FFCP PHASE1:Hg19::chr13:99330043..99330058,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_AK310205_5end | |||
|cluster_id=chr13:99330043..99330058,+ | |||
|description=CAGE_peak_1_at_AK310205_5end | |||
|id=chr13:99330043..99330058,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.66e-17!71;CL:0000128!1.28e-16!7;CL:0000126!1.28e-16!7;CL:0000127!1.28e-16!7;CL:0002453!1.28e-16!7;CL:0002319!6.08e-16!25;CL:0000243!1.67e-11!15;CL:0000125!1.67e-11!15;CL:0000030!1.67e-11!15;CL:0000339!1.67e-11!15;CL:0000133!6.50e-11!59;CL:0000220!2.00e-10!246;CL:0002321!3.06e-10!248;CL:0000095!4.73e-10!17;CL:0000123!4.73e-10!17;CL:0000244!1.91e-09!4;CL:0000731!1.91e-09!4;CL:0002368!2.23e-09!13;CL:0002605!1.86e-08!3;CL:0000064!3.67e-08!3;CL:0005012!3.67e-08!3;CL:0000067!3.67e-08!3;CL:0002304!3.67e-08!3;CL:0002166!4.32e-08!3;CL:0002621!9.60e-08!3;CL:0002076!1.05e-07!43;CL:0000047!1.16e-07!8;CL:0002603!1.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000128;3.01e-25;7!CL:0000126;3.01e-25;7!CL:0000127;3.01e-25;7!CL:0002319;3.50e-20;25!CL:0002605;3.64e-16;3!CL:0000064;1.65e-15;3!CL:0000067;1.65e-15;3!CL:0005012;1.65e-15;3!CL:0002304;1.65e-15;3!CL:0002621;8.56e-15;3!CL:0000047;2.06e-11;2!CL:0000244;4.52e-11;4!CL:0000731;4.52e-11;4!CL:0002549;1.26e-10;2!CL:0002589;1.26e-10;2!CL:0000317;1.64e-10;2!CL:1000448;1.64e-10;2!CL:0002308;1.64e-10;2!CL:0002140;1.64e-10;2!CL:0000243;4.91e-10;15!CL:0000125;4.91e-10;15!CL:0000095;6.54e-09;17!CL:0002159;1.11e-08;14!CL:0000540;6.97e-08;6!CL:0000404;6.97e-08;6!CL:0002166;6.97e-08;3!CL:0002077;1.87e-07;34!CL:0002328;4.01e-07;3!CL:0002603;4.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.20e-25,7;CL:0000126,2.20e-25,7;CL:0000127,2.20e-25,7;CL:0002453,2.20e-25,7;CL:0002319,2.95e-20,25;CL:0000221,6.96e-20,72;CL:0002605,3.64e-16,3;CL:0000064,1.53e-15,3;CL:0000067,1.53e-15,3;CL:0005012,1.53e-15,3;CL:0002304,1.53e-15,3;CL:0000047,1.58e-15,8;CL:0002621,1.17e-14,3;CL:0000133,6.06e-13,59;CL:0000244,5.30e-11,4;CL:0000731,5.30e-11,4;CL:0002589,1.32e-10,2;CL:0000317,1.46e-10,2;CL:1000448,1.46e-10,2;CL:0002308,1.46e-10,2;CL:0002549,1.46e-10,2;CL:0002140,1.46e-10,2;CL:0000243,4.35e-10,15;CL:0000125,4.35e-10,15;CL:0000030,4.35e-10,15;CL:0000339,4.35e-10,15;CL:0002321,5.48e-09,250;CL:0000095,5.87e-09,17;CL:0000123,5.87e-09,17;CL:0002159,1.07e-08,14;CL:0002077,4.15e-08,34;CL:0000540,6.65e-08,6;CL:0000031,6.65e-08,6;CL:0000404,6.65e-08,6;CL:0002166,6.98e-08,3;CL:0002328,3.21e-07,3;CL:0002603,3.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000339;4.91e-10;15!CL:0000221;6.21e-09;72!CL:0000133;1.68e-08;59!CL:0000031;6.97e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.46e-10!169;UBERON:0002200!2.18e-09!11;UBERON:0006876!2.18e-09!11;UBERON:0000924!2.37e-09!173;UBERON:0006601!2.37e-09!173;UBERON:0000073!3.64e-09!94;UBERON:0001016!3.64e-09!94;UBERON:0001017!8.03e-09!82;UBERON:0001778!3.67e-08!3;UBERON:0001775!3.67e-08!3;UBERON:0005743!3.77e-08!86;UBERON:0000033!6.94e-08!123;UBERON:0000153!7.52e-08!129;UBERON:0007811!7.52e-08!129;UBERON:0001949!9.60e-08!3;UBERON:0000365!1.55e-07!5;UBERON:0005284!3.