FFCP PHASE1:Hg19::chr12:52626432..52626475,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3855 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6445 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000546666_5end | |||
|cluster_id=chr12:52626432..52626475,+ | |||
|coexpression_cluster_id=C3290 | |||
|description=CAGE_peak_2_at_KRT7_5end | |||
|id=chr12:52626432..52626475,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.53e-40!254;CL:0000213!1.91e-19!57;CL:0000215!1.91e-19!57;CL:0000076!4.00e-14!62;CL:0002078!4.47e-14!44;CL:0000548!6.35e-14!679;CL:0000004!6.35e-14!679;CL:0000255!6.35e-14!679;CL:0002321!7.44e-14!248;CL:0000220!8.77e-14!246;CL:0000063!1.33e-13!578;CL:0000012!2.28e-13!682;CL:0002139!2.46e-12!24;CL:0000222!3.32e-12!119;CL:0000115!1.21e-11!35;CL:0000071!1.01e-10!18;CL:0002546!1.01e-10!18;CL:0000077!1.71e-09!19;CL:1000449!1.31e-07!16;CL:1000413!1.72e-07!9;CL:0000144!1.75e-07!625;CL:0000057!3.44e-07!75;CL:0000003!7.27e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.11e-14;24!CL:0000213;1.45e-12;58!CL:0000215;1.45e-12;58!CL:0000071;3.46e-12;18!CL:0000115;1.98e-11;36!CL:0002078;2.34e-11;45!CL:0000077;6.69e-11;19!CL:1000449;2.01e-10;15!CL:1000413;4.03e-09;9!CL:0002681;7.49e-09;12!CL:0002584;7.49e-09;12!CL:1000497;1.33e-08;17!CL:0002518;1.33e-08;17!CL:0000076;2.22e-08;63!CL:0002368;1.26e-07;13!CL:1000507;3.45e-07;10!CL:1000494;3.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.51e-46,253;CL:0000213,6.22e-23,58;CL:0000215,6.22e-23,58;CL:0000076,2.66e-16,63;CL:0002078,5.22e-16,45;CL:0002139,2.43e-14,24;CL:0000115,1.77e-13,36;CL:0000071,3.06e-12,18;CL:0002546,3.06e-12,18;CL:0000077,6.07e-11,19;CL:1000449,1.90e-10,15;CL:0002321,2.03e-10,250;CL:0000222,3.56e-09,121;CL:1000413,4.24e-09,9;CL:0002681,8.10e-09,12;CL:0002584,8.10e-09,12;CL:1000497,1.26e-08,17;CL:0002518,1.26e-08,17;CL:0002076,2.39e-08,42;CL:0002368,1.41e-07,13;CL:1000507,3.39e-07,10;CL:1000494,3.39e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;3.46e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!9.85e-14!104;UBERON:0001048!1.79e-13!168;UBERON:0000466!2.13e-12!126;UBERON:0000487!1.73e-11!22;UBERON:0006914!5.62e-11!25;UBERON:0004119!7.99e-11!169;UBERON:0000925!7.99e-11!169;UBERON:0006595!7.99e-11!169;UBERON:0001986!1.01e-10!18;UBERON:0004638!1.01e-10!18;UBERON:0004852!1.01e-10!18;UBERON:0002553!1.59e-10!70;UBERON:0000058!9.03e-10!26;UBERON:0000477!9.06e-10!286;UBERON:0003886!1.10e-09!63;UBERON:0000077!6.73e-09!130;UBERON:0002100!1.06e-08!216;UBERON:0007625!1.67e-08!11;UBERON:0003914!2.54e-08!118;UBERON:0000065!3.35e-08!53;UBERON:0008947!3.85e-08!38;UBERON:0003258!3.85e-08!38;UBERON:0009569!6.24e-08!113;UBERON:0003104!7.50e-08!238;UBERON:0009142!7.50e-08!238;UBERON:0003064!8.36e-08!37;UBERON:0000080!8.63e-08!18;UBERON:0002120!8.63e-08!18;UBERON:0004875!8.63e-08!18;UBERON:0005721!8.63e-08!18;UBERON:0005754!8.63e-08!18;UBERON:0007297!8.63e-08!18;UBERON:0006555!9.52e-08!17;UBERON:0005103!9.52e-08!17;UBERON:0000083!9.52e-08!17;UBERON:0009201!9.52e-08!17;UBERON:0004819!9.52e-08!17;UBERON:0006553!9.52e-08!17;UBERON:0003074!9.52e-08!17;UBERON:0003060!9.52e-08!17;UBERON:0004211!1.31e-07