FFCP PHASE1:Hg19::chr10:124254447..124254458,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:124254447..124254458,- | |||
|description=CAGE_peak_at_chr10:124254447..124254458,- | |||
|id=chr10:124254447..124254458,- | |||
|ontology_enrichment_celltype=CL:0000055!1.24e-20!180;CL:0000057!1.53e-18!75;CL:0002620!8.18e-16!23;CL:0002371!1.32e-11!591;CL:0000548!5.49e-11!679;CL:0000004!5.49e-11!679;CL:0000255!5.49e-11!679;CL:0000012!8.69e-11!682;CL:0002551!9.00e-11!6;CL:0000144!2.63e-10!625;CL:0000003!8.09e-09!722;CL:0000220!2.25e-08!246;CL:0002321!3.47e-08!248;CL:0002543!3.16e-07!6;CL:0002556!5.43e-07!6;CL:0000188!5.87e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002551;8.95e-31;6!CL:0002620;4.08e-15;23!CL:0002556;5.06e-12;6!CL:0000346;6.28e-11;3!CL:1000428;6.28e-11;3!CL:0000057;8.82e-11;73!CL:0002504;1.08e-10;3!CL:1000279;1.08e-10;3!CL:1000280;1.08e-10;3!CL:0002552;4.31e-07;5!CL:0002559;6.84e-07;5!CL:0002188;9.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,8.45e-31,6;CL:0000057,1.05e-16,76;CL:0002620,4.47e-15,23;CL:0002556,5.67e-12,6;CL:0000346,4.90e-11,3;CL:1000428,4.90e-11,3;CL:0002504,1.08e-10,3;CL:1000279,1.08e-10,3;CL:1000280,1.08e-10,3;CL:0002552,3.89e-07,5;CL:0002559,5.91e-07,5;CL:0002188,9.18e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.76e-14!83;UBERON:0002329!1.76e-14!83;UBERON:0003077!1.76e-14!83;UBERON:0003059!1.76e-14!83;UBERON:0007282!1.76e-14!83;UBERON:0009618!1.76e-14!83;UBERON:0007285!1.76e-14!83;UBERON:0003102!1.44e-12!95;UBERON:0002199!2.07e-12!45;UBERON:0002416!2.07e-12!45;UBERON:0002067!3.48e-12!9;UBERON:0004016!3.48e-12!9;UBERON:0010083!3.48e-12!9;UBERON:0002097!5.94e-12!40;UBERON:0004290!6.18e-10!70;UBERON:0000486!1.13e-09!82;UBERON:0005284!1.65e-08!5;UBERON:0005256!4.19e-08!143;UBERON:0001758!5.43e-07!6;UBERON:0003672!5.43e-07!6;UBERON:0000475!7.18e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.39e-39;9!UBERON:0001758;5.06e-12;6!UBERON:0003672;5.06e-12;6!UBERON:0000412;6.28e-11;3!UBERON:0001992;6.28e-11;3!UBERON:0003129;2.24e-10;7!UBERON:0003102;5.02e-10;50!UBERON:0002097;5.90e-10;41!UBERON:0004923;1.06e-08;55!UBERON:0002199;1.44e-07;46!UBERON:0002416;1.44e-07;46!UBERON:0002073;6.84e-07;5!UBERON:0005284;6.84e-07;5!UBERON:0011137;9.14e-07;11!UBERON:0010323;9.14e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,9.89e-40,9;UBERON:0004016,9.89e-40,9;UBERON:0010083,9.89e-40,9;UBERON:0003102,2.85e-14,99;UBERON:0002097,2.34e-13,41;UBERON:0001758,5.67e-12,6;UBERON:0003672,5.67e-12,6;UBERON:0002199,9.32e-12,46;UBERON:0002416,9.32e-12,46;UBERON:0007503,1.65e-11,78;UBERON:0000412,4.90e-11,3;UBERON:0001992,4.90e-11,3;UBERON:0003129,2.47e-10,7;UBERON:0002329,8.10e-09,71;UBERON:0003059,8.10e-09,71;UBERON:0007282,8.10e-09,71;UBERON:0004290,8.10e-09,71;UBERON:0009618,8.10e-09,71;UBERON:0003077,1.13e-08,72;UBERON:0007285,1.13e-08,72;UBERON:0007524,1.56e-08,73;UBERON:0004923,7.57e-08,66;UBERON:0000486,2.61e-07,83;UBERON:0002073,5.91e-07,5;UBERON:0005086,5.91e-07,5;UBERON:0001444,8.37e-07,49;UBERON:0005284,8.66e-07,5;UBERON:0010323,9.70e-07,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03366703667732,0.71153252537342,0,0.402829317109147,0,0,0,0,0.535798369704479,0.898117490504679,0.563057402416611,0,1.89853131913626,0.732806975721629,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,1.05950199351452,0.576