FFCP PHASE1:Hg19::chr1:193091080..193091222,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16783 | |||
|TSSclassifier=strong | |||
|UniProt=Q6P1J9 | |||
|association_with_transcript=0bp_to_ENST00000367435,NM_024529,uc001gtb.2_5end | |||
|cluster_id=chr1:193091080..193091222,+ | |||
|description=CAGE_peak_1_at_CDC73_5end | |||
|id=chr1:193091080..193091222,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.45e-10!42;CL:0000860!7.61e-10!45;CL:0000763!1.36e-07!112;CL:0000049!1.36e-07!112;CL:0000766!2.31e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.85e-12;33!CL:0002057;3.85e-12;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.45e-10,42;CL:0002057,2.45e-10,42;CL:0000763,1.14e-07,108;CL:0000049,1.14e-07,108;CL:0000766,1.61e-07,72;CL:0000473,8.48e-07,48;CL:0000234,8.48e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;5.65e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-16!115;UBERON:0001049!5.12e-07!57;UBERON:0005068!5.12e-07!57;UBERON:0006241!5.12e-07!57;UBERON:0007135!5.12e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.74e-15,114;UBERON:0001049,1.91e-07,56;UBERON:0005068,1.91e-07,56;UBERON:0006241,1.91e-07,56;UBERON:0007135,1.91e-07,56;UBERON:0001016,5.57e-07,89 | |||
|phase1_expression=24.5265812015251,28.2612691536098,31.7147409215935,23.01685862122,25.4767823823554,22.6808016266096,22.796989035148,26.5322346839269,21.4172215123868,21.8703203486343,10.4670175195864,17.693751142544,12.3970479767373,28.8375602396909,33.8025323242474,33.6162573225888,27.121253761079,20.4486825308465,23.9087071407348,21.0537009311307,17.5440594470058,13.4785530235578,36.6382063527753,32.7129875924193,33.8965126905968,27.5852394750104,26.1079874450827,30.9333370562759,42.4833418996816,51.4331393450265,33.2854665129563,18.3884244895785,16.2651196140255,17.0086844676722,30.5995442292191,30.9928926822579,17.6160263600908,63.155476572634,66.580756560087,48.8274459110667,23.2872093209521,26.2353869475373,29.6211902779315,33.2961966805203,52.1468802290557,44.3928831973704,42.3020847168346,62.0863510912957,69.0645207096081,75.3754067884034,70.7003550020318,77.8026536333445,51.0223607490195,58.7391062061282,55.5248595036801,42.1662840575435,55.1270423116848,55.0572536890457,62.747197936035,88.5764114730018,73.5237694668897,77.1852042436916,60.0385609441112,72.0319828400253,69.6502172708602,90.7816359505824,82.8353591164115,71.1033722676583,66.2283306393656,78.187984093842,79.3073348449713,88.018355001028,88.6094684834476,24.5056132121852,27.4259546954906,26.4169893340554,32.6876316636301,33.9399777821804,54.0037971302189,19.6658793181461,25.2624180042844,31.2355702937524,19.3595868907455,22.9378216730095,22.2377313465889,27.3107342442565,21.2209873129087,23.5648500381338,25.7807500386096,20.0351288452426,30.7375003319102,41.6938404453367,43.1968747781509,19.8256992868539,57.1718734241167,18.9636541038055,47.2103448273199,47.9473130553981,41.5315027979009,31.2638746380568,20.5331027979162,26.0396293154103,27.2757419771076,31.8633906691596,25.336108042836,25.2548639825328,36.2877177445121,25.1058986662323,22.2401484327392,19.8969864570448,19.0681512272235,30.4293240021805,32.6230438956533,26.7540828089713,28.2245914273437,36.9388457194066,23.7596706033191,26.4593133021625,44.278446103413,28.3523218748446,36.4606734159594,20.9099449778642,32.8253759589545,33.1485322889944,31.2326816380865,26.5190522289299,27.9183518953156,44.3534835094411,39.0462685843921,41.2749551065977,99.9608151887243,16.0968206328873,30.0477020332296,19.5177142287666,26.0695713530663,25.2032942991833,43.7407270878105,45.7436778084478,46.7001996790495,37.9157269660984,38.8229752763617,34.0545596294053,8.01449634243593,11.4943177263173,23.3674123431372,24.3781632218974,16.6197450648581,51.7524654742592,65.7794147397147,68.7196377459695,22.261389625071,27.527507043396,22.5641326044936,32.7878606315926,18.8774746