!16;UBERON:0001285!1.31e-07!16;UBERON:0007684!1.31e-07!16;UBERON:0003220!1.31e-07!16;UBERON:0004208!1.31e-07!16;UBERON:0004876!1.52e-07!20;UBERON:0003915!1.72e-07!9;UBERON:0004700!1.72e-07!9;UBERON:0001917!1.72e-07!9;UBERON:0001004!1.82e-07!72;UBERON:0002049!2.06e-07!79;UBERON:0007798!2.06e-07!79;UBERON:0000063!2.23e-07!97;UBERON:0001007!2.33e-07!155;UBERON:0001555!2.33e-07!155;UBERON:0007026!2.33e-07!155;UBERON:0001041!3.08e-07!98;UBERON:0000119!3.24e-07!312;UBERON:0001737!4.78e-07!9;UBERON:0005085!5.21e-07!29;UBERON:0000467!6.01e-07!625;UBERON:0000483!7.94e-07!309;UBERON:0000480!8.08e-07!626;UBERON:0000468!9.03e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.70e-13;33!UBERON:0000487;1.99e-13;22!UBERON:0006914;4.76e-13;25!UBERON:0004638;3.46e-12;18!UBERON:0001986;3.46e-12;18!UBERON:0004852;3.46e-12;18!UBERON:0006555;2.01e-10;15!UBERON:0004819;2.01e-10;15!UBERON:0001285;2.01e-10;15!UBERON:0007684;2.01e-10;15!UBERON:0007625;2.17e-10;11!UBERON:0003915;4.03e-09;9!UBERON:0004700;4.03e-09;9!UBERON:0001917;4.03e-09;9!UBERON:0001225;7.49e-09;12!UBERON:0008987;7.49e-09;12!UBERON:0000353;9.39e-09;15!UBERON:0001737;1.50e-08;9!UBERON:0001557;1.50e-08;9!UBERON:0001851;1.81e-07;15!UBERON:0004211;3.45e-07;10!UBERON:0009773;3.45e-07;10!UBERON:0001231;3.45e-07;10!UBERON:0004810;3.45e-07;10!UBERON:0000065;5.53e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,1.68e-13,22;UBERON:0006914,3.98e-13,25;UBERON:0004638,3.06e-12,18;UBERON:0001986,3.06e-12,18;UBERON:0004852,3.06e-12,18;UBERON:0006555,1.39e-10,16;UBERON:0004819,1.39e-10,16;UBERON:0004211,1.90e-10,15;UBERON:0009773,1.90e-10,15;UBERON:0001231,1.90e-10,15;UBERON:0001285,1.90e-10,15;UBERON:0007684,1.90e-10,15;UBERON:0004208,1.90e-10,15;UBERON:0007625,2.21e-10,11;UBERON:0001048,3.47e-09,160;UBERON:0003915,4.24e-09,9;UBERON:0004700,4.24e-09,9;UBERON:0001917,4.24e-09,9;UBERON:0001225,8.10e-09,12;UBERON:0008987,8.10e-09,12;UBERON:0000353,8.81e-09,15;UBERON:0001737,1.55e-08,9;UBERON:0003914,5.65e-08,117;UBERON:0008947,8.03e-08,38;UBERON:0003258,8.03e-08,38;UBERON:0009569,8.21e-08,112;UBERON:0001851,1.83e-07,15;UBERON:0002553,3.31e-07,61;UBERON:0004810,3.39e-07,10;UBERON:0005631,4.16e-07,14;UBERON:0000158,4.16e-07,14;UBERON:0000065,4.33e-07,54;UBERON:0006554,5.73e-07,47;UBERON:0000058,7.82e-07,19 | |||
|phase1_expression=4.54195948176392,1.71280419112787,1.83240725324762,2.00146596706261,1.78784437770915,1.74467704820074,2.53299878168311,0,0,20.8873846026283,55.8240934377942,8.08233076881637,6.85794143393979,0.123766352960047,1.32558950291166,0,0,0,0,0.738726348460727,1.22400414746552,1.25381888591235,0.572471974262113,0.136874425072884,3.13856598987007,0,0,0,0,0,0.154816123316076,7.35536979583142,6.32532429434325,2.58827807116751,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,2.53007406669196,5.51471701699479,10.2841028462185,0,0.486634870302636,6.80650683581289,26.8292570929702,19.9384963523396,1.11332214173056,0,0,0,0,0,0,0,0,6.75792185046797,10.3228151412735,16.6627440771645,8.47961912886015,22.6529695553349,37.6911717457892,16.3016073898712,8.52775305258785,1.77883131343355,3.3472061276467,10.876391561947,14.4451700086517,4.88124