FFCP PHASE1:Hg19::chr11:32851325..32851341,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30799 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZD6 | |||
|association_with_transcript=-139bp_to_NM_024081_5end | |||
|cluster_id=chr11:32851325..32851341,+ | |||
|description=CAGE_peak_2_at_PRRG4_5end | |||
|id=chr11:32851325..32851341,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.02e-31!112;CL:0000049!5.02e-31!112;CL:0000766!3.80e-30!76;CL:0002009!1.23e-29!65;CL:0002194!6.19e-29!63;CL:0000576!6.19e-29!63;CL:0000040!6.19e-29!63;CL:0000559!6.19e-29!63;CL:0000557!2.42e-26!71;CL:0000839!2.25e-25!70;CL:0000860!1.13e-24!45;CL:0002057!6.59e-23!42;CL:0000037!1.89e-18!172;CL:0000566!1.89e-18!172;CL:0000988!1.37e-17!182;CL:0002032!3.73e-17!165;CL:0000837!3.73e-17!165;CL:0000738!2.67e-16!140;CL:0002087!8.67e-13!119;CL:0002031!2.71e-11!124;CL:0000094!8.70e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.66e-26;33!CL:0002057;1.66e-26;33!CL:0000576;6.23e-26;48!CL:0000473;2.04e-24;39!CL:0000234;2.04e-24;39!CL:0000766;1.52e-19;69!CL:0000763;1.62e-14;100!CL:0000094;6.76e-10;8!CL:0000081;1.46e-08;11!CL:0000738;3.11e-07;136!CL:0002087;8.55e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.81e-47,108;CL:0000049,2.81e-47,108;CL:0000766,1.62e-46,72;CL:0002194,7.07e-43,59;CL:0000576,7.07e-43,59;CL:0000040,7.07e-43,59;CL:0000559,7.07e-43,59;CL:0002009,8.73e-43,61;CL:0000557,3.46e-39,67;CL:0000839,1.50e-37,66;CL:0000473,1.58e-37,48;CL:0000234,1.58e-37,48;CL:0000860,4.14e-35,42;CL:0002057,4.14e-35,42;CL:0000988,3.03e-31,177;CL:0000037,4.04e-31,168;CL:0002032,1.05e-29,161;CL:0000837,1.05e-29,161;CL:0000738,2.29e-27,136;CL:0002087,5.61e-22,115;CL:0002031,2.37e-19,120;CL:0000094,4.71e-10,8;CL:0000081,1.12e-08,11;CL:0002393,7.21e-07,9;CL:0002397,7.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;9.71e-25;42!CL:0000049;1.72e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.37e-30!102;UBERON:0003061!1.37e-30!102;UBERON:0002193!1.38e-26!112;UBERON:0002371!9.94e-24!80;UBERON:0001474!9.89e-20!86;UBERON:0002405!6.19e-17!115;UBERON:0004765!1.26e-15!101;UBERON:0001434!1.26e-15!101;UBERON:0007023!1.44e-13!115;UBERON:0000178!5.79e-10!15;UBERON:0000179!5.79e-10!15;UBERON:0000463!5.79e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.89e-15;15!UBERON:0000179;4.89e-15;15!UBERON:0000463;4.89e-15;15!UBERON:0002390;4.26e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.50e-45,98;UBERON:0003061,5.50e-45,98;UBERON:0002193,2.25e-38,108;UBERON:0002371,3.39e-35,76;UBERON:0001474,4.11e-31,82;UBERON:0004765,1.50e-26,90;UBERON:0002405,4.45e-26,93;UBERON:0001434,5.01e-23,100;UBERON:0000178,3.40e-15,15;UBERON:0000179,3.40e-15,15;UBERON:0000463,3.40e-15,15;UBERON:0003081,4.84e-15,203;UBERON:0002204,9.29e-08,167;UBERON:0007023,8.74e-07,114 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.9704141467987,2.2826126580967,2.75354993794233,2.68680578668049,4.18003532953405,0,0,0,0,0,4.11040615068786,3.87796785972314,3.00816671205213,5.4252717678963,3.80656306207871,2.91504299417082,2.57575567634187,2.61716829803216,4.1566353805769,5.82201746850759,1.39457422143411,2.05583944010913,1.85823822537062,1.7261543539329,1.5369642391746,1.18241114944293,5.86067657252252,3.22742341791913,5.41705946377367,1.50593871634084,1.91034305040492,1.79778787556068,3.97909060082173,2.56743221660875,7.03270838378945,2.96866170168044,2.79249120670285,3.83602275479425,4.93355705668593,3.40431134814684,6.85104473895132,1.25624332628372,1.5644487552606,2.82345498116652,2.42159801053347,3.31449872388808,7.91155968602211,1.69004229049553,2.12604299965044,2.09658645508376,3.93150209012733,4.35512989240368,8.19700492155109,0.570025487482497,1.79025009479181,2.00930569141097,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,5.28685314316103,1.68152568894461,2.10707267820062,0,0,0,0.501559486172034,0,0,0,0.445641827540694,0,0,0.270803863765016,0.640456598628376,0.650296737799391,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.11332214173056,0.728590576585084,0.741568885568859,2.27183175558278,2.43781632218974,1.19662164466979,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,7.75560528296651,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