FFCP PHASE1:Hg19::chr14:81425898..81425909,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20359 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_ENST00000554368_5end | |||
|cluster_id=chr14:81425898..81425909,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_8_at_CEP128_5end | |||
|id=chr14:81425898..81425909,- | |||
|ontology_enrichment_celltype=CL:0000838!9.20e-35!52;CL:0000542!5.56e-34!53;CL:0000051!5.56e-34!53;CL:0000791!7.40e-21!18;CL:0000789!7.40e-21!18;CL:0002420!7.40e-21!18;CL:0002419!7.40e-21!18;CL:0000790!7.40e-21!18;CL:0000084!2.40e-20!25;CL:0000827!2.40e-20!25;CL:0002087!3.96e-15!119;CL:0000945!5.76e-15!24;CL:0000826!5.76e-15!24;CL:0000624!1.33e-14!6;CL:0000738!3.24e-14!140;CL:0002031!7.74e-12!124;CL:0000898!1.66e-11!3;CL:0000236!5.17e-11!14;CL:0000817!2.29e-10!3;CL:0000037!3.00e-10!172;CL:0000566!3.00e-10!172;CL:0000988!3.60e-10!182;CL:0002032!3.23e-08!165;CL:0000837!3.23e-08!165;CL:0000815!4.16e-08!2;CL:0000792!4.16e-08!2;CL:0002677!4.16e-08!2;CL:0000893!8.05e-08!2;CL:0002489!8.05e-08!2;CL:0000809!8.05e-08!2;CL:0000808!8.05e-08!2;CL:0000894!8.05e-08!2;CL:0000806!8.05e-08!2;CL:0000807!8.05e-08!2;CL:0000805!8.05e-08!2;CL:0002425!8.05e-08!2;CL:0000625!1.40e-07!11;CL:0000785!1.88e-07!2;CL:0000955!1.88e-07!2;CL:0000818!1.88e-07!2;CL:0000954!1.88e-07!2;CL:0000816!1.88e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000898;7.19e-23;3!CL:0000895;8.72e-18;1!CL:0000624;6.00e-12;6!CL:0000815;1.44e-09;2!CL:0000792;1.44e-09;2!CL:0002677;1.44e-09;2!CL:0000226;8.62e-07;3!CL:0000842;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,6.44e-23,3;CL:0000810,1.22e-17,1;CL:0000895,1.22e-17,1;CL:0002436,1.22e-17,1;CL:0002427,1.22e-17,1;CL:0002428,1.22e-17,1;CL:0002429,1.22e-17,1;CL:0002433,1.22e-17,1;CL:0002431,1.22e-17,1;CL:0002432,1.22e-17,1;CL:0000624,5.68e-12,6;CL:0000815,1.12e-09,2;CL:0000792,1.12e-09,2;CL:0002677,1.12e-09,2;CL:0000893,1.71e-09,2;CL:0002489,1.71e-09,2;CL:0000809,1.71e-09,2;CL:0000808,1.71e-09,2;CL:0000894,1.71e-09,2;CL:0000806,1.71e-09,2;CL:0000807,1.71e-09,2;CL:0000805,1.71e-09,2;CL:0002425,1.71e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002427;8.72e-18;1!CL:0002425;1.44e-09;2!UBERON:0006965;1.44e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.37e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.72e-18;1!DOID:0070004;8.72e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,6.23e-18,1;DOID:0070004,6.23e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.69e-17!7;UBERON:0002370!7.37e-15!4;UBERON:0005058!7.37e-15!4;UBERON:0009113!7.37e-15!4;UBERON:0003295!7.37e-15!4;UBERON:0005562!7.37e-15!4;UBERON:0003351!6.57e-10!6;UBERON:0003408!8.07e-09!10;UBERON:0001042!8.21e-09!10;UBERON:0009145!8.21e-09!10;UBERON:0000974!1.16e-08!10;UBERON:0006562!5.64e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.11e-34;2!UBERON:0005058;1.11e-34;2!UBERON:0009113;1.11e-34;2!UBERON:0004177;1.61e-14;5!UBERON:0005057;1.61e-14;5!UBERON:0002390;2.13e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.61e-38,4;UBERON:0005058,4.61e-38,4;UBERON:0009113,4.61e-38,4;UBERON:0003295,4.61e-38,4;UBERON:0005562,4.61e-38,4;UBERON:0003351,1.19e-25,6;UBERON:0004177,4.28e-22,7;UBERON:0005057,4.28e