FFCP PHASE1:Hg19::chr14:94857004..94857018,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8941 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557492_5end | |||
|cluster_id=chr14:94857004..94857018,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_SERPINA1_5end | |||
|id=chr14:94857004..94857018,- | |||
|ontology_enrichment_celltype=CL:0000766!2.31e-31!76;CL:0002194!5.87e-30!63;CL:0000576!5.87e-30!63;CL:0000040!5.87e-30!63;CL:0000559!5.87e-30!63;CL:0002057!1.44e-29!42;CL:0002009!4.58e-29!65;CL:0000738!5.49e-26!140;CL:0000860!1.18e-25!45;CL:0000557!4.51e-25!71;CL:0000839!4.66e-24!70;CL:0002087!1.55e-23!119;CL:0000763!4.73e-20!112;CL:0000049!4.73e-20!112;CL:0000037!2.48e-19!172;CL:0000566!2.48e-19!172;CL:0002031!1.92e-18!124;CL:0002032!4.92e-18!165;CL:0000837!4.92e-18!165;CL:0000988!5.75e-16!182;CL:0002393!1.50e-07!9;CL:0002397!1.50e-07!9;CL:0000094!3.59e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-25;33!CL:0002057;1.74e-25;33!CL:0000473;6.68e-25;39!CL:0000234;6.68e-25;39!CL:0000576;7.01e-23;48!CL:0000766;8.46e-18;69!CL:0002087;4.27e-09;104!CL:0000763;8.67e-09;100!CL:0000094;2.45e-08;8!CL:0000738;5.17e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.38e-42,72;CL:0002194,9.49e-41,59;CL:0000576,9.49e-41,59;CL:0000040,9.49e-41,59;CL:0000559,9.49e-41,59;CL:0002009,1.01e-39,61;CL:0000473,1.21e-39,48;CL:0000234,1.21e-39,48;CL:0000860,2.28e-35,42;CL:0002057,2.28e-35,42;CL:0000557,1.72e-34,67;CL:0000839,2.00e-33,66;CL:0000738,4.84e-32,136;CL:0002087,4.91e-29,115;CL:0000763,7.40e-28,108;CL:0000049,7.40e-28,108;CL:0000037,1.30e-24,168;CL:0002031,7.65e-24,120;CL:0002032,3.60e-23,161;CL:0000837,3.60e-23,161;CL:0000988,8.82e-22,177;CL:0002393,8.68e-09,9;CL:0002397,8.68e-09,9;CL:0000094,2.48e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-25;42!CL:0000049;8.26e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.00e-27!115;UBERON:0002390!3.17e-26!102;UBERON:0003061!3.17e-26!102;UBERON:0002193!1.18e-22!112;UBERON:0002371!8.80e-21!80;UBERON:0002405!3.85e-20!115;UBERON:0001474!4.43e-18!86;UBERON:0004765!3.39e-14!101;UBERON:0001434!3.39e-14!101;UBERON:0000062!1.37e-09!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.55e-07;114!UBERON:0000178;4.38e-07;15!UBERON:0000179;4.38e-07;15!UBERON:0000463;4.38e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.23e-35,98;UBERON:0003061,4.23e-35,98;UBERON:0002193,5.75e-31,108;UBERON:0007023,5.18e-29,114;UBERON:0002371,5.11e-28,76;UBERON:0002405,8.02e-25,93;UBERON:0001474,5.51e-24,82;UBERON:0004765,7.27e-21,90;UBERON:0001434,9.15e-17,100;UBERON:0003081,3.81e-09,203;UBERON:0000178,4.47e-07,15;UBERON:0000179,4.47e-07,15;UBERON:0000463,4.47e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.09340350391728,0.218441372130172,1.05506791291381,0.37129905888014,0,4.70627602516243,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,1.29902789771517,1.14940825229924,0.629686250509434,330.425992553079,148.541977063621,301.891440466348,0,0.6024118375565,0,0,0,0.293600439334847,164.536636333968,179.888369380717,197.913914092857,49.0374888585434,39.5150272543155,54.6060203384475,147.288415883699,241.08485207346,285.036271895684,220.575156023495,256.979930013641,329.837285003285,220.372372518767,338.132132618413,346.682949016666,239.253502431213,249.157087863357,274.915767786514,180.900888300443,222.96