.545492241181669,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0,0.504641701751257,0,0,0.643240938192885,0,0,0,1.53798840051797,0.842923450390509,2.16909926895134,1.21323370005633,2.17879444092406,0.949082476444386,1.75280700608214,0.784885860501384,0.769494313892781,0,0,0,0,3.80265104465493,12.7767538168091,6.49868897349544,0,0.368965315629341,0,1.09750285408626,1.1240175325762,0.301586917234893,0.648119116109707,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,3.44703808522356,0.702012795417713,2.37809859661965,0,0.671928512795438,0.708875486211932,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,0,0,0,0.380987365753014,0,0,0,0.308482478109971,0,1.14330573052231,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,1.25342674267927,0,0.788123040807709,0,0,0.254094624222463,0,0,0,0,27.7132598860457,14.9580729602012,24.8649308061621,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,1.6541442089831,2.37285620900479,1.38745825144478,0.909382714338778,0,0.907170879989041,0,0.767309866440312,0.280660094433074,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,0.483437798366489,0.40101294060657,0.644566922551274,0,0,0.131124414959424,0,0.770153371044148,0.784349769176855,0,0.73886140225013,0,0,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0.671624264166535,1.09629938322967,0.784306353074702,0,0,0,3.50339439602256,0,0,0,1.95018073810956,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,4.70719003883896,0.43050537267123,0,0,0.459446800413919,7.10426652925037,1.52927441428475,3.98753031021914,4.52640373369799,6.58179636937911,5.83625980073446,7.56044012133361,3.96562588147135,0.106824071127473,0,0.490080431962063,0.371606350251437,0,0,0,0,1.7235483311913,0.846694330895531,1.29848776109822,3.65036331547496,2.28234679033192,0.626719583092093,5.01268954180134,0,4.17528995269619,3.63239472943886,6.38769356535489,0,11.6751490437214,13.8679186893298,13.0142330535289,1.56310476321632,0,0,0,0,0,0.18714054040822,0.586032717087576,0,1.89453753271713,0,1.19372242368845,0.593929361665277,1.22864280839693,0,0.844016498463076,0.111308705022906,1.48323486804084,0,1.59398390600856,0.828851746593443,0,1.43176155503017,0,0,0.449341755736634,0,4.09257896181497,0.789147245095469,2.3948309234694,0,0,0.185536196323703,0,0,1.04951999995435,1.44999915086959,0.341380344856499,0.254253650292766,0,0,0,1.73624994933292,0,1.4471572635049,0,0,0.295547618953547,0.658156191461918,0.21787692703798,7.66830593532318,0.769502585037971,0,0,0.448788222048861,0.108647371922008,1.5950057986596,0.274792780205587,0,0,1.2558420511602,1.99454018280188,0,0,0,0,0.317873157960757,0.421996129056054,0,0.141353071433941,0,0,1.23840590304675,0,8.00607047437679,2.22415090103705,3.9680340812073,0.67401132980677,0,0.234264445725339,0,0.391329237864179,8.01175252462506,1.97292201424695,1.20990716048664,0.30607276163049,1.51647791108371,1.80388103297391,1.14057010536972,0,0,0,0,0,0,0,0.881931576729399,0.870592065804026,2.27144668714639,0,2.70917727609438,3.87373380556783,3.20250282507516,1.74580229679155,0,0.225980740780532,0,0,0.316553979779393,0.195551382734803,0,0.640358984218058,0.39961921916426,0.432271251462318,0,0,0,0,2.12124631155116,0.407712618220842,0.209205692624666,0.101998217636322,0.288950589901519,0,1.50595916781192,12.7746588066972,0.429765441419957,2.10309883423452,2.79282401272254,1.83328339209347,0.717873024576814,0.798716001995964,0,1.56220020209311,0.268733889946905,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0.295282444544246,0.254019996197353,0,1.49823746722733,0.643012593860077,0.550157746388935,0.415440338029185,0.674921674654501,3.0952078182318,0.607495566580247,2.68347750079413,4.1767024868575,1.36381929150995,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0,3.59190574687462,0.656740165994712,0.170388021785422,1.24643300672138,4.54311924402056,3.97520666736664,0.387848869084652,1.3223260174269,0,0,1.38823636338003,0,1.24271716604159,0,0.197611631897944,0.121792598380896,0.638341257770182,0,0,1.22538230705385,0,0.628216385000937,0,0.122026264901963,0.876336514945499,0,1.88579387612649,1.55241007353459,0.415045904808692,0,0.606596470166591,0.285465333544967,0,0,0,0,0,0,1.