FFCP PHASE1:Hg19::chr18:43268917..43268943,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:43268917..43268943,- | |||
|description=CAGE_peak_at_chr18:43268917..43268943,- | |||
|id=chr18:43268917..43268943,- | |||
|ontology_enrichment_celltype=CL:0000542!3.88e-33!53;CL:0000051!3.88e-33!53;CL:0000838!5.51e-31!52;CL:0000084!2.18e-18!25;CL:0000827!2.18e-18!25;CL:0002087!4.70e-14!119;CL:0000625!2.99e-13!11;CL:0000738!5.11e-13!140;CL:0000791!9.59e-13!18;CL:0000789!9.59e-13!18;CL:0002420!9.59e-13!18;CL:0002419!9.59e-13!18;CL:0000790!9.59e-13!18;CL:0002031!5.16e-11!124;CL:0000623!2.14e-10!3;CL:0000825!2.14e-10!3;CL:0000037!5.18e-10!172;CL:0000566!5.18e-10!172;CL:0000988!8.07e-10!182;CL:0000817!1.75e-09!3;CL:0002032!5.12e-09!165;CL:0000837!5.12e-09!165;CL:0000945!1.10e-08!24;CL:0000826!1.10e-08!24;CL:0000785!4.73e-07!2;CL:0000955!4.73e-07!2;CL:0000818!4.73e-07!2;CL:0000954!4.73e-07!2;CL:0000816!4.73e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.03e-17;1!CL:0002591;1.03e-17;1!CL:0000819;1.03e-17;1!CL:0000623;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,8.72e-18,1;CL:0002591,1.22e-17,1;CL:0000785,1.44e-09,2;CL:0000955,1.44e-09,2;CL:0000818,1.44e-09,2;CL:0000954,1.44e-09,2;CL:0000816,1.44e-09,2;CL:0000542,8.41e-08,53;CL:0000051,8.41e-08,53;CL:0000623,8.15e-07,3;CL:0000825,8.15e-07,3;CL:0000817,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.57e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.60e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.03e-17;1!DOID:8675;1.03e-17;1!DOID:12603;1.03e-17;1!DOID:0060058;1.44e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.72e-18,1;DOID:8675,8.72e-18,1;DOID:12603,1.03e-17,1;DOID:0060058,1.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.07e-11!7;UBERON:0003351!2.81e-09!6;UBERON:0002370!2.80e-08!4;UBERON:0005058!2.80e-08!4;UBERON:0009113!2.80e-08!4;UBERON:0003295!2.80e-08!4;UBERON:0005562!2.80e-08!4;UBERON:0001042!5.26e-08!10;UBERON:0009145!5.26e-08!10;UBERON:0006562!3.09e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.43e-34;2!UBERON:0005058;1.43e-34;2!UBERON:0009113;1.43e-34;2!UBERON:0004177;1.78e-14;5!UBERON:0005057;1.78e-14;5!UBERON:0000078;1.57e-09;2!UBERON:0002012;1.57e-09;2!UBERON:0008886;1.57e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003351,1.30e-25,6;UBERON:0002370,7.39e-18,4;UBERON:0005058,7.39e-18,4;UBERON:0009113,7.39e-18,4;UBERON:0003295,7.39e-18,4;UBERON:0005562,7.39e-18,4;UBERON:0001042,1.17e-15,10;UBERON:0009145,1.17e-15,10;UBERON:0006562,2.69e-14,11;UBERON:0009722,2.69e-14,11;UBERON:0007690,2.69e-14,11;UBERON:0004177,1.27e-10,7;UBERON:0005057,1.27e-10,7;UBERON:0000078,1.71e-09,2;UBERON:0007497,1.71e-09,2;UBERON:0003643,1.71e-09,2;UBERON:0003504,1.71e-09,2;UBERON:0003469,1.71e-09,2;UBERON:0003496,1.71e-09,2;UBERON:0002012,1.71e-09,2;UBERON:0008886,1.71e-09,2;UBERON:0007303,1.71e-09,2;UBERON:0002061,1.71e-09,2;UBERON:0005432,1.71e-09,2;UBERON:0004363,1.71e-09,2;UBERON:0008814,5.68e-09,18;UBERON:0001557,1.57e-08,19;UBERON:0000974,1.05e-07,10;UBERON:0003408,1.05e-07,10;UBERON:0004145,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.534893840235659,0,0.236132343941038,0.393364276848904,0,0,0,0,0,0.542270404062111,0.568676929949686,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0.334372990781356,0.651844533267181,4.2610302516126,1.94826728407911,0,0,0.221533894583621,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.639933055772092,0,0.473554504088034,0,0.403213486449465,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.788123040807709,1.94064817373566,0.385029108839245,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,1.48642540100575,0.144269212976445,0.924843963529383,0.159426272728822,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,1.64209310294099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71499041802845,3.35203457197633,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr18:43268917..43268943,- | |||
}} |
Latest revision as of 00:58, 26 July 2015
Short description: | p@chr18:43268917..43268943, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:43268917..43268943, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 8.72e-18 | 1 |
smooth muscle cell of the pulmonary artery | 1.22e-17 | 1 |
mature B cell | 1.44e-09 | 2 |
pre-B-II cell | 1.44e-09 | 2 |
transitional stage B cell | 1.44e-09 | 2 |
small pre-B-II cell | 1.44e-09 | 2 |
immature B cell | 1.44e-09 | 2 |
lymphocyte | 8.41e-08 | 53 |
common lymphoid progenitor | 8.41e-08 | 53 |
natural killer cell | 8.15e-07 | 3 |
pro-NK cell | 8.15e-07 | 3 |
precursor B cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pharyngeal epithelium | 1.30e-25 | 6 |
thymus | 7.39e-18 | 4 |
hemolymphoid system gland | 7.39e-18 | 4 |
thymic region | 7.39e-18 | 4 |
pharyngeal gland | 7.39e-18 | 4 |
thymus primordium | 7.39e-18 | 4 |
chordate pharynx | 1.17e-15 | 10 |
pharyngeal region of foregut | 1.17e-15 | 10 |
pharynx | 2.69e-14 | 11 |
entire pharyngeal arch endoderm | 2.69e-14 | 11 |
early pharyngeal endoderm | 2.69e-14 | 11 |
hemopoietic organ | 1.27e-10 | 7 |
immune organ | 1.27e-10 | 7 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.71e-09 | 2 |
developing epithelial placode | 1.71e-09 | 2 |
respiratory system arterial blood vessel | 1.71e-09 | 2 |
respiratory system blood vessel | 1.71e-09 | 2 |
respiratory system artery | 1.71e-09 | 2 |
head blood vessel | 1.71e-09 | 2 |
pulmonary artery | 1.71e-09 | 2 |
pulmonary vascular system | 1.71e-09 | 2 |
pharyngeal vasculature | 1.71e-09 | 2 |
truncus arteriosus | 1.71e-09 | 2 |
aortic sac | 1.71e-09 | 2 |
pharyngeal arch artery | 1.71e-09 | 2 |
pharyngeal arch system | 5.68e-09 | 18 |
upper respiratory tract | 1.57e-08 | 19 |
neck | 1.05e-07 | 10 |
gland of gut | 1.05e-07 | 10 |
outflow tract | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.72e-18 | 1 |
lymphosarcoma | 8.72e-18 | 1 |
acute leukemia | 1.03e-17 | 1 |
lymphoma | 1.37e-07 | 10 |