432459726,242.926086685136,256.192217914445,342.752200917268,343.324036554085,230.236207530328,328.915571418071,385.307174481556,481.457126884821,571.924306488669,608.497337268677,194.466466908719,284.20819053901,355.972516471686,437.703840403926,532.529461638019,504.124583193329,390.188513818156,352.923137941972,409.672993323366,304.747576300441,218.35720219155,465.622024661441,415.833593118482,526.333527868792,662.157557396798,0,6.55366333514558,1.77901850772711,7.68114400619713,2.00197993518006,2.29900975981793,7.93253847341835,0.954053754535364,0,6.45960908308033,2.6759125968766,1.32171328579026,25.2228853341691,0.790152254325231,0.393419540227666,0.786021525498329,1.85041349099558,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0,2.54852331459277,0,0,17.7678640511772,7.80718328041952,11.2437653897111,19.4157346676094,3.28451198768419,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0.351339142772504,22.0699742213646,0,0,13.306443139842,17.4129737299267,34.0372378928295,8.10868122638163,6.29194401858141,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,848.665888288247,950.061647163397,2.61656431285521,0,0,0,0.286836620748814,3.54668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.57978255948989,2.18196896472668,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,1.40241773803446,1.6462960453256,0,79.8556719377534,88.4544495009863,112.250082269467,0,1.35287282397425,0.343135620597051,0.439001141634502,1.1240175325762,0.100528972411631,0.925884451585296,0,0,0,0,0.234817388471643,0,0,0,6.3216351836742,6.00940313466411,162.010790005507,204.051719201415,250.14624613193,0.93733833986777,2.01578553838631,0.708875486211932,4.83616022595381,2.03443756959773,2.30029607499127,0,0,0,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,1.64648067356154,0,0,0,0.301439377059586,0,0.499864955910285,98.5152623193643,62.2798793375837,40.058448501776,0,0,0,0.144781306667579,0.410952645100767,0,1.2329365839288,5.12279976525011,0.862510299438069,7.7005821767849,0,0,0,0.335032530668698,0,666.616251312992,586.356460039889,965.588146305963,0.36807447515742,1.50051156317903,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,157.350467879517,214.204201412887,79.8322132369764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,1.80455823272956,0.368323955743585,0,0,0,3.60959690325929,0.770153371044148,1.56869953835371,4.38417673959782,1.79437769117889,0,0,0,0,0,1.00337954770971,4.84264918785573,1.66215201785745,2.23874754722178,0,0,1.28225062558195,1.31205858279882,1.95227036798582,51.1083417772702,0,0.41254749960294,1.14853107599234,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.429680979473094,0.290033387828457,0.511359764496605,0,1.4875642382488,3.84380134730212,0.638063562472921,2.2254711788221,0,0,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0.762520775695299,0.511795582622668,0,0.318203247925937,0.78494864019923,0,0,0,0.404364963146632,0,0,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0,1.8589409885985,0,0,0,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0.0962221127255121,2.68120910214315,0,48.2957697984877,0.43050537267123,1.68471475667626,0.886860307073351,0.918893600827838,224.799290889851,188.865390164167,187.413924580299,179.388526919715,253.810522494182,284.03131030241,211.692323397341,184.005040900271,0,0,