115096339,8.08858776760911,44.5578071334968,1.25019619597712,1.57170560838319,0.675668882899933,10.7321646226118,3.79706263827252,10.6257011479636,0,0,5.23312862571041,5.4666914686485,0.759783069987479,0.132409180813219,0,0,4.48542080113846,20.2823091886439,8.38669664618344,0.311211035399766,1.34710672069688,0.653847612453835,1.36221684880438,1.15235184896,0.234321431833797,0,1.71141546463335,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0,0,0.741800787835671,0.910161361938026,2.15585442544872,0.168336113954066,0,0,0.877955241761676,2.14541457059314,1.05166641234618,4.3104229600808,10.0458195985763,9.8236398856541,1.05965950579781,2.40072876867522,0.618315175430633,5.92573242104947,3.90845398296339,12.4894485858537,5.45647228902712,2.52433774244115,3.31379635112278,0.80823028409406,0.710019185033229,0.906768884048762,10.1736355386293,3.67195621010264,0,1.72082757233402,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0,2.18986415445498,1.56449532329816,11.5783368874719,1.38134921352481,0.464367928031979,0,12.7771344043031,10.1150814046861,13.014595613708,11.8014550823662,9.80457498415828,8.77901290711057,11.1909985772936,7.84885860501384,11.1576675514453,0,9.81692416624121,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,15.2695351165688,1.75600456653801,1.1240175325762,0.100528972411631,1.29623823221941,0.977424915930974,0,20.2063878835383,1.27523445472584,15.0283128621852,1.58803092537181,2.77791307545966,1.52203321787679,0,0,0,0,0,0,0.16798212819886,0.283550194484773,1.70161193135412,1.74380363108377,6.13412286664338,0,0,0.621984346622316,0,0.25248486685276,0.063497894292169,0,0,1.71072446022705,0.925447434329912,0,0,1.56983518083505,0.87192013766656,2.3468251462704,0.258543431515556,0,0.845302752556,0.797814349754612,0,1.02882949704857,0,1.8649552531127,1.00084595560703,0,0.823240336780769,0.977208552881205,1.06617584622764,0,11.4546963282643,6.10073421020206,19.7946522540473,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,11.854339107256,1.07057393278297,1.41932173530541,1.52283839490527,0,0,1.03473071292505,0,0.737476674166813,0.0868836144680828,0.391602314925481,0,0,0,0,24.8564608585933,6.65741758041988,24.4936137597041,5.45837177201309,9.51464234385987,5.3325417942284,3.20347873139252,5.11707249066703,6.91671860917512,4.45254199334973,0.462629081407967,0.355123450626254,0.0821271560138091,0.519254429183621,0.464841513839837,0.241718899183244,4.41114234667227,2.67034867914099,1.49258782613989,0,0.262248829918848,6.76799419361118,4.1588282036384,3.92174884588428,8.76835347919564,4.64427167128653,6.8240030442538,3.57196781080683,6.47747748306418,7.71136263451447,2.43851793789468,3.01013864312912,10.4499271948466,10.8039881160734,9.40273969833149,0,0,6.92415337814251,47.2341089807576,17.2450549172081,1.44257416306811,0,0,3.44559322797703,1.30012049207304,9.64103579064957,0.386682873168488,0,0.15350367472613,0,0,0,0.255679882248303,0.178064071293475,4.46269271474641,6.72665235777872,19.1419068741876,3.54052232994425,1.85938219718914,1.25924938732256,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0.744316738719335,2.84741482246853,0.953150969619124,0.