294458,20.6338531455051,21.7354765198283,31.2684278594888,42.3361852597185,43.8484002721718,19.7386365383482,23.5684352772739,17.5724681434682,37.5016341952786,9.72170337458112,35.5412918570637,47.1511682514957,45.4950381152622,13.7984973719295,20.8838445104988,24.1826301988138,164.725521795079,193.890132074163,6.97750483428055,32.3031768601957,30.6445838228283,48.4617601776381,45.6070226990614,27.3094654292735,22.9877816058346,13.8773694448616,20.7200740670414,28.3202042213787,30.8487439039586,28.7692949479687,25.7307626996383,31.1134999219199,24.8380717743824,32.4646479903533,26.2417037910447,24.9579296521508,38.9882535497299,36.4214124828296,38.6239718431183,41.0349884222335,29.7259047894478,33.3742273197722,26.1360628602052,31.4029000183767,24.5743567723267,10.0606539854273,30.63717273964,38.9118596801809,49.8715407871529,32.9233215660628,29.4228283967059,33.5030871361711,23.9341906467644,55.4313974278583,37.3725430432493,41.9625164295932,37.2112959144659,40.6026965199449,46.6329377482589,29.5925801567228,36.4556877641135,43.4569043018946,50.9916223973111,36.5438097609928,34.2689640455881,45.08621824961,38.5880536211862,28.8253006927829,35.17347527572,36.0024879179902,47.8963674299636,31.347242475306,37.5059244349803,27.5379644600759,27.2628574690424,39.8666944383493,40.1475094983413,31.2899064659632,32.1620469096443,19.3388889893473,39.4712738827182,24.5439023767659,37.2666420125508,49.73248357304,43.1409743491433,37.1690688108168,42.7043710421116,47.9286650604415,41.3932116051705,42.3838364670748,45.4001645196741,14.0249536378683,16.8290128564135,16.462960453256,20.5812195939759,27.8861076608028,28.5019892836512,37.2197641209285,35.7585110525867,29.271248373261,37.7449182656756,47.5218735819349,24.7283857166763,26.3385907718473,33.7021940377048,15.9646069602059,9.35941306751621,27.4229549848019,35.1269127074483,57.0606253986093,16.8908743880456,20.8343480659475,25.4940563994362,14.223679163267,23.1791263765616,25.6065686330893,21.7623966579491,25.4159287513725,42.1802252940496,46.8670137674818,40.5476778113225,39.0475158984419,34.5854386831615,10.7347150166259,108.385912337108,39.8859406079914,45.4048573034291,50.5861036493535,50.496973370552,21.4622882707531,21.3913518312635,12.8939191931052,13.6857956818164,20.976808511478,22.8260723961377,24.8668996388603,23.9960520499072,20.0541631663309,34.1756411925627,37.8766127170289,3.57656445851882,17.751357803676,35.1038313892029,43.6831235027738,15.1752350814664,14.1849132023278,16.5181750989982,34.0287624906391,13.5655401347861,14.8183260620538,28.9905204021424,31.6298834380866,22.9666043150694,45.2159065589379,36.6044052612123,44.8878730407436,14.5948536769429,19.5880265658529,18.9750545534728,41.934349711027,43.6475356169633,84.1557739740238,48.9360816536418,34.9309748335652,39.7515338392568,22.8653693746796,41.7705211628086,36.0098050015394,33.2408463964548,50.5648302202702,36.4391590801341,27.0651084472193,17.4216915947723,18.5002237979417,136.319278358387,152.572344194053,179.027501804367,38.4024369080908,27.5093786582822,33.0943328913677,15.3898437532797,17.4860409021219,18.6088849740043,27.8796567682657,24.0756879782175,9.09630016223939,11.3820378421755,40.5177615106616,25.6273144272967,28.5847091599993,10.3774613455252,12.3531632571908,39.4926929894715,40.5542697539,38.2084656936331,17.8845267153293,18.3078983461547,12.3980020265169,38.2086024040916,29.0043129514438,29.1886498210397,37.4166315826647,30.7024349440022,33.9401773613012,14.8418066444991,26.5240673340568,18.6439811578783,30.6334291931508,43.0981176222406,23.2420756919918,32.9946297385129,41.50483935278,58.655589952166,32.1480454860899,36.4182336013434,24.2580167674935,9.02399225814824,39.4318525974604,14.1182958451834,10.2297457257282,39.3707575770426,6.8240030442538,20.4112446331819,44.0468468848364,9.25363516141736,10.0250181891226,8.02703638167765,21.1547306