FFCP PHASE1:Hg19::chr7:87835740..87835754,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:87835740..87835754,-
|short_description=p5@SRI
|description=CAGE_peak_5_at_SRI_5end
|association_with_transcript=-148bp_to_AL117616_5end
|EntrezGene=6717
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6717 | |EntrezGene=6717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11292 | |HGNC=11292 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-148bp_to_AL117616_5end | |||
|cluster_id=chr7:87835740..87835754,- | |||
|description=CAGE_peak_5_at_SRI_5end | |||
|id=chr7:87835740..87835754,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002616;2.37e-29;1!CL:0000746;7.42e-11;3!CL:0002541;9.90e-11;3!CL:0000737;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.33e-29,1;CL:0000746,7.42e-11,3;CL:0000513,7.42e-11,3;CL:0002541,1.20e-10,3;CL:0000737,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!CL:0000513;7.42e-11;3!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.28e-10!82;UBERON:0005743!1.08e-09!86;UBERON:0001049!1.79e-09!57;UBERON:0005068!1.79e-09!57;UBERON:0006241!1.79e-09!57;UBERON:0007135!1.79e-09!57;UBERON:0000073!6.56e-09!94;UBERON:0001016!6.56e-09!94;UBERON:0000955!1.18e-08!69;UBERON:0006238!1.18e-08!69;UBERON:0002616!1.35e-08!59;UBERON:0003075!5.98e-08!86;UBERON:0007284!5.98e-08!86;UBERON:0002346!1.13e-07!90;UBERON:0003080!1.27e-07!42;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41;UBERON:0007023!9.47e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0002771;1.15e-15;2!UBERON:0003714;2.05e-15;2!UBERON:0005162;2.05e-15;2!UBERON:0000122;2.05e-15;2!UBERON:0005406;2.05e-15;2!UBERON:0003124;9.90e-11;3!UBERON:0000920;9.90e-11;3!UBERON:0001872;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0002771,1.15e-15,2;UBERON:0005406,1.54e-15,2;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0000920,1.20e-10,3;UBERON:0001781,2.11e-08,4;UBERON:0001872,6.39e-07,5 | |||
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| ||
|short_description=p5@SRI | |||
}} | }} |
Latest revision as of 21:47, 19 September 2015
Short description: | p5@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SRI_5end |
Coexpression cluster: | NA |
Association with transcript: | -148bp_to_AL117616_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.33e-29 | 1 |
cardiac muscle cell | 7.42e-11 | 3 |
cardiac muscle myoblast | 7.42e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
striated muscle cell | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
middle temporal gyrus | 1.15e-15 | 2 |
perirenal fat | 1.54e-15 | 2 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
egg chorion | 1.20e-10 | 3 |
layer of retina | 2.11e-08 | 4 |
parietal lobe | 6.39e-07 | 5 |