511795582622668,0,0,2.35484592059769,0.179872457583315,0.54907405947211,0.471249609382746,0.404364963146632,0,0.421258456238981,1.95053495635836,0,0,0.272999822815972,0,0,1.65409603063837,0.66343897524122,0.438450885253763,0.578775534266688,0,0,3.717881977197,0,1.00387946542836,2.75097314836739,0,0,1.26664581178598,2.96365403663912,0.379473173765715,0.699869440489966,1.25088746543166,11.3951386841084,5.44454924306613,1.12972560932135,1.72202149068492,8.42357378338128,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,5.968612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| |||
|short_description=p2@KRT7 | |||
}} |
Latest revision as of 21:55, 18 September 2015
Short description: | p2@KRT7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT7_5end |
Coexpression cluster: | C3290_Endothelial_Retinal_Alveolar_thyroid_papillary_anaplastic_Ciliary |
Association with transcript: | 0bp_to_ENST00000546666_5end |
EntrezGene: | KRT7 |
HGNC: | 6445 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.51e-46 | 253 |
lining cell | 6.22e-23 | 58 |
barrier cell | 6.22e-23 | 58 |
squamous epithelial cell | 2.66e-16 | 63 |
meso-epithelial cell | 5.22e-16 | 45 |
endothelial cell of vascular tree | 2.43e-14 | 24 |
endothelial cell | 1.77e-13 | 36 |
blood vessel endothelial cell | 3.06e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.06e-12 | 18 |
mesothelial cell | 6.07e-11 | 19 |
epithelial cell of nephron | 1.90e-10 | 15 |
embryonic cell | 2.03e-10 | 250 |
mesodermal cell | 3.56e-09 | 121 |
endothelial cell of artery | 4.24e-09 | 9 |
kidney cortical cell | 8.10e-09 | 12 |
renal cortical epithelial cell | 8.10e-09 | 12 |
kidney cell | 1.26e-08 | 17 |
kidney epithelial cell | 1.26e-08 | 17 |
endo-epithelial cell | 2.39e-08 | 42 |
respiratory epithelial cell | 1.41e-07 | 13 |
kidney tubule cell | 3.39e-07 | 10 |
nephron tubule epithelial cell | 3.39e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 1.68e-13 | 22 |
squamous epithelium | 3.98e-13 | 25 |
blood vessel endothelium | 3.06e-12 | 18 |
endothelium | 3.06e-12 | 18 |
cardiovascular system endothelium | 3.06e-12 | 18 |
excretory tube | 1.39e-10 | 16 |
kidney epithelium | 1.39e-10 | 16 |
nephron epithelium | 1.90e-10 | 15 |
renal tubule | 1.90e-10 | 15 |
nephron tubule | 1.90e-10 | 15 |
nephron | 1.90e-10 | 15 |
uriniferous tubule | 1.90e-10 | 15 |
nephrogenic mesenchyme | 1.90e-10 | 15 |
pigment epithelium of eye | 2.21e-10 | 11 |
primordium | 3.47e-09 | 160 |
endothelial tube | 4.24e-09 | 9 |
arterial system endothelium | 4.24e-09 | 9 |
endothelium of artery | 4.24e-09 | 9 |
cortex of kidney | 8.10e-09 | 12 |
renal parenchyma | 8.10e-09 | 12 |
parenchyma | 8.81e-09 | 15 |
larynx | 1.55e-08 | 9 |
epithelial tube | 5.65e-08 | 117 |
respiratory primordium | 8.03e-08 | 38 |
endoderm of foregut | 8.03e-08 | 38 |
subdivision of trunk | 8.21e-08 | 112 |
cortex | 1.83e-07 | 15 |
anatomical cavity | 3.31e-07 | 61 |
nephron tubule epithelium | 3.39e-07 | 10 |
extraembryonic membrane | 4.16e-07 | 14 |
membranous layer | 4.16e-07 | 14 |
respiratory tract | 4.33e-07 | 54 |
urinary system structure | 5.73e-07 | 47 |
duct | 7.82e-07 | 19 |