FFCP PHASE1:Hg19::chr19:47991535..47991563,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:47991535..47991563,- | |||
|description=CAGE_peak_at_chr19:47991535..47991563,- | |||
|id=chr19:47991535..47991563,- | |||
|ontology_enrichment_celltype=CL:0002057!1.13e-10!42;CL:0000860!6.31e-10!45;CL:0000839!6.42e-09!70;CL:0000766!2.38e-08!76;CL:0000557!3.15e-08!71;CL:0002194!5.74e-08!63;CL:0000576!5.74e-08!63;CL:0000040!5.74e-08!63;CL:0000559!5.74e-08!63;CL:0002009!5.89e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.91e-19;33!CL:0002057;3.91e-19;33!CL:0000473;8.61e-13;39!CL:0000234;8.61e-13;39!CL:0000576;2.38e-11;48!CL:0000766;1.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-18,42;CL:0002057,1.14e-18,42;CL:0000473,1.32e-15,48;CL:0000234,1.32e-15,48;CL:0002009,5.51e-15,61;CL:0000557,2.60e-14,67;CL:0000766,2.70e-14,72;CL:0002194,3.44e-14,59;CL:0000576,3.44e-14,59;CL:0000040,3.44e-14,59;CL:0000559,3.44e-14,59;CL:0000839,3.05e-13,66;CL:0000763,3.40e-08,108;CL:0000049,3.40e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.47e-09;3!DOID:127;8.47e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.46e-09,3;DOID:127,8.46e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.34e-12,76;UBERON:0001474,1.55e-10,82;UBERON:0002390,1.65e-10,98;UBERON:0003061,1.65e-10,98;UBERON:0002405,1.75e-09,93;UBERON:0000926,4.52e-09,315;UBERON:0004120,4.52e-09,315;UBERON:0006603,4.52e-09,315;UBERON:0004765,4.67e-09,90;UBERON:0002193,6.62e-09,108;UBERON:0003081,1.38e-08,203;UBERON:0001434,2.21e-08,100 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.563817616383885,1.0007329835313,0.446961094427288,0,7.59899634504932,2.52687949370732,0.261185628199839,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0,0,0.123121058076788,0.612002073732759,0.626909442956176,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.464448369948228,0,0,0.739508020333575,0.154934401160603,0.142169232487422,0,0.553995408531877,0.200544447470142,0,2.91090116511902,1.29557466407592,0.77272670290256,1.74477886535478,1.13362783106643,0.970336244751265,0.232429036905685,1.23350366406548,0.309706370895104,0.863077176966451,1.7931249457037,2.36482229888585,0.689491361473237,1.29096936716765,0,1.50593871634084,0.272906150057846,1.34834090667051,1.22433556948361,2.24650318953266,1.27867425159808,1.64925650093358,0.797854630486527,0.852449501065388,1.45104619314292,0,1.24564449799115,1.7587406567972,1.5644487552606,1.73751075764093,2.42159801053347,1.84138817993782,1.58231193720442,0,1.06302149982522,0.209658645508376,0.673971786878971,0.150176892841506,0.16072558669708,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0.657751618414705,0.276350017785848,0,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0.451725357233318,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0.973269740605272,0,0,0.263504357079378,0.458426764241994,0.364295288292542,0,0.324547393654683,0.348259474598534,0.398873881556595,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.732186172644509,0,0.81014194788176,0.17859945656816,0,0,0,0,0.549605231791222,0,0,0,0,1.2663051166458,0,0.286836620748814,0.354668382198357,1.68203280042692,0,0.74000264525148,0.622422070799533,0.538842688278752,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0.323745888736263,0.280901613404497,0,0.122834317311768,0.619954687054593,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0,0.554128230968366,0.438977620880838,0.919463387397059,1.35214253015937,0.113432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.969876340912871,0,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.829288440122964,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.330881918197182,0.871517776369625,0.237270619111097,0.404493924480493,0,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0,0,0.491953754172454,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0.704387472105808,0.621984346