0,0.743212700502875,0,0,0,3.79200805722352,4.21311814291207,0,28.8913526844354,0,0.456469358066384,3.44695770700651,0,0,0.1605880751037,0.201799707191048,0.425846237690326,26.7934168909497,1.22896305723383,0.671028323677248,1.00109485027145,19.7341976356061,0,0,0,0,0,0,7.03239260505091,0,8.91547074219827,0,0,7.12715233998333,0,0,6.33012373847307,12.4665749625655,145.357017068002,0,4.5827037297746,12.7090601144328,0,0.102268682502155,0.123084805461069,0,6.65025798490219,0.537063524026827,3.5810065915881,4.73488347057281,141.295024484694,0,2.90799823828566,4.54563680993071,0,4.6876996995342,0,7.97499532978273,0.796554137998498,0,0.472775363535873,0,0,0,0.885741385813839,6.39161124714662,0,1.54810963903714,1.77328571372128,0.658156191461918,0.21787692703798,0.278847488557207,6.15602068030377,0.227884111694002,0,0,0,2.55200927785536,1.28236630762607,5.33034776018635,0,1.09886179476517,0,0,0,0,0,0,7.59593032300897,0,0,0,12.9384051040206,14.1532103205343,31.1625373916149,0,0,0,6.26830536720296,3.21031058919516,1.63985112007737,0,3.52196314077761,0.242780379534093,38.2746870763909,6.04953580243319,0.61214552326098,49.2855321102206,0,0,5.98188485436467,7.28182302926097,6.59259128655173,5.97362148864794,0.284609546029793,20.6625262789577,24.4719231052535,1.56787835863004,0.174118413160805,21.8408335302538,0,0,0,0,2.61870344518732,0,5.42353777873278,0,1.58971689362392,1.51945910294109,3.51992488922645,6.57302326062576,10.6726497369676,1.9980960958213,0.576361668616424,0,1.20116498503375,0,0.869767748958028,4.00679858848552,1.63085047288337,2.61507115780833,0.101998217636322,0,4.80336230967832,14.6488755414433,1.27746588066972,0.429765441419957,0,2.23425921017803,1.14580212005842,1.43574604915363,2.99518500748487,4.72148652950228,13.3902874465124,4.83721001904429,0,6.98975697164723,4.17550866228285,5.02736736125115,5.59449413989735,0.984274815147488,2.11683330164461,3.18091875923721,4.22230558945884,0,0,0,2.4747128070665,0,1.88323625639876,0.335434687599266,15.9975585817372,6.24209598806477,0,0,2.87872795979168,10.0057345692271,13.9039313776741,0,0,0,0.326587360109409,0,0,0,1.13312091520126,109.474518557528,10.6005511129777,3.36135686540031,7.40502569759064,2.39521573038061,0,132.843541234212,21.6941941037539,112.673023054437,96.7523742533304,0,0,5.74507131993164,0.544017803369474,0.7520696820681,0,0.327872630709804,0,0.886068179966986,1.34228891392159,7.01069211956399,2.29363678276028,10.538259896001,9.81123166473859,0,0.874862855734746,0,0.285465333544967,3.99951893486892,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.414706207840855,0.53168342911599,0,1.20206087197775,0,0,0.181848659202559,0.644463342254931,0.464033759878494,0,0,0,0,0,1.34833881285112,0.643324774124777,0.260994291965212,0.226705925512272,1.389134845943,0,1.61179956973339,8.33763907334625,3.72782884283802,5.12398523243055,1.54331230616732,0.337884881306145,0,0,2.43087964941906,4.14775308455192,0.584580926518165,1.72724292407372,8.83253128981559,0.327609848846413,0.491545817507439,0.211312123358627,0,7.78849626767228,2.2387947355906,0,0,0,13.0636224606924,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,1.60573062741149,1.41696576325585,7.98169295285756,1.02558182120378,0,1.59061680667701,1.29180516505481,1.42769420259154,0.392590874004102,0,5.68628655417205,2.07946199070609,0,0,0.795