FFCP PHASE1:Hg19::chr1:156265438..156265485,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112770 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29436 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WWB7 | |||
|association_with_transcript=0bp_to_ENST00000362007,ENST00000368264,ENST00000472870,ENST00000476177,ENST00000484214,NM_144580,uc001fog.1,uc001foh.2,uc001foi.2,uc001foj.2,uc009wrx.2_5end | |||
|cluster_id=chr1:156265438..156265485,- | |||
|description=CAGE_peak_1_at_C1orf85_5end | |||
|id=chr1:156265438..156265485,- | |||
|ontology_enrichment_celltype=CL:0000548!2.08e-24!679;CL:0000004!2.08e-24!679;CL:0000255!2.08e-24!679;CL:0000012!3.13e-23!682;CL:0000055!8.39e-22!180;CL:0000222!8.73e-21!119;CL:0000144!5.51e-20!625;CL:0000220!1.91e-17!246;CL:0002321!3.03e-17!248;CL:0002371!3.93e-17!591;CL:0000003!6.74e-15!722;CL:0000066!3.86e-12!254;CL:0000183!1.72e-11!59;CL:0000213!3.02e-11!57;CL:0000215!3.02e-11!57;CL:0002078!9.80e-11!44;CL:0000115!1.15e-10!35;CL:0000680!2.72e-10!57;CL:0000056!2.72e-10!57;CL:0000355!2.72e-10!57;CL:0000192!3.92e-10!42;CL:0000514!3.92e-10!42;CL:0000057!1.07e-09!75;CL:0000187!2.31e-09!54;CL:0000063!4.35e-09!578;CL:0000393!5.58e-08!60;CL:0000211!5.58e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.05e-09;36!CL:0002078;2.18e-08;45!CL:0000134;5.60e-08;55!CL:0000192;1.43e-07;43!CL:0000048;6.13e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.26e-21,121;CL:0002321,9.27e-18,250;CL:0000066,5.67e-12,253;CL:0000213,1.33e-11,58;CL:0000215,1.33e-11,58;CL:0002078,4.22e-11,45;CL:0000115,4.68e-11,36;CL:0000680,1.81e-10,58;CL:0000056,1.81e-10,58;CL:0000355,1.81e-10,58;CL:0000192,2.63e-10,43;CL:0000514,2.63e-10,43;CL:0000057,1.17e-09,76;CL:0000187,1.54e-09,55;CL:0000393,3.77e-08,61;CL:0000211,3.77e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.43e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.03e-13!448;UBERON:0004120!2.03e-13!448;UBERON:0006603!2.03e-13!448;UBERON:0002049!1.32e-12!79;UBERON:0007798!1.32e-12!79;UBERON:0003914!2.49e-12!118;UBERON:0005256!1.32e-11!143;UBERON:0000055!1.62e-10!69;UBERON:0000486!3.08e-10!82;UBERON:0000490!4.48e-10!138;UBERON:0004872!1.13e-09!84;UBERON:0000468!1.20e-09!659;UBERON:0002100!1.92e-09!216;UBERON:0000914!6.01e-09!83;UBERON:0002329!6.01e-09!83;UBERON:0003077!6.01e-09!83;UBERON:0003059!6.01e-09!83;UBERON:0007282!6.01e-09!83;UBERON:0009618!6.01e-09!83;UBERON:0007285!6.01e-09!83;UBERON:0004290!8.20e-09!70;UBERON:0001134!3.14e-08!61;UBERON:0002036!3.14e-08!61;UBERON:0003082!3.14e-08!61;UBERON:0003104!5.49e-08!238;UBERON:0009142!5.49e-08!238;UBERON:0004535!8.11e-08!110;UBERON:0002385!8.84e-08!63;UBERON:0001015!8.84e-08!63;UBERON:0000383!8.84e-08!63;UBERON:0001981!1.18e-07!60;UBERON:0007500!1.18e-07!60;UBERON:0004537!1.18e-07!60;UBERON:0006965!1.18e-07!60;UBERON:0001637!2.03e-07!42;UBERON:0003509!2.03e-07!42;UBERON:0004572!2.03e-07!42;UBERON:0001009!3.62e-07!113;UBERON:0000480!6.93e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.13e-12,78;UBERON:0007798,1.13e-12,78;UBERON:0003914,3.75e-12,117;UBERON:0007503,2.65e-11,78;UBERON:0000490,5.87e-11,148;UBERON:0000926,7.06e-11,315;UBERON:0004120,7.06e-11,315;UBERON:0006603,7.06e-11,315;UBERON:0000055,1.41e-10,68;UBERON:0000486,2.06e-10,83;UBERON:0003104,2.29e-10,160;UBERON:0009142,2.29e-10,160;UBERON:0004872,1.04e-09,83;UBERON:0005256,1.42e-09,122;UBERON:0002100,2.70e-09,199;UBERON:0