FFCP PHASE1:Hg19::chr14:103539496..103539525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:103539496..103539525,- | |||
|description=CAGE_peak_at_chr14:103539496..103539525,- | |||
|id=chr14:103539496..103539525,- | |||
|ontology_enrichment_celltype=CL:0000066!1.42e-15!254;CL:0002150!5.80e-13!3;CL:0000861!5.80e-13!3;CL:0002149!2.82e-11!6;CL:0002255!2.82e-11!6;CL:1000497!1.70e-10!18;CL:0002518!1.70e-10!18;CL:1000507!2.61e-08!12;CL:1000494!2.61e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000650;4.69e-07;2!CL:1000500;4.69e-07;2!CL:1000618;4.69e-07;2!CL:1001318;4.69e-07;2!CL:0002173;4.69e-07;2!CL:1000497;9.88e-07;17!CL:0002518;9.88e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.11e-11,253;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2;CL:1000497,9.98e-07,17;CL:0002518,9.98e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.00e-31;29!UBERON:0006595;3.32e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.99e-27!106;DOID:0050687!1.08e-19!143;DOID:299!1.15e-17!25;DOID:3001!2.82e-11!6;DOID:4468!1.73e-09!2;DOID:162!3.57e-09!235;DOID:3493!5.79e-09!2;DOID:14566!7.64e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:4468;4.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.54e-23,106;DOID:0050687,4.46e-19,143;DOID:162,9.10e-11,235;DOID:14566,1.68e-10,239;DOID:4468,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.71e-38!9;UBERON:0001557!2.55e-17!19;UBERON:0002113!1.06e-10!27;UBERON:0003918!1.06e-10!27;UBERON:0005095!1.06e-10!27;UBERON:0007687!1.06e-10!27;UBERON:0008947!9.90e-10!38;UBERON:0003258!9.90e-10!38;UBERON:0000489!8.78e-09!32;UBERON:0009773!2.61e-08!12;UBERON:0001231!2.61e-08!12;UBERON:0004810!2.61e-08!12;UBERON:0000072!1.07e-07!46;UBERON:0006554!1.84e-07!44;UBERON:0001008!2.95e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.84e-82;9!UBERON:0001557;5.84e-82;9!UBERON:0000072;8.23e-22;37!UBERON:0000065;6.66e-19;44!UBERON:0001004;8.33e-10;65!UBERON:0003567;4.69e-07;2!UBERON:0003838;4.69e-07;2!UBERON:0003586;4.69e-07;2!UBERON:0005169;4.69e-07;2!UBERON:0002321;4.69e-07;2!UBERON:0005215;4.69e-07;2!UBERON:0002303;4.69e-07;2!UBERON:0002319;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.27e-82,9;UBERON:0001557,1.40e-38,19;UBERON:0008947,5.03e-24,38;UBERON:0003258,5.03e-24,38;UBERON:0000072,3.10e-19,47;UBERON:0000065,1.31e-16,54;UBERON:0001041,2.59e-12,87;UBERON:0001004,7.77e-12,74;UBERON:0004921,1.56e-10,118;UBERON:0001007,2.63e-08,145;UBERON:0001555,2.63e-08,145;UBERON:0007026,2.63e-08,145;UBERON:0004119,2.17e-07,160;UBERON:0000925,2.17e-07,160;UBERON:0006595,2.17e-07,160;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,1.85443159085912,0.723033089650446,2.31617342738027,3.05031221729369,1.42362371466658,2.56179485504312,2.74710051175484,3.8474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,1.00337954770971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29650819221462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.173559738335131,0,0,0,0,0.387025325156341,0.292357268344742,0.492692742319255,0,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.30369197441421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58738126023125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,1.18193840883968,0,0,0,0,0,3.45484145949794,1.9110067515482,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0.93061915699296,0,0.559277158988962,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr14:103539496..103539525,- | |||
}} |
Latest revision as of 18:15, 24 July 2015
Short description: | p@chr14:103539496..103539525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:103539496..103539525, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.11e-11 | 253 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |
kidney cell | 9.98e-07 | 17 |
kidney epithelial cell | 9.98e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.27e-82 | 9 |
upper respiratory tract | 1.40e-38 | 19 |
respiratory primordium | 5.03e-24 | 38 |
endoderm of foregut | 5.03e-24 | 38 |
segment of respiratory tract | 3.10e-19 | 47 |
respiratory tract | 1.31e-16 | 54 |
foregut | 2.59e-12 | 87 |
respiratory system | 7.77e-12 | 74 |
subdivision of digestive tract | 1.56e-10 | 118 |
digestive system | 2.63e-08 | 145 |
digestive tract | 2.63e-08 | 145 |
primitive gut | 2.63e-08 | 145 |
endoderm-derived structure | 2.17e-07 | 160 |
endoderm | 2.17e-07 | 160 |
presumptive endoderm | 2.17e-07 | 160 |
abdomen connective tissue | 5.60e-07 | 2 |
abdominal segment connective tissue | 5.60e-07 | 2 |
trunk connective tissue | 5.60e-07 | 2 |
interstitial tissue | 5.60e-07 | 2 |
extraglomerular mesangium | 5.60e-07 | 2 |
kidney interstitium | 5.60e-07 | 2 |
juxtaglomerular apparatus | 5.60e-07 | 2 |
mesangium | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.54e-23 | 106 |
cell type cancer | 4.46e-19 | 143 |
cancer | 9.10e-11 | 235 |
disease of cellular proliferation | 1.68e-10 | 239 |
clear cell adenocarcinoma | 5.28e-07 | 2 |