622316,0.576479813667846,1.00993946741104,0.253991577168676,0.763976851116555,2.34434894420094,0,0.822619941626588,0.600686115687835,2.5724378936752,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0.791951872933429,0,0.871533458600294,0.599837947092342,0,0.502257091432126,0,0.718874566474748,3.44585807502342,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.394061520403854,0.431255149719035,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0,1.49801404789436,8.97484377612075,0.828831026872071,0,0,0.271265023699736,0.207970861530807,0.892144943985809,0,0.234282829985426,0.902838299183157,2.27407504055985,0,0,0,1.04260337361699,0.979005787313703,0.686286847621712,0.206768026122887,0.215714200818617,0.533637789017222,0.303127571446259,0,0,0,0.153461973288062,1.12264037773229,0.768834895534206,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,1.06537035187876,0.0821271560138091,2.59627214591811,0.464841513839837,0.604297247958111,2.6065841139427,0.368323955743585,1.03333003348146,0.364182336013434,2.49136388422906,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0.680374821106063,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0.784306353074702,0,0.328014645699706,0.325378394664303,0.721287081534056,0.27470839445503,0,1.14853107599234,0,0,0.193341436584244,0,0.460511024178389,0.275673144969061,0.214840489736547,0,0.170453254832202,0.534192213880424,1.15699440752685,0.576570202095319,0,0.50578890427775,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0.9266210955196,0.143124886741991,0,0.632758849437452,0.38126038784765,0,0,0,0.78494864019923,0.539617372749944,0.823611089208164,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.272999822815972,0.565621727814851,1.13008116620243,0.551365343546124,0.66343897524122,1.75380354101505,0.578775534266688,0,0.202910376962704,0.6196469961995,0,0.286822704408103,0.196498082026242,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0.459446800413919,1.01489521846434,0.764637207142375,0,0.238231775457789,0,0,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.142283686696828,0.159426272728822,0.798317485731266,0,0.635020748171649,0,0,0,0.47003968731907,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,1.61158997199083,0,0,0.284136146806413,0,0.593929361665277,0,0,0.422008249231538,0.222617410045812,0,0,0.597743964753209,0.276283915531148,0.503865495708552,0,0,0.622079175323615,0,0,0,0.887790650732402,2.3948309234694,0,0,1.11321717794222,0,0,0.0874599999961957,2.89999830173917,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0.520874984799877,0.885741385813839,0.120596438625408,0,0.884634079449797,0.591095237907095,1.09692698576986,0,0.278847488557207,1.00035336054936,0.113942055847001,0,0.179515288819544,0,0,0.457987967009312,0,0,0.627921025580099,0,0,0.19606253431774,0,0,0.158936578980379,0,0.163232808159148,0,0.216388639742091,0,0.176915129006678,0,0,0.370691816839509,0,0.269604531922708,0,0.937057782901357,0.182454789215666,0,0,0.789168805698781,0,0,0.252746318513952,1.05226393590145,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.0870592065804026,2.79562669187248,0.51595809741485,0.0967563312890851,0.0730893170861856,0.246346371159628,0.581934098930517,0.176512253383001,0,0.274083849293502,0.19871461170299,0.379864775735272,0.195551382734803,0,1.49417096317547,0.39961921916426,0.432271251462318,0,0.343189995723929,0.14405479798815,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0.525774708558629,0.279282401272254,0.229160424011684,0,0.399358000997982,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0.164831716762333,0,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.275078873194468,0.83088067605837,0,1.5476039091159,0.121499113316049,0,0.236417121897595,0.367182116944987,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,3.25799761052228,3.45688596480507,3.26587360109409,0,0,0.340776043570843,0,3.22414914091