0.534120355637366,0,0.735120647943095,0.185803175125719,0.28853842595289,0.213425530045242,0.159426272728822,0,0.383010740264733,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0.321176150207399,0.403599414382095,0,0.687010689511529,0.614481528616916,0.223676107892416,0,0.586164286206121,0.278406173895242,0,0,0.99921590399346,0,0.18714054040822,0.146508179271894,2.91265252198832,0.66866030566487,0.284136146806413,0.71623345421307,0,0.614321404198464,0,0.281338832821026,0.222617410045812,0.329607748453519,0.422250816255987,0.19924798825107,1.10513566212459,1.0077309914171,0.511343412510774,1.10776324914963,0,0.359473404589307,0.179021174675609,0,0.394573622547734,0,0,0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| ||
|short_description=p2@PBX2 | |||
}} | }} |
Latest revision as of 02:12, 18 September 2015
Short description: | p2@PBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PBX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000375050, NM_002586, uc003oav.1, uc003oaw.2_5end |
EntrezGene: | PBX2 |
HGNC: | 8633 |
UniProt: | P40425Q7KZE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.19e-20 | 5 |
epithelial cell of nephron | 3.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 3.03e-10 | 16 |
kidney epithelium | 3.03e-10 | 16 |
epididymis | 4.07e-08 | 1 |
mesonephric epithelium | 5.12e-08 | 8 |
mesonephric tubule | 5.12e-08 | 8 |
nephric duct | 5.12e-08 | 8 |
renal duct | 5.12e-08 | 8 |
mesonephric duct | 5.12e-08 | 8 |
pronephric duct | 5.12e-08 | 8 |
vermiform appendix | 1.04e-07 | 1 |
caecum | 1.04e-07 | 1 |
midgut | 1.04e-07 | 1 |
maxillary sinus | 1.18e-07 | 1 |
paranasal sinus | 1.18e-07 | 1 |
nephron epithelium | 3.01e-07 | 15 |
renal tubule | 3.01e-07 | 15 |
nephron tubule | 3.01e-07 | 15 |
nephron | 3.01e-07 | 15 |
uriniferous tubule | 3.01e-07 | 15 |
nephrogenic mesenchyme | 3.01e-07 | 15 |
mesonephros | 3.57e-07 | 9 |
pronephros | 3.57e-07 | 9 |
nephrogenic cord | 3.57e-07 | 9 |
pronephric mesoderm | 3.57e-07 | 9 |
rostral part of nephrogenic cord | 3.57e-07 | 9 |
presumptive pronephric mesoderm | 3.57e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.10e-08 | 1 |
endocrine pancreas cancer | 6.10e-08 | 1 |
pancreatic endocrine carcinoma | 6.10e-08 | 1 |
paranasal sinus cancer | 1.18e-07 | 1 |
maxillary sinus cancer | 1.18e-07 | 1 |