175924479999,0,2.49728061464256,2.85235910772225,0.448346041655403,1.17434498643765,1.45685649931318,1.12360645361799,3.26646674007829,2.94802361548243,0.929932030581889,0,0,0.910161361938026,0,3.19838616512726,1.12606667884768,3.04770527032601,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.600182192168805,0,0.515281080091258,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.06502877754984,0.302256294682921,0,0.386521706326594,0.545492241181669,0,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0.464367928031979,0,0.118306800039844,0.505754070234305,0.241011029883482,0.330881918197182,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,3.11980435583874,0,0,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.79409734952577,0.43596006883328,0.8800594298514,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,1.37060810223918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,1.13733384070897,1.19065593693561,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0.859361958946189,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,2.60510858551767,0.949138274156178,0.190630193923825,0.767693373934002,0,0,0,0.359744915166629,1.64722217841633,1.06031162111118,0,0,0.421258456238981,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,1.13841952129715,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.757612021100357,0.50313580350515,0,0.228840068396924,0,0.15543720058278,0,0.318593534327405,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,4.54012762853469,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:124254447..124254458,- | |||
}} |
Latest revision as of 11:13, 23 July 2015
Short description: | p@chr10:124254447..124254458, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:124254447..124254458, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 8.45e-31 | 6 |
fibroblast | 1.05e-16 | 76 |
skin fibroblast | 4.47e-15 | 23 |
fibroblast of periodontium | 5.67e-12 | 6 |
hair follicle dermal papilla cell | 4.90e-11 | 3 |
stem cell of epidermis | 4.90e-11 | 3 |
enteric smooth muscle cell | 1.08e-10 | 3 |
smooth muscle cell of large intestine | 1.08e-10 | 3 |
smooth muscle cell of colon | 1.08e-10 | 3 |
fibroblast of gingiva | 3.89e-07 | 5 |
hair follicle cell | 5.91e-07 | 5 |
glomerular endothelial cell | 9.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermis | 9.89e-40 | 9 |
dermatome | 9.89e-40 | 9 |
future dermis | 9.89e-40 | 9 |
surface structure | 2.85e-14 | 99 |
skin of body | 2.34e-13 | 41 |
periodontium | 5.67e-12 | 6 |
dentition | 5.67e-12 | 6 |
integument | 9.32e-12 | 46 |
integumental system | 9.32e-12 | 46 |
epithelial vesicle | 1.65e-11 | 78 |
dermal papilla | 4.90e-11 | 3 |
papillary layer of dermis | 4.90e-11 | 3 |
skull | 2.47e-10 | 7 |
somite | 8.10e-09 | 71 |
presomitic mesoderm | 8.10e-09 | 71 |
presumptive segmental plate | 8.10e-09 | 71 |
dermomyotome | 8.10e-09 | 71 |
trunk paraxial mesoderm | 8.10e-09 | 71 |
paraxial mesoderm | 1.13e-08 | 72 |
presumptive paraxial mesoderm | 1.13e-08 | 72 |
dense mesenchyme tissue | 1.56e-08 | 73 |
organ component layer | 7.57e-08 | 66 |
multilaminar epithelium | 2.61e-07 | 83 |
hair follicle | 5.91e-07 | 5 |
hair follicle placode | 5.91e-07 | 5 |
subdivision of head | 8.37e-07 | 49 |
brain vasculature | 8.66e-07 | 5 |
cranial skeletal system | 9.70e-07 | 11 |