FFCP PHASE1:Hg19::chr11:69518781..69518797,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9965 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3675 | |||
|TSSclassifier=strong | |||
|UniProt=O95750 | |||
|association_with_transcript=308bp_to_NM_005117,uc001opf.2_5end | |||
|cluster_id=chr11:69518781..69518797,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_1_at_FGF19_5end | |||
|id=chr11:69518781..69518797,- | |||
|ontology_enrichment_celltype=CL:0002322!1.63e-12!5;CL:0000047!1.17e-09!8;CL:0000540!3.21e-09!6;CL:0000031!3.21e-09!6;CL:0000404!3.21e-09!6;CL:0000066!7.17e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.30e-28;5!CL:0000039;4.64e-13;7!CL:0000586;4.64e-13;7!CL:0002321;6.11e-13;15!CL:0000540;1.23e-08;6!CL:0000404;1.23e-08;6!CL:0002553;2.95e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.49e-28,5;CL:0000039,4.23e-13,7;CL:0000586,4.23e-13,7;CL:0000047,6.57e-11,8;CL:0000540,1.28e-08,6;CL:0000031,1.28e-08,6;CL:0000404,1.28e-08,6;CL:0002553,2.95e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.61e-09;10!UBERON:0005564;3.61e-09;10!CL:0000031;1.23e-08;6!UBERON:0006242;3.52e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.34e-10!143;DOID:305!4.74e-09!106;DOID:3095!4.11e-08!22;DOID:2994!4.11e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.32e-07;1!DOID:1357;3.32e-07;1!DOID:3371;7.82e-07;1!DOID:4549;7.82e-07;1!DOID:5861;7.82e-07;1!DOID:6496;7.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.32e-07,1;DOID:1357,3.32e-07,1;DOID:3371,7.82e-07,1;DOID:4549,7.82e-07,1;DOID:5861,7.82e-07,1;DOID:6496,7.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!6.86e-08!7;UBERON:0001173!6.86e-08!7;UBERON:0004912!6.86e-08!7;UBERON:0003135!2.84e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.36e-12;11!UBERON:0000473;1.93e-11;8!UBERON:0002108;3.19e-10;4!UBERON:0000058;7.54e-09;10!UBERON:0002114;3.23e-08;2!UBERON:0002294;1.03e-07;7!UBERON:0001173;1.03e-07;7!UBERON:0000922;2.29e-07;49!UBERON:0001764;3.32e-07;1!UBERON:0001825;3.32e-07;1!UBERON:0004913;4.43e-07;1!UBERON:0003703;4.43e-07;1!UBERON:0001174;4.43e-07;1!UBERON:0004914;4.43e-07;1!UBERON:0001000;6.24e-07;1!UBERON:0005352;6.24e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.26e-12,11;UBERON:0000473,1.78e-11,8;UBERON:0002108,2.90e-10,4;UBERON:0002114,2.95e-08,2;UBERON:0001764,3.32e-07,1;UBERON:0001825,3.32e-07,1;UBERON:0004913,4.43e-07,1;UBERON:0003703,4.43e-07,1;UBERON:0001174,4.43e-07,1;UBERON:0004914,4.43e-07,1;UBERON:0001000,6.24e-07,1;UBERON:0005352,6.24e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35433163884467,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6619770378281,8.21684563593209,24.9816977169465,12.1283434367983,10.849796587652,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,2.58275720940538,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28685161800217,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,8.6004996587785,0,0,0,0,0,0,0,0,0,0,0,1.3480252672099,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,1.77977555204936,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.697118721393016,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,9.86461007123476,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,1.7638631534588,0,0.52418000472609,0,0.0967563312890851,0,0,0,4.05978182780901,0,0,0,0,0,0.160317640503067,159.876293059775,0.39961921916426,3.31407959454444,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87690427478594,3.85110422472255,1.24632101408756,0,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,169.147261661502,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65392008751296,0,0,0.734210113519403,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.127894371303652,0,2.35898912783845,0,0.33946505990805,0.637724760305049,0,0.558644917973244,0,0,882.228964610588,0,0,0,0,0,0,0,0,0,1.42769420259154,0,2.35939446695481,0,0,0,0,0,0,0,0,0,0,20.9955642428204,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,1.04314963381548,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.731507549893617,0,0,1.1598144313382,0.485710993059139,0,0,0,319.072681760062,0,0,1.389134845943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.3965408764437,0,0,1.5870805215462,0,0,0,0,0.655593431782173,0,12.6466148880057,35.8071323055851,2.84874188558019,11.7832543467416,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p1@FGF19 | |||
}} |
Latest revision as of 21:50, 19 September 2015
Short description: | p1@FGF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGF19_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 308bp_to_NM_005117, uc001opf.2_5end |
EntrezGene: | FGF19 |
HGNC: | 3675 |
UniProt: | O95750 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.49e-28 | 5 |
germ line cell | 4.23e-13 | 7 |
germ cell | 4.23e-13 | 7 |
neuronal stem cell | 6.57e-11 | 8 |
neuron | 1.28e-08 | 6 |
neuroblast | 1.28e-08 | 6 |
electrically signaling cell | 1.28e-08 | 6 |
lung fibroblast | 2.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.26e-12 | 11 |
testis | 1.78e-11 | 8 |
small intestine | 2.90e-10 | 4 |
duodenum | 2.95e-08 | 2 |
maxillary sinus | 3.32e-07 | 1 |
paranasal sinus | 3.32e-07 | 1 |
hepatopancreatic ampulla | 4.43e-07 | 1 |
extrahepatic bile duct | 4.43e-07 | 1 |
common bile duct | 4.43e-07 | 1 |
duodenal papilla | 4.43e-07 | 1 |
vas deferens | 6.24e-07 | 1 |
spermatic cord | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.32e-07 | 1 |
maxillary sinus cancer | 3.32e-07 | 1 |
chondrosarcoma | 7.82e-07 | 1 |
extraosseous chondrosarcoma | 7.82e-07 | 1 |
myxoid chondrosarcoma | 7.82e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 7.82e-07 | 1 |