627382,17.4525961875032,14.1041095474972,66.87426237701,59.3458473826524,27.4401633874536,17.0567615763847,49.1321375943098,43.792429950282,40.6568423793445,37.7893509636293,31.0103390517933,22.1020483652417,38.5641431625983,33.7380806839506,33.5825985309925,30.0867202463214,31.9780848164111,36.0932022757399,39.5895574385844,34.6872373583531,36.948294793396,48.7590500314885,54.7741691990553,65.0824833722379,63.0212974730076,47.4142460283231,53.5180989612088,18.1229690241756,16.6338133295088,14.9045688488766,36.5371856671531,21.8682578542626,40.6474678347255,33.8664116117297,37.6491515415284,41.1761218875462,13.818480730812,60.7673363008167,17.5011786359265,12.5591782431877,46.5869665140785,40.6314804009361,32.0449734380267,22.6444379362114,17.4361353290309,28.6455750242507,10.2403085208814,42.1624337062122,22.1865308189186,31.5314795352447,37.6138448996876,9.04064932961942,21.5032483982988,21.230047207719,25.868602229972,13.8906128224005,49.8480011555441,28.6103631517413,21.6876448669825,13.5213889215476,32.6977883025237,35.4679038057367,22.1136051918375,32.2832568304244,22.3774093415524,22.0627578283134,9.10735617037716,15.7470624110242,34.2550721302823,14.0763477862515,18.5114674264248,39.634540127024,14.6371826708218,15.1624328100863,10.1988935313435,22.742616620489,38.0585706924127,41.2904091856883,45.0021277867588,35.020070992295,42.370314127878,43.4477118499121,48.6028293514303,36.4837581095364,40.5931470284398,112.610143065813,41.9018769327564,38.0896509007723,20.0534206037258,22.1962551247052,17.8557425456281,46.5019935438463,15.5119349807217,38.7362656384706,29.21597462471,23.5869629615305,18.2587743226554,19.5849869716279,47.6205506471128,31.149687115495,20.2340974630661,24.8213639844989,25.1249280237293,43.6251787839821,32.874761781005,34.6697967233245,38.5421517354509,34.5836928861611,46.7722372144007,83.6994312844444,29.7501246323581,35.3056286077689,50.7553218316258,25.2639729551097,55.0870754062321,57.2821662657703,32.6529115933012,16.7640326615784,31.0367830158997,28.5086093599333,38.0879270603048,46.724939445016,56.4084359806156,31.7229809315282,42.3545956762772,67.3490051928299,38.8533577089586,49.7311047956066,35.7744501953072,44.282339523433,31.3866253925727,34.8364338181224,43.2266769018642,60.3301358656803,16.3703158472599,76.9418563968082,35.922463852041,44.4547960578548,28.1106496367613,38.034920246359,13.9729658600836,69.5342122097573,90.3461799960702,22.4749868384786,33.4552737959369,52.3762519603099,33.0942754475111,51.7115059862197,35.8673674461403,62.5049981759852,57.5731900778995,56.3185368380655,51.8777903478083,90.1220968439481,41.9677618914037,46.9484749909501,43.4664469440771,23.562612783084,65.9463715377541,33.2710803073244,61.5605624716121,32.9410554983864,47.0443120422295,29.6671078550685,32.4255480642593,31.4490517850994,20.4386596391473,37.832241791201,37.0652050637349,66.0995285608339,68.8179495455266,61.5905224201343,53.320798895496,39.2573350081535,32.2827038727881,16.6497464322331,20.2134892150535,20.5569207754987,15.9241908972561,38.5674981234559,29.329446956814,53.3738031625119,16.8046956967244,17.1251997188947,39.9014707245608,42.5366153068358,48.9612691565959,25.3612157009776,85.114109235459,44.428809454739,44.9826219248305,32.6674933331392,46.216987006204,53.3926597860723,56.3712822804347,37.742501668598,74.4412337432047,45.3458979549433,74.0881687441052,76.4623550546937,77.1291869740738,46.039991440362,36.7946645270478,53.1118793985927,37.1742812098319,38.7893203497307,45.2323265400352,31.5425640002418,40.4183923486606,34.8990692476139,41.3173210240667,89.6682247185643,44.7441866745454,22.7489594913607,25.8328995213887,36.530329266542,42.6302014361871,54.8286330520491,45.6789408742214,33.76782401938,34.1494288655231,27.4887830798198,63.3185542110649,49.9870149018879,32.181406711447,47.6101949925927,33.9760515184035,34.9373506683193,29