FFCP PHASE1:Hg19::chr8:13134123..13134134,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:13134123..13134134,-
|short_description=p16@DLC1
|description=CAGE_peak_16_at_DLC1_5end
|association_with_transcript=-66bp_to_uc003wwl.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10395 | |EntrezGene=10395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2897 | |HGNC=2897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_uc003wwl.1_5end | |||
|cluster_id=chr8:13134123..13134134,- | |||
|description=CAGE_peak_16_at_DLC1_5end | |||
|id=chr8:13134123..13134134,- | |||
|ontology_enrichment_celltype=CL:0000222!1.54e-16!119;CL:0000213!9.85e-12!57;CL:0000215!9.85e-12!57;CL:0002139!1.70e-10!24;CL:0002078!1.65e-09!44;CL:0000115!1.07e-08!35;CL:0000220!1.83e-08!246;CL:0002321!3.72e-08!248;CL:1000449!1.66e-07!16;CL:0000071!2.17e-07!18;CL:0002546!2.17e-07!18;CL:0002681!7.89e-07!13;CL:0002584!7.89e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.74e-10;15!CL:1000497;1.13e-08;17!CL:0002518;1.13e-08;17!CL:0002536;2.11e-08;2!CL:1000306;6.22e-08;4!CL:0002547;6.22e-08;4!CL:0000115;7.33e-08;36!CL:1000746;1.20e-07;7!CL:1000612;1.20e-07;7!CL:0000213;7.20e-07;58!CL:0000215;7.20e-07;58!CL:0002681;8.95e-07;12!CL:0002584;8.95e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.32e-11,58;CL:0000215,7.32e-11,58;CL:1000449,3.56e-10,15;CL:1000497,7.48e-09,17;CL:0002518,7.48e-09,17;CL:0000115,1.06e-08,36;CL:0002536,1.86e-08,2;CL:1000746,1.20e-07,7;CL:1000612,1.20e-07,7;CL:0000222,1.21e-07,121;CL:1000306,2.32e-07,4;CL:0002547,2.32e-07,4;CL:0002681,9.01e-07,12;CL:0002584,9.01e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.97e-08;2!UBERON:0004161;3.25e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;2.78e-14;4!UBERON:0002435;2.78e-14;4!UBERON:0000204;2.78e-14;4!UBERON:0009663;1.76e-12;7!UBERON:0005383;2.22e-11;3!UBERON:0005382;2.22e-11;3!UBERON:0006555;5.74e-10;15!UBERON:0004819;5.74e-10;15!UBERON:0001285;5.74e-10;15!UBERON:0007684;5.74e-10;15!UBERON:0002420;1.28e-09;9!UBERON:0000125;1.28e-09;9!UBERON:0007245;1.28e-09;9!UBERON:0002308;1.28e-09;9!UBERON:0010009;1.28e-09;9!UBERON:0010011;1.28e-09;9!UBERON:0000454;1.28e-09;9!UBERON:0001873;5.97e-08;2!UBERON:0004797;6.22e-08;4!UBERON:0000415;6.22e-08;4!UBERON:0007240;6.22e-08;4!UBERON:0005742;6.22e-08;4!UBERON:0005734;6.22e-08;4!UBERON:0004664;6.22e-08;4!UBERON:0004663;6.22e-08;4!UBERON:0000074;1.20e-07;7!UBERON:0001229;1.20e-07;7!UBERON:0002107;1.73e-07;19!UBERON:0006925;1.73e-07;19!UBERON:0000353;1.93e-07;15!UBERON:0002417;6.15e-07;58!UBERON:0000916;6.15e-07;58!UBERON:0001225;8.95e-07;12!UBERON:0008987;8.95e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.65e-15,4;UBERON:0002435,5.65e-15,4;UBERON:0000204,5.65e-15,4;UBERON:0010082,5.65e-15,4;UBERON:0009663,5.93e-13,7;UBERON:0003914,4.69e-12,117;UBERON:0005383,1.08e-11,3;UBERON:0005382,1.08e-11,3;UBERON:0002417,2.71e-10,60;UBERON:0000916,2.71e-10,60;UBERON:0000025,2.75e-10,192;UBERON:0004211,3.56e-10,15;UBERON:0009773,3.56e-10,15;UBERON:0001231,3.56e-10,15;UBERON:0001285,3.56e-10,15;UBERON:0007684,3.56e-10,15;UBERON:0004208,3.56e-10,15;UBERON:0002420,5.59e-10,9;UBERON:0000125,5.59e-10,9;UBERON:0007245,5.59e-10,9;UBERON:0002308,5.59e-10,9;UBERON:0010009,5.59e-10,9;UBERON:0010011,5.59e-10,9;UBERON:0000454,5.59e-10,9;UBERON:0004111,1.36e-09,240;UBERON:0006555,1.80e-09,16;UBERON:0004819,1.80e-09,16;UBERON:0005172,7.56e-09,54;UBERON:0005173,7.56e-09,54;UBERON:0001873,2.94e-08,2;UBERON:0010122,2.94e-08,2;UBERON:0000055,3.71e-08,68;UBERON:0009569,8.09e-08,112;UBERON:0002049,9.68e-08,78;UBERON:0007798,9.68e-08,78;UBERON:0010532,1.20e-07,7;UBERON:0000074,1.20e-07,7;UBERON:0001229,1.20e-07,7;UBERON:0001230,1.20e-07,7;UBERON:0003220,1.20e-07,7;UBERON:0005749,1.20e-07,7;UBERON:0004199,1.20e-07,7;UBERON:0004209,1.20e-07,7;UBERON:0004198,1.20e-07,7;UBERON:0002107,1.47e-07,19;UBERON:0006925,1.47e-07,19;UBERON:0008836,1.47e-07,19;UBERON:0000353,1.78e-07,15;UBERON:0000415,2.32e-07,4;UBERON:0007240,2.32e-07,4;UBERON:0005742,2.32e-07,4;UBERON:0005734,2.32e-07,4;UBERON:0004664,2.32e-07,4;UBERON:0004663,2.32e-07,4;UBERON:0004876,2.64e-07,11;UBERON:0001225,9.01e-07,12;UBERON:0008987,9.01e-07,12 | |||
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| ||
|short_description=p16@DLC1 | |||
}} | }} |
Latest revision as of 09:52, 16 September 2015
Short description: | p16@DLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_DLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_uc003wwl.1_5end |
EntrezGene: | DLC1 |
HGNC: | 2897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.32e-11 | 58 |
barrier cell | 7.32e-11 | 58 |
epithelial cell of nephron | 3.56e-10 | 15 |
kidney cell | 7.48e-09 | 17 |
kidney epithelial cell | 7.48e-09 | 17 |
endothelial cell | 1.06e-08 | 36 |
amniotic epithelial cell | 1.86e-08 | 2 |
glomerular cell | 1.20e-07 | 7 |
kidney corpuscule cell | 1.20e-07 | 7 |
mesodermal cell | 1.21e-07 | 121 |
fibroblast of tunica adventitia of artery | 2.32e-07 | 4 |
fibroblast of the aortic adventitia | 2.32e-07 | 4 |
kidney cortical cell | 9.01e-07 | 12 |
renal cortical epithelial cell | 9.01e-07 | 12 |