FFCP PHASE1:Hg19::chr7:143104768..143104774,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:143104768..143104774,-
|short_description=p3@EPHA1
|description=CAGE_peak_3_at_EPHA1_5end
|association_with_transcript=-25bp_to_ENST00000497891_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2041 | |EntrezGene=2041 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3385 | |HGNC=3385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000497891_5end | |||
|cluster_id=chr7:143104768..143104774,- | |||
|description=CAGE_peak_3_at_EPHA1_5end | |||
|id=chr7:143104768..143104774,- | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-19!172;CL:0000566!1.12e-19!172;CL:0000791!2.10e-18!18;CL:0000789!2.10e-18!18;CL:0002420!2.10e-18!18;CL:0002419!2.10e-18!18;CL:0000790!2.10e-18!18;CL:0000084!6.58e-18!25;CL:0000827!6.58e-18!25;CL:0000988!1.45e-17!182;CL:0002032!1.43e-16!165;CL:0000837!1.43e-16!165;CL:0000625!7.40e-15!11;CL:0000738!6.68e-10!140;CL:0002087!7.98e-10!119;CL:0000763!6.25e-09!112;CL:0000049!6.25e-09!112;CL:0000838!1.33e-08!52;CL:0000542!2.49e-08!53;CL:0000051!2.49e-08!53;CL:0002031!5.52e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000625;7.78e-36;11!CL:0000791;2.44e-30;18!CL:0000789;2.44e-30;18!CL:0002419;2.44e-30;18!CL:0000084;3.72e-29;25!CL:0000226;1.68e-12;3!CL:0000842;1.68e-12;3!CL:0000542;7.71e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.10e-36,11;CL:0000791,1.43e-30,18;CL:0000789,1.43e-30,18;CL:0002420,1.43e-30,18;CL:0002419,1.43e-30,18;CL:0000790,1.43e-30,18;CL:0000084,1.89e-29,25;CL:0000827,1.89e-29,25;CL:0000037,2.20e-17,168;CL:0000838,1.58e-16,52;CL:0000542,3.83e-16,53;CL:0000051,3.83e-16,53;CL:0000988,4.00e-16,177;CL:0002032,1.73e-14,161;CL:0000837,1.73e-14,161;CL:0000226,1.80e-12,3;CL:0000842,1.80e-12,3;CL:0002087,3.22e-08,115;CL:0000738,3.09e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;2.44e-30;18!CL:0000051;7.71e-10;53 | |||
|ontology_enrichment_disease=DOID:8692!3.91e-17!31;DOID:1240!4.25e-17!39;DOID:2531!1.63e-12!51;DOID:0060083!1.63e-12!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.38e-16;31!DOID:1240;4.81e-13;39!DOID:2531;1.48e-09;51!DOID:0060083;1.48e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.03e-17,39;DOID:8692,1.18e-16,31;DOID:2531,8.59e-13,51;DOID:0060083,8.59e-13,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.28e-07!15;UBERON:0000179!2.28e-07!15;UBERON:0000463!2.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.40e-12;15!UBERON:0000179;3.40e-12;15!UBERON:0000463;3.40e-12;15!UBERON:0002390;8.87e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.89e-12,15;UBERON:0000179,5.89e-12,15;UBERON:0000463,5.89e-12,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0.369754010166788,0,0,0.587200878669695,0,0.401088894940283,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,1.7703879310245,0.393010762749165,0.616804496998528,0,0.651844533267181,0.473447805734733,0,0,0,0,0,0,0,0.657751618414705,0.276350017785848,0.869409257205157,3.85545064221357,1.07016331235885,5.22677619024884,0,1.14966148080576,0.34362744548263,1.26509846009751,1.91139248594458,0,6.65316431113862,2.40920190524436,2.68771883424279,1.24930726552346,1.65744076430812,1.64225599384209,1.41124720257313,2.13952156626806,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.50939302401662,1.28343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.72571360654893,1.49418580924822,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,2.29391162142713,0,1.19115887728894,0.411362273086194,1.29694662238543,1.08006287447623,0,0,0,0,0,0,1.70740424036194,0.318852545457645,0.199579371432817,1.7235483311913,1.69338866179106,1.29848776109822,0.842391534340376,0.228234679033192,1.41011906195721,0,2.20079311142084,11.7229294825701,2.42159648629257,0.425846237690326,3.09154810280188,0.307240764308458,0.223676107892416,0.333698283423817,1.56310476321632,0,0,0,1.6653598399891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,1.02314474045374,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,15.3289947293605,3.29658538429552,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38699248602383,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.902410431630081,0,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0.378499274505237,0,6.96841755562903,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0.452122368852043,1.80016671457988,0,0,0,0.217716747896961,0,1.14498490124799,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,1.40891655513718,0 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| ||
|short_description=p3@EPHA1 | |||
}} | }} |
Latest revision as of 23:32, 16 September 2015
Short description: | p3@EPHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000497891_5end |
EntrezGene: | EPHA1 |
HGNC: | 3385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.10e-36 | 11 |
mature alpha-beta T cell | 1.43e-30 | 18 |
alpha-beta T cell | 1.43e-30 | 18 |
immature T cell | 1.43e-30 | 18 |
mature T cell | 1.43e-30 | 18 |
immature alpha-beta T cell | 1.43e-30 | 18 |
T cell | 1.89e-29 | 25 |
pro-T cell | 1.89e-29 | 25 |
hematopoietic stem cell | 2.20e-17 | 168 |
lymphoid lineage restricted progenitor cell | 1.58e-16 | 52 |
lymphocyte | 3.83e-16 | 53 |
common lymphoid progenitor | 3.83e-16 | 53 |
hematopoietic cell | 4.00e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-14 | 161 |
single nucleate cell | 1.80e-12 | 3 |
mononuclear cell | 1.80e-12 | 3 |
nongranular leukocyte | 3.22e-08 | 115 |
leukocyte | 3.09e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 5.89e-12 | 15 |
haemolymphatic fluid | 5.89e-12 | 15 |
organism substance | 5.89e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.03e-17 | 39 |
myeloid leukemia | 1.18e-16 | 31 |
hematologic cancer | 8.59e-13 | 51 |
immune system cancer | 8.59e-13 | 51 |