FFCP PHASE1:Hg19::chr8:87755949..87755968,-: Difference between revisions
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|id=chr8:87755949..87755968,-
|short_description=p3@CNGB3
|description=CAGE_peak_3_at_CNGB3_5end
|association_with_transcript=-46bp_to_ENST00000320005,NM_019098_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54714 | |EntrezGene=54714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2153 | |HGNC=2153 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQW8 | |UniProt=Q9NQW8 | ||
|association_with_transcript=-46bp_to_ENST00000320005,NM_019098_5end | |||
|cluster_id=chr8:87755949..87755968,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_CNGB3_5end | |||
|id=chr8:87755949..87755968,- | |||
|ontology_enrichment_celltype=CL:0002586!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0003056,4.28e-08,61;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p3@CNGB3 | |||
}} | }} |
Latest revision as of 08:45, 19 September 2015
Short description: | p3@CNGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNGB3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -46bp_to_ENST00000320005, NM_019098_5end |
EntrezGene: | CNGB3 |
HGNC: | 2153 |
UniProt: | Q9NQW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
pre-chordal neural plate | 4.28e-08 | 61 |
endocrine gland | 9.98e-07 | 35 |