FFCP PHASE1:Hg19::chr13:28716666..28716670,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:28716666..28716670,+ | |||
|description=CAGE_peak_at_chr13:28716666..28716670,+ | |||
|id=chr13:28716666..28716670,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.58e-12!172;CL:0000566!2.58e-12!172;CL:0000988!1.03e-11!182;CL:0002032!1.11e-11!165;CL:0000837!1.11e-11!165;CL:0000738!2.50e-11!140;CL:0002087!1.58e-09!119;CL:0002031!1.15e-08!124;CL:0000542!3.90e-07!53;CL:0000051!3.90e-07!53;CL:0000838!5.78e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000775;2.15e-10;3!CL:0000226;8.18e-10;3!CL:0000623;8.18e-10;3!CL:0000842;8.18e-10;3!CL:0000222;5.58e-08;1!CL:0000542;1.70e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.87e-11,52;CL:0000542,6.75e-11,53;CL:0000051,6.75e-11,53;CL:0000775,2.01e-10,3;CL:0000623,7.51e-10,3;CL:0000825,7.51e-10,3;CL:0000226,9.81e-10,3;CL:0000842,9.81e-10,3;CL:0000037,3.09e-09,168;CL:0000988,1.37e-08,177;CL:0000738,5.05e-08,136;CL:0002032,1.99e-07,161;CL:0000837,1.99e-07,161;CL:0002087,3.43e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.58e-08;1!CL:0000051;1.70e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.58e-08;1!UBERON:0001785;5.58e-08;1!UBERON:0002464;5.58e-08;1!UBERON:0004904;5.58e-08;1!UBERON:0001021;5.58e-08;1!UBERON:0000178;2.35e-07;15!UBERON:0000179;2.35e-07;15!UBERON:0000463;2.35e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.34e-08,1;UBERON:0001785,3.34e-08,1;UBERON:0002464,3.34e-08,1;UBERON:0004904,3.34e-08,1;UBERON:0001021,3.34e-08,1;UBERON:0003902,3.34e-08,1;UBERON:0005425,3.34e-08,1;UBERON:0000178,2.81e-07,15;UBERON:0000179,2.81e-07,15;UBERON:0000463,2.81e-07,15 | |||
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| |||
|short_description=p@chr13:28716666..28716670,+ | |||
}} |
Latest revision as of 15:23, 24 July 2015
Short description: | p@chr13:28716666..28716670, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28716666..28716670, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.87e-11 | 52 |
lymphocyte | 6.75e-11 | 53 |
common lymphoid progenitor | 6.75e-11 | 53 |
neutrophil | 2.01e-10 | 3 |
natural killer cell | 7.51e-10 | 3 |
pro-NK cell | 7.51e-10 | 3 |
single nucleate cell | 9.81e-10 | 3 |
mononuclear cell | 9.81e-10 | 3 |
hematopoietic stem cell | 3.09e-09 | 168 |
hematopoietic cell | 1.37e-08 | 177 |
leukocyte | 5.05e-08 | 136 |
hematopoietic oligopotent progenitor cell | 1.99e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-07 | 161 |
nongranular leukocyte | 3.43e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.34e-08 | 1 |
cranial nerve | 3.34e-08 | 1 |
nerve trunk | 3.34e-08 | 1 |
nerve connecting eye with brain | 3.34e-08 | 1 |
nerve | 3.34e-08 | 1 |
retinal neural layer | 3.34e-08 | 1 |
presumptive neural retina | 3.34e-08 | 1 |
blood | 2.81e-07 | 15 |
haemolymphatic fluid | 2.81e-07 | 15 |
organism substance | 2.81e-07 | 15 |