781,2.65013777824443,0.258565912723101,0.13223260174269,0.171086837884329,0,0.533937062838473,0,1.24271716604159,0,0,0.243585196761792,0,1.08803560673895,1.0027595760908,0.306345576763462,0.655745261419609,0,0.886068179966986,1.70836770862748,0.1251909307065,0.573409195690071,0.332787154610557,0.18628920882415,0.276697269872462,0,0.758245587708239,0.285465333544967,0.235265819698172,0.468334905806882,0.28984205722165,0.447764408660622,0,0.554805861502613,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0.909243296012797,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.463044948647668,0.97894681802587,0.358177682162975,0,1.09642024789354,0.176689145945881,0,0.168942440653073,0.256241518587947,0.690860683462397,0.911579868532147,0.414775308455192,0.194860308839388,0.265729680626726,0.654261577023377,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0.218419276384028,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0.6124909547064,0.321146125482298,1.41696576325585,0.319267718114302,1.8460472781668,1.00828678488687,0.207471757392654,0.645902582527404,0,0.196295437002051,0,0.183428598521679,0.231051332300676,0.381382095467167,0,0.198916222116275,1.12815492523886,0,1.56302802246618,0.523813388962845,0.49131575253029,0,0.202612753855184,0.781078098613847,0.206686796501184,0.253663240775627,0,0.548257766857182,1.48863353516788,0.351742488719241,0.255524855279191,0.535701835878287,0,0,0.455324382702595,0.354809480650555,0.115233987555779,0,0.543757863814654,0.394636641377094,0,0,0.313972371402056,0,0,0.913158720509496,0.215927591218621,0,0.500335809236594,0,0,0,0,1.03608082081518,1.19502933965765,0.691259661814092,0.430227358820278,0.473328002922261,0.0852134047591577,2.11693525095465,0.22910686854405,0,0,0.447421727191169,0.196300467230486,0,0,1.33461648913121,0,0.485710993059139,0.233939463462106,0.397901550322736,0,0,0.109940516745429,0,0.771741581079447,0.218559560503957,0.470317296361523,0.245148321753905,0.235676547101626,0.392616934229891,0,0,0,0.845855261818682,0.128915775947154,0.0999411559249289,0,0,0.160482733378337,0,0,0,0.157771562193185,0.543931921527318,0.436350690340377,0.5290268405154,0.743990036333503,0,0.432626562123789,0,0.109265571963696,0,0,0,0.0918948995348449,0.250707539292375,4.24360710022141,0.803892390468535,0,0.310298987585686,0.426467963801962,0,1.35636710655613,0.744896571550295,0.112131862580613,0.445530107947154,0.202117188958219,0.870866991587845,0.342233301085281,0.134704106029175,0.215166616178029,0,0,0.213454691755431,0,0.179650404213174,0,0.122241444182866,0,1.33151354837103,0.603821380773079,0 | |||
|short_description=p@chr19:47991535..47991563,- | |||
}} |
Latest revision as of 15:32, 27 July 2015
Short description: | p@chr19:47991535..47991563, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47991535..47991563, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-18 | 42 |
defensive cell | 1.32e-15 | 48 |
phagocyte | 1.32e-15 | 48 |
macrophage dendritic cell progenitor | 5.51e-15 | 61 |
granulocyte monocyte progenitor cell | 2.60e-14 | 67 |
myeloid leukocyte | 2.70e-14 | 72 |
monopoietic cell | 3.44e-14 | 59 |
monocyte | 3.44e-14 | 59 |
monoblast | 3.44e-14 | 59 |
promonocyte | 3.44e-14 | 59 |
myeloid lineage restricted progenitor cell | 3.05e-13 | 66 |
myeloid cell | 3.40e-08 | 108 |
common myeloid progenitor | 3.40e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.34e-12 | 76 |
bone element | 1.55e-10 | 82 |
hematopoietic system | 1.65e-10 | 98 |
blood island | 1.65e-10 | 98 |
immune system | 1.75e-09 | 93 |
mesoderm | 4.52e-09 | 315 |
mesoderm-derived structure | 4.52e-09 | 315 |
presumptive mesoderm | 4.52e-09 | 315 |
skeletal element | 4.67e-09 | 90 |
hemolymphoid system | 6.62e-09 | 108 |
lateral plate mesoderm | 1.38e-08 | 203 |
skeletal system | 2.21e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.46e-09 | 3 |
leiomyoma | 8.46e-09 | 3 |