-22,7;UBERON:0000974,1.11e-15,10;UBERON:0003408,1.11e-15,10;UBERON:0001042,1.11e-15,10;UBERON:0009145,1.11e-15,10;UBERON:0006562,2.57e-14,11;UBERON:0009722,2.57e-14,11;UBERON:0007690,2.57e-14,11;UBERON:0008814,5.53e-09,18;UBERON:0001557,1.53e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0.387336002901508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0.393419540227666,0,0.411202997999018,0.83593247695339,0.32592226663359,0,0,0.668462741311041,1.76763544484902,1.10766947291811,1.35401931882508,0.768547918354051,0.780356085359269,0,0,0,0.444859689486181,0,0,0.113309342697566,1.14966148080576,0.34362744548263,1.51811815211702,0,0,0,0.150575119077773,0.511946444617674,0,0,0.821127996921047,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0,0,0,0,0,0.28853842595289,0.640276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313265848516366,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7785046870815,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,7.3631357213047,8.87668414430768,0,0,0,0,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p8@CEP128 | |||
}} |
Latest revision as of 08:03, 16 September 2015
Short description: | p8@CEP128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CEP128_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -37bp_to_ENST00000554368_5end |
EntrezGene: | CEP128 |
HGNC: | 20359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 6.44e-23 | 3 |
CD4-positive, alpha-beta thymocyte | 1.22e-17 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.22e-17 | 1 |
mature CD4 single-positive thymocyte | 1.22e-17 | 1 |
resting double-positive thymocyte | 1.22e-17 | 1 |
double-positive blast | 1.22e-17 | 1 |
CD69-positive double-positive thymocyte | 1.22e-17 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.22e-17 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.22e-17 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.22e-17 | 1 |
CD4-positive, alpha-beta T cell | 5.68e-12 | 6 |
regulatory T cell | 1.12e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.12e-09 | 2 |
naive regulatory T cell | 1.12e-09 | 2 |
thymocyte | 1.71e-09 | 2 |
double negative thymocyte | 1.71e-09 | 2 |
double-positive, alpha-beta thymocyte | 1.71e-09 | 2 |
DN4 thymocyte | 1.71e-09 | 2 |
DN1 thymic pro-T cell | 1.71e-09 | 2 |
DN2 thymocyte | 1.71e-09 | 2 |
DN3 thymocyte | 1.71e-09 | 2 |
immature single positive thymocyte | 1.71e-09 | 2 |
early T lineage precursor | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.61e-38 | 4 |
hemolymphoid system gland | 4.61e-38 | 4 |
thymic region | 4.61e-38 | 4 |
pharyngeal gland | 4.61e-38 | 4 |
thymus primordium | 4.61e-38 | 4 |
pharyngeal epithelium | 1.19e-25 | 6 |
hemopoietic organ | 4.28e-22 | 7 |
immune organ | 4.28e-22 | 7 |
neck | 1.11e-15 | 10 |
gland of gut | 1.11e-15 | 10 |
chordate pharynx | 1.11e-15 | 10 |
pharyngeal region of foregut | 1.11e-15 | 10 |
pharynx | 2.57e-14 | 11 |
entire pharyngeal arch endoderm | 2.57e-14 | 11 |
early pharyngeal endoderm | 2.57e-14 | 11 |
pharyngeal arch system | 5.53e-09 | 18 |
upper respiratory tract | 1.53e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 6.23e-18 | 1 |
myeloma | 6.23e-18 | 1 |