664888465099,5.49035396949578,2.42046082444224,4.68908406739856,0,0.327543835020193,48.4967962791908,1.55336444622308,1.56215619722769,4.96048311602842,1.14148458349032,0,1.09651553371436,0.992422356778588,0,1.40538670403555,0,3.36283722218824,1.82089681270989,2.27662191351298,8.78153464610124,0.460935950223117,3.42976018874837,4.01021424563307,1.51277379194553,5.90969204419841,0.556157009460346,6.59341979944318,2.19961825882403,0,5.47895232305697,31.3095007267001,1.43325506366115,7.79094331525554,0,0,0,0,0,0,0,3.44181887056222,0.118332000730565,0,55.0403165248208,5.26945797651315,0.62041277132864,0.955538938977433,0.223710863595585,4.22046004545545,7.80274719886524,0,1.64260490969995,2.3196288626764,0.485710993059139,0,0,0,0,0,0.150962843566674,37.660989156677,6.55678681511872,9.87666322359198,0.245148321753905,0.235676547101626,4.71140321075869,15.4464128170085,0.8453114551668,0,79.8863302828755,37.9012381284634,0.0999411559249289,0.535661815816973,4.94052820401969,2.32699963398588,2.92134555298607,2.2936464170227,11.8971854015705,0,2.24371917630019,0.436350690340377,15.870805215462,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,10.457460354117,0.535928260312357,4.1458471972939,8.79180464826109,2.77204176471275,0.952257725854961,6.45889098360061,9.24913243008283,0.448527450322454,9.03789647549942,5.65928129083014,2.8303177226605,0.684466602170562,11.0457366943924,29.908159648746,2.32862249582209,1.62806537221949,0,0,0.179650404213174,0,2.68931177202306,2.44137706989443,12.6493787095247,4.6292972525936,17.3106985843746 | |||
|short_description=p3@SERPINA1 | |||
}} |
Latest revision as of 18:19, 16 September 2015
Short description: | p3@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SERPINA1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000557492_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.38e-42 | 72 |
monopoietic cell | 9.49e-41 | 59 |
monocyte | 9.49e-41 | 59 |
monoblast | 9.49e-41 | 59 |
promonocyte | 9.49e-41 | 59 |
macrophage dendritic cell progenitor | 1.01e-39 | 61 |
defensive cell | 1.21e-39 | 48 |
phagocyte | 1.21e-39 | 48 |
classical monocyte | 2.28e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-35 | 42 |
granulocyte monocyte progenitor cell | 1.72e-34 | 67 |
myeloid lineage restricted progenitor cell | 2.00e-33 | 66 |
leukocyte | 4.84e-32 | 136 |
nongranular leukocyte | 4.91e-29 | 115 |
myeloid cell | 7.40e-28 | 108 |
common myeloid progenitor | 7.40e-28 | 108 |
hematopoietic stem cell | 1.30e-24 | 168 |
hematopoietic lineage restricted progenitor cell | 7.65e-24 | 120 |
hematopoietic oligopotent progenitor cell | 3.60e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.60e-23 | 161 |
hematopoietic cell | 8.82e-22 | 177 |
intermediate monocyte | 8.68e-09 | 9 |
CD14-positive, CD16-positive monocyte | 8.68e-09 | 9 |
granulocyte | 2.48e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.23e-35 | 98 |
blood island | 4.23e-35 | 98 |
hemolymphoid system | 5.75e-31 | 108 |
adult organism | 5.18e-29 | 114 |
bone marrow | 5.11e-28 | 76 |
immune system | 8.02e-25 | 93 |
bone element | 5.51e-24 | 82 |
skeletal element | 7.27e-21 | 90 |
skeletal system | 9.15e-17 | 100 |
lateral plate mesoderm | 3.81e-09 | 203 |
blood | 4.47e-07 | 15 |
haemolymphatic fluid | 4.47e-07 | 15 |
organism substance | 4.47e-07 | 15 |