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.65e-15;3!UBERON:0001775;1.65e-15;3!UBERON:0001949;8.56e-15;3!UBERON:0010371;1.25e-13;31!UBERON:0000486;1.52e-13;12!UBERON:0000488;9.35e-12;4!UBERON:0006876;5.93e-11;11!UBERON:0005629;1.26e-10;2!UBERON:0005358;1.26e-10;2!UBERON:0001886;1.26e-10;2!UBERON:0001529;1.26e-10;2!UBERON:0007204;1.26e-10;2!UBERON:0004086;1.26e-10;2!UBERON:0005282;1.26e-10;2!UBERON:0005281;1.26e-10;2!UBERON:0002419;1.64e-10;2!UBERON:0007771;1.64e-10;2!UBERON:0003297;1.64e-10;2!UBERON:0001821;1.64e-10;2!UBERON:0003487;1.64e-10;2!UBERON:0001820;1.64e-10;2!UBERON:0000365;5.94e-09;5!UBERON:0002203;5.56e-08;6!UBERON:0001768;5.56e-08;6!UBERON:0002200;5.56e-08;6!UBERON:0005910;1.56e-07;6!UBERON:0007625;2.78e-07;11!UBERON:0004815;4.01e-07;3!UBERON:0002031;4.01e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.53e-15,3;UBERON:0001775,1.53e-15,3;UBERON:0001949,1.17e-14,3;UBERON:0000488,8.86e-12,4;UBERON:0006876,6.13e-11,11;UBERON:0004121,1.18e-10,171;UBERON:0000924,1.18e-10,171;UBERON:0006601,1.18e-10,171;UBERON:0001529,1.32e-10,2;UBERON:0007204,1.32e-10,2;UBERON:0002419,1.46e-10,2;UBERON:0007771,1.46e-10,2;UBERON:0005629,1.46e-10,2;UBERON:0003297,1.46e-10,2;UBERON:0001821,1.46e-10,2;UBERON:0005358,1.46e-10,2;UBERON:0003487,1.46e-10,2;UBERON:0001886,1.46e-10,2;UBERON:0001820,1.46e-10,2;UBERON:0004086,1.46e-10,2;UBERON:0005282,1.46e-10,2;UBERON:0005281,1.46e-10,2;UBERON:0005089,1.46e-10,2;UBERON:0005088,1.46e-10,2;UBERON:0000365,6.74e-09,5;UBERON:0001017,1.39e-08,81;UBERON:0002203,5.37e-08,6;UBERON:0001768,5.37e-08,6;UBERON:0002200,5.37e-08,6;UBERON:0005910,1.73e-07,6;UBERON:0001016,1.84e-07,89;UBERON:0007625,2.56e-07,11;UBERON:0004815,3.21e-07,3;UBERON:0002031,3.21e-07,3;UBERON:0010371,3.90e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72369481307503,0.612002073732759,2.82109249330279,9.73202356245593,21.3524103113699,20.2123649747633,0,0,0,0,0,0,2.75826367343678,1.8072355126695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,2.3858578411533,3.89307896242109,12.573130682821,4.87804674417641,2.63504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,3.48122083583342,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,2.12586938479627,3.54569956768085,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60951198716227,0,0,0.0925884451585296,0,0,0,2.89826012437692,0.939269553886573,0,0,0,0,0,0,0,0,0.93733833986777,34.9402826653628,15.8788108911473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.646358578788889,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.974748487376,11.712586847186,1.54657762555539,6.8681668787083,7.01732626818479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,1.10621501125022,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.41620704970512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,4.55042172225565,0,0,0,0,0,0,0,0,0,0.826424576804891,0.960950336825531,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0,0,0,2.22389062924704,3.86437194203376,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,1.05650146756755,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.384888450902048,0.670302275535787,0,0,1.29151611801369,3.36942951335251,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,44.9982203009481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0,5.84752510403496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,3.60576387480195,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@AK310205 | |||
}} |
Latest revision as of 17:41, 24 July 2015
Short description: | p1@AK310205 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK310205_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_AK310205_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data