FFCP PHASE1:Hg19::chr13:113777105..113777170,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3528 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JVE8,P00742,B7ZBK1,F8WBM7,Q5JVE7 | |||
|association_with_transcript=0bp_to_ENST00000375551,ENST00000375559,ENST00000409306,ENST00000410083,ENST00000477269,ENST00000483537,NM_000504,uc001vsx.2,uc001vsy.2,uc001vsz.2,uc010agq.1_5end | |||
|cluster_id=chr13:113777105..113777170,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_F10_5end | |||
|id=chr13:113777105..113777170,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.18e-18!75;CL:0000055!2.69e-17!180;CL:0002620!8.87e-10!23;CL:0000183!1.37e-09!59;CL:0000680!3.32e-09!57;CL:0000056!3.32e-09!57;CL:0000355!3.32e-09!57;CL:0000187!1.72e-08!54;CL:0000393!1.33e-07!60;CL:0000211!1.33e-07!60;CL:0000192!8.71e-07!42;CL:0000514!8.71e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.13e-10;23!CL:0000057;2.25e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.97e-20,76;CL:0002620,1.84e-10,23;CL:0000136,2.38e-07,15;CL:0000680,2.82e-07,58;CL:0000056,2.82e-07,58;CL:0000355,2.82e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.21e-23!365;UBERON:0000481!2.36e-19!347;UBERON:0005256!1.42e-15!143;UBERON:0000119!7.62e-14!312;UBERON:0007023!1.57e-13!115;UBERON:0000483!2.31e-13!309;UBERON:0000468!9.21e-13!659;UBERON:0002100!5.68e-12!216;UBERON:0002385!1.73e-11!63;UBERON:0001015!1.73e-11!63;UBERON:0000383!1.73e-11!63;UBERON:0000914!4.68e-11!83;UBERON:0002329!4.68e-11!83;UBERON:0003077!4.68e-11!83;UBERON:0003059!4.68e-11!83;UBERON:0007282!4.68e-11!83;UBERON:0009618!4.68e-11!83;UBERON:0007285!4.68e-11!83;UBERON:0003104!7.28e-11!238;UBERON:0009142!7.28e-11!238;UBERON:0001134!1.20e-10!61;UBERON:0002036!1.20e-10!61;UBERON:0003082!1.20e-10!61;UBERON:0004290!1.27e-10!70;UBERON:0000477!7.27e-10!286;UBERON:0000467!2.48e-09!625;UBERON:0002107!3.15e-09!19;UBERON:0006925!3.15e-09!19;UBERON:0008836!3.15e-09!19;UBERON:0000480!3.64e-09!626;UBERON:0000490!3.86e-09!138;UBERON:0000062!5.58e-09!511;UBERON:0004111!3.98e-08!241;UBERON:0009854!4.89e-08!23;UBERON:0000486!8.37e-08!82;UBERON:0008835!9.62e-08!22;UBERON:0003894!9.62e-08!22;UBERON:0003914!1.27e-07!118;UBERON:0000025!1.29e-07!194;UBERON:0003102!1.92e-07!95;UBERON:0005057!2.71e-07!26;UBERON:0009497!7.40e-07!25;UBERON:0000015!7.40e-07!25;UBERON:0002423!7.40e-07!25;UBERON:0006235!7.40e-07!25;UBERON:0004161!7.40e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.82e-10;19!UBERON:0006925;8.82e-10;19!UBERON:0000160;1.49e-07;17!UBERON:0002423;7.33e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.95e-14,122;UBERON:0003104,1.06e-13,160;UBERON:0009142,1.06e-13,160;UBERON:0007023,3.34e-10,114;UBERON:0002107,7.59e-10,19;UBERON:0006925,7.59e-10,19;UBERON:0008836,7.59e-10,19;UBERON:0002100,9.58e-10,199;UBERON:0002385,1.44e-09,64;UBERON:0001015,1.44e-09,64;UBERON:0000383,1.44e-09,64;UBERON:0003102,3.79e-09,99;UBERON:0007524,5.90e-09,73;UBERON:0001134,1.01e-08,62;UBERON:0002036,1.01e-08,62;UBERON:0003082,1.01e-08,62;UBERON:0003077,1.73e-08,72;UBERON:0007285,1.73e-08,72;UBERON:0002329,2.17e-08,71;UBERON:0003059,2.17e-08,71;UBERON:0007282,2.17e-08,71;UBERON:0004290,2.17e-08,71;UBERON:0009618,2.17e-08,71;UBERON:0000490,2.20e-08,148;UBERON:0000119,6.58e-08,309;UBERON:0009854,6.86e-08,23;UBERON:0007503,1.24e-07,78;UBERON:0001007,1.32e-07,145;UBERON:0001555,1.32e-07,145;UBERON:0007026,1.32e-07,145;UBERON:0000160,1.38e-07,17;UBERON:0008835,1.48e-07,22;UBERON:0003894,1.48e-07,22;UBERON:0000483,1.60e-07,306;UBERON:0002199,3.97e-07,46;UBERON:0002416,3.97e-07,46;UBERON:0004119,4.65e-07,160;UBERON:0000925,4.65e-07,160;UBERON:0006595,4.65e-07,160;UBERON:0004921,5.18e-07,118;UBERON:0009497,6.65e-07,25;UBERON:0000015,6.65e-07,25;UBERON:0002423,6.65e-07,25;UBERON:0006235,6.65e-07,25;UBERON:0004161,6.65e-07,25;UBERON:0009856,9.10e-07,26 | |||
|phase1_expression=21.2563703746551,3.21150785836475,6.90676580070259,31.0227224894704,11.1740273606822,34.0212024399144,5.06599756336621,8.2123583545488,24.290263422585,1.47440361900905,1.39560233594486,0.873765488520689,2.90143676051299,0.37129905888014,0.331397375727916,2.6893005858071,2.41077811209591,2.19093027116212,0.975865597581014,0.861847406537515,0.816002764977012,0.940364164434263,0.85870796139317,0,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,11.4019146149618,9.84541726195184,0,0,0,0,0,3.97046232089085,2.66075276955077,4.21606971327005,14.4076983047484,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,6.46063537203914,2.78587125662075,4.76673050927588,31.2651916616207,5.67469411517371,5.04609840128076,1.06748995729705,0.74000