FFCP PHASE1:Hg19::chr13:72381549..72381552,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:72381549..72381552,- | |||
|coexpression_cluster_id=C1187 | |||
|description=CAGE_peak_at_chr13:72381549..72381552,- | |||
|id=chr13:72381549..72381552,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.29e-12;3!CL:0000123;2.04e-09;2!CL:0000242;2.04e-09;2!CL:0000095;6.06e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.39e-12,3;CL:0000242,2.13e-09,2;CL:0000095,5.43e-07,17;CL:0000123,5.43e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;4.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.61e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.16e-12!115;UBERON:0001049!6.24e-10!57;UBERON:0005068!6.24e-10!57;UBERON:0006241!6.24e-10!57;UBERON:0007135!6.24e-10!57;UBERON:0002780!8.41e-10!41;UBERON:0001890!8.41e-10!41;UBERON:0006240!8.41e-10!41;UBERON:0003080!2.10e-09!42;UBERON:0000073!2.76e-09!94;UBERON:0001016!2.76e-09!94;UBERON:0003056!4.63e-09!61;UBERON:0003075!6.33e-09!86;UBERON:0007284!6.33e-09!86;UBERON:0002616!1.35e-08!59;UBERON:0002346!1.37e-08!90;UBERON:0001017!1.71e-08!82;UBERON:0002020!2.40e-08!34;UBERON:0003528!2.40e-08!34;UBERON:0005743!2.61e-08!86;UBERON:0000955!1.61e-07!69;UBERON:0006238!1.61e-07!69;UBERON:0001893!2.75e-07!34;UBERON:0001869!3.02e-07!32;UBERON:0002791!6.33e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;3.47e-09;4!UBERON:0001905;9.94e-09;2!UBERON:0002757;9.94e-09;2!UBERON:0010134;9.94e-09;2!UBERON:0005408;9.94e-09;2!UBERON:0001899;9.94e-09;2!UBERON:0005409;1.45e-07;22!UBERON:0002108;1.97e-07;4!UBERON:0000160;2.74e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,5.11e-09,4;UBERON:0001905,1.06e-08,2;UBERON:0002757,1.06e-08,2;UBERON:0010134,1.06e-08,2;UBERON:0005408,1.06e-08,2;UBERON:0001899,1.06e-08,2;UBERON:0003056,1.15e-07,61;UBERON:0002108,1.82e-07,4;UBERON:0000160,2.68e-07,17;UBERON:0010371,9.26e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,1.77936752594749,1.75759695432724,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,1.08505435357926,0,0.647787332037959,0,0.436194716338694,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,2.6469748805939,1.77383517970051,0.87834785693126,0.0654895377488563,0,0,0,0,0,2.62339686735876,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,1.55050055501597,1.06729878806013,0.33472061276467,0,0,0,0,0,0.357198913136319,0.44905874525234,0.788280363383256,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,1.04337364477569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0.088048434013226,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0.508189248444927,0,2.31986643833309,0.167516265334349,0.637938751653163,1.49801404789436,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,9.7944634668775,2.40453741329035,0.307240764308458,0.447352215784832,0.333698283423817,0,0,1.23087398947712,0.270455678475983,0,1.4098700508785,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,35.4690685655029,0.19924798825107,0.276283915531148,4.28285671352269,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,1.66173999992772,0,0,0,0,5.8606373451049,0,1.90987494426621,0,1.4471572635049,0,0.442317039724898,0,0,0,0,0.846452843541768,0.113942055847001,0,0,0,0,0,0,0,0.941881538370149,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,1.51472047819464,0,0.530745387020035,3.66618086960175,0,0,0.208843899010911,0,0,0.702793337176017,0,0,0,0.394584402849391,2.41981432097328,0.61214552326098,0,0,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,18.5549285788783,1.71594997861965,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0,0.229160424011684,2.87149209830726,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.315222829196793,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0.66116300871345,0,0,0.320362237703084,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.3755727921195,0,0.221858103073705,0.0620964029413835,1.24513771442608,0,0,0,0,3.74667924645505,4.0577888011031,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9647255104132,0.970423302570136,0,0.436838552768056,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0.321146125482298,0,0.638535436228605,0,0.504143392443436,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,3.28184885410932,0,0,0,0,1.60710550763486,2.35398605553177,0,0.227662191351298,0.177404740325278,0,0,0.271878931907327,0,0,0,0.078493092850514,0.942693539496011,0,5.47895232305697,0,0,0.571812353413251,8.37472142183451,4.99838129082939,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0.233939463462106,7.16222790580926,0.237840181555137,0.79062257427272,1.97892930141772,0.150962843566674,1.08043821351123,1.96703604453562,0.940634592723046,0,0.471353094203252,0.196308467114945,0,0,0,0.563903507879121,0.128915775947154,0,0,0,0,0,0,0.143339583151451,2.36657343289777,0,0.872701380680755,2.645134202577,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,1.03432995861895,0.213233981900981,0.476128862927481,0.193766729508018,0.31037357147929,0.112131862580613,0,0.808468755832877,0,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,2.84827324821017,0,0,0 | |||
|short_description=p@chr13:72381549..72381552,- | |||
}} |
Latest revision as of 16:58, 24 July 2015
Short description: | p@chr13:72381549..72381552, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:72381549..72381552, - |
Coexpression cluster: | C1187_anaplastic_gastric_small_carcinoid_acute_retinoblastoma_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.39e-12 | 3 |
Merkel cell | 2.13e-09 | 2 |
neuron associated cell | 5.43e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.43e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 5.11e-09 | 4 |
pineal body | 1.06e-08 | 2 |
regional part of epithalamus | 1.06e-08 | 2 |
secretory circumventricular organ | 1.06e-08 | 2 |
circumventricular organ | 1.06e-08 | 2 |
epithalamus | 1.06e-08 | 2 |
pre-chordal neural plate | 1.15e-07 | 61 |
small intestine | 1.82e-07 | 4 |
intestine | 2.68e-07 | 17 |
ecto-epithelium | 9.26e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.61e-07 | 14 |