7046270474758,0.50313580350515,0.889811221596536,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,5.10437135866343,0.796191777397232,0.800055529326307,0,0,0,0,0.214441591374926,0.260994291965212,0.680117776536817,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0.706756583783524,0.192914038270915,2.70307905044916,1.02496607435179,0,0.303859956177382,0.276516872303462,1.94860308839388,2.39156712564054,2.78061170234935,0.655219697692825,0,0,0.39997479170986,2.13383459388282,0,0,0.368211900503681,0.279759015438889,0,0,0.107824811396682,0.471797825567689,0,0,0,0,0,0,0.394308725006267,0,0,0,0.449604575675217,0,0.159633859057151,0.615349092722265,0.252071696221718,0.0691572524642179,0.484426936895553,0,0.687034029507179,0.589848616738702,4.21885776599862,0.808679663052368,0,0,0,0.225630985047772,0.20170506870352,1.56302802246618,0,0.982631505060581,0.443568258651136,0.270150338473579,0,0.413373593002368,0.317079050969534,0,1.64477330057155,1.98484471355718,0,1.53314913167514,0,0.672567444437648,0.606965604236632,2.04895972216168,0.975726071789027,1.03710588800201,0,0.611727596791485,0.197318320688547,0,0.778619813244484,1.02041020705668,0.942693539496011,0,0,9.0689588311821,10.9882888214022,2.64463213453628,0.158013611732727,0.464965701472501,0.173858272302579,0,0.62164849248911,1.0243108625637,3.45629830907046,0.430227358820278,1.41998400876678,1.02256085710989,1.69354820076372,0,0.62041277132864,0,0.447421727191169,0.294450700845729,0.731507549893617,0.647428837187895,0.410651227424988,0,0.971421986118279,0.233939463462106,0.198950775161368,0,0.5647304101948,0,0.603851374266694,0.617393264863557,0.218559560503957,0,1.71603825227734,0,0.981542335574726,3.56455680392503,1.2679671827502,0,1.50374268767766,0.644578879735772,0,0.357107877211315,1.41157948686277,0.240724100067505,2.19100916473955,0.917458566809082,3.58348957878628,2.52434499509095,0.203974470572744,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.101988829741982,0,0.0918948995348449,0.50141507858475,0.530450887527676,0,0,1.75836092965222,1.91910583710883,0,0.452122368852043,0.496597714366863,0.33639558774184,1.59117895695412,0,1.30630048738177,0,0.606168477131288,1.29099969706817,0.332660356546013,0.407016343054873,0.747091421144008,0,0.179650404213174,7.03922827210363,0.122241444182866,1.22068853494722,5.99181096766961,1.00636896795513,0 | |||
|short_description=p2@PRRG4 | |||
}} |
Latest revision as of 15:57, 17 September 2015
Short description: | p2@PRRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRRG4_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_NM_024081_5end |
EntrezGene: | PRRG4 |
HGNC: | 30799 |
UniProt: | Q9BZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.81e-47 | 108 |
common myeloid progenitor | 2.81e-47 | 108 |
myeloid leukocyte | 1.62e-46 | 72 |
monopoietic cell | 7.07e-43 | 59 |
monocyte | 7.07e-43 | 59 |
monoblast | 7.07e-43 | 59 |
promonocyte | 7.07e-43 | 59 |
macrophage dendritic cell progenitor | 8.73e-43 | 61 |
granulocyte monocyte progenitor cell | 3.46e-39 | 67 |
myeloid lineage restricted progenitor cell | 1.50e-37 | 66 |
defensive cell | 1.58e-37 | 48 |
phagocyte | 1.58e-37 | 48 |
classical monocyte | 4.14e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.14e-35 | 42 |
hematopoietic cell | 3.03e-31 | 177 |
hematopoietic stem cell | 4.04e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.05e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-29 | 161 |
leukocyte | 2.29e-27 | 136 |
nongranular leukocyte | 5.61e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 2.37e-19 | 120 |
granulocyte | 4.71e-10 | 8 |
blood cell | 1.12e-08 | 11 |
intermediate monocyte | 7.21e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.50e-45 | 98 |
blood island | 5.50e-45 | 98 |
hemolymphoid system | 2.25e-38 | 108 |
bone marrow | 3.39e-35 | 76 |
bone element | 4.11e-31 | 82 |
skeletal element | 1.50e-26 | 90 |
immune system | 4.45e-26 | 93 |
skeletal system | 5.01e-23 | 100 |
blood | 3.40e-15 | 15 |
haemolymphatic fluid | 3.40e-15 | 15 |
organism substance | 3.40e-15 | 15 |
lateral plate mesoderm | 4.84e-15 | 203 |
musculoskeletal system | 9.29e-08 | 167 |
adult organism | 8.74e-07 | 114 |