002329,5.53e-09,71;UBERON:0003059,5.53e-09,71;UBERON:0007282,5.53e-09,71;UBERON:0004290,5.53e-09,71;UBERON:0009618,5.53e-09,71;UBERON:0007524,1.05e-08,73;UBERON:0003077,1.54e-08,72;UBERON:0007285,1.54e-08,72;UBERON:0001134,2.11e-08,62;UBERON:0002036,2.11e-08,62;UBERON:0003082,2.11e-08,62;UBERON:0002385,5.99e-08,64;UBERON:0001015,5.99e-08,64;UBERON:0000383,5.99e-08,64;UBERON:0004535,7.83e-08,109;UBERON:0007500,1.07e-07,59;UBERON:0001981,1.07e-07,59;UBERON:0004537,1.07e-07,59;UBERON:0006965,1.07e-07,59;UBERON:0001637,2.03e-07,42;UBERON:0003509,2.03e-07,42;UBERON:0004572,2.03e-07,42;UBERON:0001009,3.54e-07,112 | |||
|phase1_expression=190.035584717002,134.883330051319,145.605899431138,158.115811397946,158.671188521687,207.616568735888,182.375912281184,108.655818229415,124.846730279523,79.1263275534859,215.62056090348,114.46327899621,186.747020585745,188.372389205191,150.454408580474,125.05247724003,116.922738436652,130.72550617934,111.736610923026,126.199084528708,131.376445161299,105.320786416638,58.1059053876045,43.2523183230314,43.4377532998018,9.16960868975415,9.44156778674376,10.3898231334057,21.6350352266897,31.8578400420687,28.1765344435258,94.7003861213295,90.6629815522533,65.0767057893546,0,11.3735385989937,25.2496377827969,39.3336740057633,43.3176006535506,37.9769023752741,731.307938867593,683.739528966066,836.863019243472,39.6937191868212,68.7734217513633,60.8885993581419,46.9506654549483,93.3351105809544,60.7024486954403,22.4400066011277,47.6458914144127,25.3035985980786,23.0979606093534,45.8294125344517,31.1480919166986,42.1662840575435,84.6009065179322,57.9786589868318,24.4867113896722,48.7812121155662,29.4095077867559,29.3567657166177,45.6771775953537,30.2619572878213,20.6048559426295,25.5323351111013,24.2900677108274,33.4160724791469,47.4549455762383,33.447082084588,17.5565855763677,34.2498201468435,28.4816148696796,57.4614378768482,69.7342103885343,45.0766087843008,63.6903338600627,56.9170423869309,45.4853410352737,31.9214272990198,33.2190850922481,25.5729815270488,14.0796995569058,14.1996038928154,13.3426388079533,11.0949857867292,6.00593980554019,9.19603903927173,9.25462821898807,7.63243003628291,11.9534723512984,12.3319809767897,8.79228424688026,14.5388461436928,14.0127140745384,23.7045676297569,17.1137499999035,21.6155919512041,18.5041349099558,73.3948714765077,14.340579731878,15.6237775892462,19.4826728407911,90.2424700769906,20.9170194307134,26.3625334554509,24.6431516026164,115.666461712285,112.371276291735,59.6909593711344,63.0078040551734,56.2217986326002,21.9464113479849,19.2629396224593,19.8617495229456,62.0935197982663,19.1610246800961,27.1465681931278,18.7234572094432,20.3881865167422,14.3238359848412,12.3558765778289,23.4897185761326,22.01369711856,27.4847598415161,26.9926067330179,23.8127119107104,14.314078768956,13.1045695933919,12.3100743300379,48.7613732627923,185.784138137907,77.1011247916488,78.0708569150663,85.7287827187371,98.2059398554385,157.466617516118,86.1343720435665,76.9513411715512,82.7050652535364,84.1457246940147,60.9052701064364,99.0883184155715,64.8872774872751,101.907881607571,145.746590119487,138.27627893962,15.9788718284579,18.8758320557442,10.4008100372278,80.4987749835156,104.088386007841,109.002117504785,117.584051920194,148.922299854517,111.697925027667,102.407533603037,176.240229753482,228.757706907555,133.553524493103,171.605289088497,121.643536914962,171.