FFCP PHASE1:Hg19::chr7:1022973..1022988,+: Difference between revisions
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|id=chr7:1022973..1022988,+
|short_description=p2@CYP2W1
|description=CAGE_peak_2_at_CYP2W1_5end
|association_with_transcript=-5bp_to_ENST00000340150_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54905 | |EntrezGene=54905 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20243 | |HGNC=20243 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJ10 | |UniProt=A6NJ10 | ||
|association_with_transcript=-5bp_to_ENST00000340150_5end | |||
|cluster_id=chr7:1022973..1022988,+ | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_2_at_CYP2W1_5end | |||
|id=chr7:1022973..1022988,+ | |||
|ontology_enrichment_celltype=CL:0000575!5.60e-13!2;CL:0000349!6.33e-09!3;CL:0002577!6.33e-09!3;CL:0002586!1.14e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.75e-14;12!CL:0002577;3.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-14,12;CL:0002577,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.25e-19;1!UBERON:0004161;1.60e-15;11!UBERON:0009497;3.07e-13;13!UBERON:0003104;1.36e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!4.64e-14!4;UBERON:0004340!4.64e-14!4;UBERON:0003124!8.42e-14!7;UBERON:0000478!2.08e-11!24;UBERON:0000966!7.02e-11!5;UBERON:0005388!7.02e-11!5;UBERON:0001802!7.02e-11!5;UBERON:0005631!2.18e-10!14;UBERON:0000158!2.18e-10!14;UBERON:0001781!1.14e-08!3;UBERON:0001782!1.14e-08!3;UBERON:0005424!1.14e-08!3;UBERON:0000020!1.29e-08!23;UBERON:0001032!3.11e-08!24;UBERON:0004456!3.11e-08!24;UBERON:0000019!1.74e-07!19;UBERON:0000047!1.74e-07!19;UBERON:0004088!1.74e-07!19;UBERON:0003072!1.74e-07!19;UBERON:0003071!1.74e-07!19;UBERON:0004128!1.74e-07!19;UBERON:0007029!1.97e-07!1;UBERON:0000160!2.35e-07!27;UBERON:0000970!4.24e-07!20;UBERON:0001052!4.35e-07!4;UBERON:0000964!6.59e-07!4;UBERON:0004348!6.59e-07!4;UBERON:0005427!6.59e-07!4;UBERON:0002104!9.49e-07!21;UBERON:0001456!9.49e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.11e-19;4!UBERON:0000160;2.58e-16;17!UBERON:0004907;2.90e-15;5!UBERON:0000059;3.18e-15;11!UBERON:0005409;7.48e-13;22!UBERON:0002107;2.98e-09;19!UBERON:0006925;2.98e-09;19!UBERON:0004921;2.33e-08;33!UBERON:0002331;3.20e-08;10!UBERON:0000478;2.23e-07;24!UBERON:0002423;3.64e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.88e-19,4;UBERON:0000160,2.53e-16,17;UBERON:0004907,3.12e-15,5;UBERON:0000059,3.18e-15,11;UBERON:0005409,2.04e-11,25;UBERON:0002107,2.98e-09,19;UBERON:0006925,2.98e-09,19;UBERON:0008836,2.98e-09,19;UBERON:0002331,3.25e-08,10;UBERON:0000358,3.25e-08,10;UBERON:0000307,3.25e-08,10;UBERON:0000091,3.25e-08,10;UBERON:0000087,3.25e-08,10;UBERON:0007010,3.25e-08,10;UBERON:0007806,3.25e-08,10;UBERON:0008780,3.25e-08,10;UBERON:0005728,3.25e-08,10;UBERON:0008835,4.55e-08,22;UBERON:0003894,4.55e-08,22;UBERON:0009854,9.66e-08,23;UBERON:0000478,2.25e-07,24;UBERON:0007499,3.64e-07,25;UBERON:0009497,3.64e-07,25;UBERON:0000015,3.64e-07,25;UBERON:0002423,3.64e-07,25;UBERON:0006235,3.64e-07,25;UBERON:0004161,3.64e-07,25;UBERON:0004921,4.25e-07,118;UBERON:0009856,6.56e-07,26 | |||
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|short_description=p2@CYP2W1 | |||
}} | }} |
Latest revision as of 19:08, 24 September 2015
Short description: | p2@CYP2W1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CYP2W1_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | -5bp_to_ENST00000340150_5end |
EntrezGene: | CYP2W1 |
HGNC: | 20243 |
UniProt: | A6NJ10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-14 | 12 |
placental epithelial cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.88e-19 | 4 |
intestine | 2.53e-16 | 17 |
lower digestive tract | 3.12e-15 | 5 |
large intestine | 3.18e-15 | 11 |
gastrointestinal system | 2.04e-11 | 25 |
liver | 2.98e-09 | 19 |
digestive gland | 2.98e-09 | 19 |
liver bud | 2.98e-09 | 19 |
umbilical cord | 3.25e-08 | 10 |
blastocyst | 3.25e-08 | 10 |
blastula | 3.25e-08 | 10 |
bilaminar disc | 3.25e-08 | 10 |
inner cell mass | 3.25e-08 | 10 |
cleaving embryo | 3.25e-08 | 10 |
connecting stalk | 3.25e-08 | 10 |
inner cell mass derived epiblast | 3.25e-08 | 10 |
extraembryonic mesoderm | 3.25e-08 | 10 |
hepatic diverticulum | 4.55e-08 | 22 |
liver primordium | 4.55e-08 | 22 |
digestive tract diverticulum | 9.66e-08 | 23 |
extraembryonic structure | 2.25e-07 | 24 |
epithelial sac | 3.64e-07 | 25 |
epithelium of foregut-midgut junction | 3.64e-07 | 25 |
anatomical boundary | 3.64e-07 | 25 |
hepatobiliary system | 3.64e-07 | 25 |
foregut-midgut junction | 3.64e-07 | 25 |
septum transversum | 3.64e-07 | 25 |
subdivision of digestive tract | 4.25e-07 | 118 |
sac | 6.56e-07 | 26 |