264525148,7.15785381419462,1.21239604862719,0.326923806226917,16.4979596132975,7.49028701823999,17.1054645238672,4.05808099879417,6.84566185853339,11.6569970830405,2.23125547423153,1.45685649931318,0.842704840213491,15.1074086728621,11.0550885580591,20.7684820163289,0,2.22540236350701,14.5625817910084,47.4287973598717,10.9418474070143,5.00474079487857,11.3596287348515,8.34057479673592,3.0648779579902,1.05166641234618,1.47461838108027,52.9199425282143,53.3893472046419,24.5841005345092,84.0255069036326,45.9614280403437,53.5892323294909,41.6901758182761,6.75105328965065,4.96928726322113,49.7294535260906,37.1881590514889,63.0419621593366,149.104028856978,43.424154336113,14.5822109387019,0,0,0,0.731842236777572,1.72288698817931,7.90118811512725,4.66474747569167,5.55105871926382,2.91981887260664,0,0.643240938192885,0,15.7885095530873,30.3189382301226,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,1.4763109092493,2.80483547606892,26.752310736541,79.3847041481927,357.449198197563,201.479579418913,280.625205673667,0,57.1896239225478,4.11762744716461,0,0,0,0,18.2452650973782,12.4792174233549,2.88662684050547,18.7807256059624,3.75707821554629,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,2.48793738648926,0.432359860250884,0.75745460055828,0.190493682876507,0,0,5.13217338068116,1.02827492703324,0,0,3.92458795208763,4.3596006883328,1.7601188597028,4.26596662000667,139.486013882234,3.381211010224,36.965398205297,39.5228260263191,0.257207374262142,1.41849132023278,0,17.443315226294,131.857050110121,18.9345277459577,0.977208552881205,19.9019491295826,5.543663110534,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,7.81819056004928,4.10952645100767,6.26713371339634,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,2.50085260529839,0.542530047399471,5.8231841228626,7.67244651827796,18.1357777289025,1.7571212248907,0,4.5481500811197,3.10419213877515,0.664225598535437,0.737476674166813,36.8386525344671,90.2643335903234,16.8140277667319,0,0,0,0.909382714338778,3.32870879020994,1.5119514666484,17.8637621629519,7.51963669111506,4.49056151092918,6.02254001501795,10.2341449813341,3.21707842287215,40.0728779401476,4.47208112027701,9.41077144159573,2.7101961484557,7.78881643775432,4.18357362455853,50.6401093788897,0,0,8.95552695683933,11.4717435844232,28.8473712910733,0,0.924184045252977,3.13739907670742,1.46139224653261,0.844413031143006,0,0.170093705276516,0,0,2.43851793789468,5.51858751240339,0,0,0.447749509444357,0,0,7.1806035032589,11.4805125994897,6.18218949862176,107.471775148574,0,0,1.14853107599234,0.650060246036521,0,0.386682873168488,1.23238893691716,3.37708084397485,0.964856007391714,4.29680979473094,7.97591816528257,1.70453254832202,0.445160178233687,0,0,0,0,6.04299214086472,43.1292915157977,2.7881490806424,0,1.59691809095107,2.60979897622522,0.74129687641568,2.43312307461385,2.97726695487734,3.16379424718726,14.6785249321345,16.6333564352367,20.5410714256282,20.046804619334,0.78494864019923,20.8652050796645,16.7467588138993,11.7812402345686,1.01091240786658,0,0.421258456238981,25.3569544326587,0,2.11300293513511,19.109987597118,4.3835683905651,2.26016233240486,2.2054613741845,2.65375590096488,0.876901770507525,17.9420415622673,10.4943160327461,0.202910376962704,2.16876448669825,0.563391205064483,10.4690287108958,25.6429997044246,0.35667105148125,6.03093808920016,0.633322905892992,7.57378253807774,13.2815610818,22.3958220956789,0,0,0,104.311331260671,0,0,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.33907966389,0,0.111443384277478,0,1.19372242368845,0.890894042497916,1.53580351049616,0.994147647766298,0.562677665642051,0,0,0,31.481182143669,7.45966571934099,85.6571342704539,0.20453736500431,0,10.2643063928396,0.0898683511473268,0.358042349351218,0,17.9530998259219,0,0,11.6319929531426,1.11321717794222,0,0,0,13.0499923578263,0,0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| |||
|short_description=p1@F10 | |||
}} |
Latest revision as of 15:21, 16 September 2015
Short description: | p1@F10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_F10_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000375551, ENST00000375559, ENST00000409306, ENST00000410083, ENST00000477269, ENST00000483537, NM_000504, uc001vsx.2, uc001vsy.2, uc001vsz.2, uc010agq.1_5end |
EntrezGene: | F10 |
HGNC: | 3528 |
UniProt: | Q5JVE8P00742B7ZBK1F8WBM7Q5JVE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.97e-20 | 76 |
skin fibroblast | 1.84e-10 | 23 |
fat cell | 2.38e-07 | 15 |
muscle precursor cell | 2.82e-07 | 58 |
myoblast | 2.82e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-07 | 58 |