331564398815,94.1217485685424,145.015408670835,85.1919407830121,83.300397244309,84.6838333234583,96.5894816035064,99.6728942546535,95.0817050998814,6.58902087180316,3.87780264148325,105.970854670636,76.0367086093837,94.3397311901119,148.430691691618,291.139170060046,124.133933769425,103.725356026327,76.8592769253876,158.853901180651,159.96247219548,82.7123526507885,97.2598323525079,125.172592662358,75.4790461068798,63.9697508906265,130.170752038244,108.96011791499,111.787613052747,44.2728059886994,38.202014870879,34.9722508688599,86.153060269565,58.9604723096486,98.676121022856,146.124351445693,128.826070154128,225.720017760631,337.031908511816,64.9777399862696,50.7981190680174,72.3137341413717,80.3329046211933,104.818826163265,152.641867849102,81.6711718752151,101.893313071274,72.3959548094944,88.1636708823777,169.251378191603,79.8657101597901,70.3358674324568,102.736504695038,127.426130842156,79.6060332166993,64.6230462064933,83.7654077644924,106.039813273141,191.350170366455,84.027249921852,77.1500695012719,124.266728584,76.9144060066154,88.3358153798132,51.2289565744301,52.0841989503437,64.3714443497132,67.4833468150062,78.9764263240717,48.5419887570854,143.933569743431,236.712665254982,99.457143373786,130.023019848954,237.498349469294,171.663166857813,167.404597247555,161.9594120817,176.360062399098,166.024136398414,165.377621520434,185.662711336546,185.429284543452,173.905714939768,153.536334561927,165.485293088066,156.809698317263,214.632718622891,69.715269152007,53.0726697005918,62.0329402015474,5.73902029239046,111.673502197147,160.415902629121,72.5449386551015,44.9607013030478,39.7089441025942,36.4798473924607,57.3422617346171,148.71067429498,109.691819939208,124.857046158158,128.210294105517,130.074169432728,165.28582798985,107.303341860313,60.0555342449049,50.6506835635975,551.279876629683,249.682550903567,371.132012234954,59.0523154116695,50.3946384596579,49.7630591320777,29.5543124919399,26.7383223432845,49.072982933147,100.010637292877,122.387323278384,43.3315761480214,37.0388280281591,48.855821736009,324.474239832984,574.51059203965,658.762053320464,415.706043835174,339.536380906374,448.111842303125,555.360758601213,98.4510920552267,112.477697758986,80.0120698306565,214.849591589427,1194.57252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| |||
|short_description=p1@C1orf85 | |||
}} |
Latest revision as of 15:35, 17 September 2015
Short description: | p1@C1orf85 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf85_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000362007, ENST00000368264, ENST00000472870, ENST00000476177, ENST00000484214, NM_144580, uc001fog.1, uc001foh.2, uc001foi.2, uc001foj.2, uc009wrx.2_5end |
EntrezGene: | C1orf85 |
HGNC: | 29436 |
UniProt: | Q8WWB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.26e-21 | 121 |
embryonic cell | 9.27e-18 | 250 |
epithelial cell | 5.67e-12 | 253 |
lining cell | 1.33e-11 | 58 |
barrier cell | 1.33e-11 | 58 |
meso-epithelial cell | 4.22e-11 | 45 |
endothelial cell | 4.68e-11 | 36 |
muscle precursor cell | 1.81e-10 | 58 |
myoblast | 1.81e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.81e-10 | 58 |
smooth muscle cell | 2.63e-10 | 43 |
smooth muscle myoblast | 2.63e-10 | 43 |
fibroblast | 1.17e-09 | 76 |
muscle cell | 1.54e-09 | 55 |
electrically responsive cell | 3.77e-08 | 61 |
electrically active cell | 3.77e-08 | 61 |