.171490243988,46.8099955640461,43.8306810758146,69.1372163404565,65.1507599141559,36.1002970792764,20.5052136337865,56.6943274582676,68.9772876275168,95.4771122687163,32.3479980808366,32.6211796583794,58.0245789348869,51.5969068698058,38.1917876554948,104.846354574708,34.4282506682567,30.7411151761751,32.084086874592,42.5206720143715,30.0590328833535,58.8469970458884,61.8363463746553,30.7038513568187,34.2473197127112,42.7903548170061,53.3188122977056,25.5354645004123,35.7207393149185,15.4299956295662,32.4679514072697,35.1445740504487,40.7617298964909,32.0924337405792,60.2613719583058,33.5906803395482,45.6843459552148,38.1402806482125,30.9509772999616,21.6055372800317,33.3119107311597,32.3271517218716,28.3219196585219,38.5076929235053,24.8153480429075,23.0087006874589,19.8760333368332,72.0106066933837,59.7691359876959,36.4414964693622,40.1744562720503,48.6950601308688,120.732906316543,42.2523836454139,21.8313049597258,84.3801668204222,18.2688897571344,66.3874908080989,78.3385636852043,48.8845293344265,57.8993140082942,64.5909082498315,53.3983927250797,33.6705908387455,33.9233016427458,58.0885918478159,53.3270551991766,61.3437654998793,50.4222791884034,46.6234899735098,62.8651452049396,62.6310855447005,25.1209493519571,21.87972123193,31.3784386890611,38.983756696312,22.9852396445786,34.1221432376948,33.2883516901568,29.5468688229139,27.9240370945358,37.3720713070545,34.0971701911416,30.8511084477008,25.6471380961588,26.7617821481237,40.3020820924167,36.434052085252,33.8473245990245,25.711784886133,32.4326891760754,28.1742333378336,37.4141446403074,45.6966254602554,58.5893855814713,36.9152778181196,32.6528093409165,34.3384982310085,48.9657943099298,38.0026376429996,27.4716564146234,28.960456033869,85.8057307954827,50.0811559058989,43.317201457735,35.2342294153036,55.0895398994822,37.2751183661373,33.2841918128796,41.7276999719866,18.5280868296583,37.2782884283802,8.30438985945641,40.1261199603503,21.6246324035933,33.567638935021,37.9973375904318,28.2589759244965,73.2769711604173,45.0127313418987,57.6633406959996,56.1029302297546,53.0727955131188,23.5941992403571,58.1108339236224,10.9993067720211,45.2372933903157,33.5819210338591,55.6165634495499,25.9589389855095,43.2227678853083,46.655794502473,31.206226598091,75.0460687320905,33.34037967345,30.3602794173799,26.648007202782,107.775484491553,23.7956667377284,63.6855206489498,39.4325394810239,30.3617718254825,53.6382401351265,27.861399551564,37.9744391917968,37.9594720320076,48.1768359506989,73.7508428844039,29.1265237221872,21.1740224826243,26.4180704413312,49.5730232089783,115.643230409915,24.4387819067554,20.5267318625068,44.7565780392897,21.7188252362636,32.4174781147092,55.9191540108682,33.8157577597667,70.7729189766511,29.2472349620104,22.6639063257597,29.8573631708822,34.3921026771203,44.2089697788965,35.1870815861836,51.5511545085139,71.9270051824121,33.4201319721889,43.7579847214576,34.5402393120025,55.0794408012117,110.798883946561,29.0020710741881,81.9623808893779,91.8054561657389,66.1592508617928,81.5030645037645,39.0290428715611,31.343644615172,27.438081509987,39.3544753935856,28.9400203676536,24.4661250629814,17.7970243027311,66.1696772729833,52.0052602621966,58.5768821325819,44.7447773049653,38.8669664193519,45.3864103492698,45.5305586405301,42.9797023913016,48.8213986546126,77.714647719253,69.748888731532,23.6226427145862,23.2177128847772,55.9920326069414,36.5693254997236,41.7711962578896,52.9175243554369,57.1572517757754,35.0533508872397,21.7144469965024,32.4883239252327,23.0422189503452,35.2359338678722,15.849330247695,154.735492087907,46.1982630853112,25.5159174894404,37.3997464655537,19.6509149308169,49.3397922400193,46.2599153124742,46.8726240461684,43.6463851479354,32.7589370539682,29.249005922911,27.5385046234986,26.3377685962453,69.3769750563552,39.5936599130732,64.3891772137021,80.2025280883132,40.5749498480064,50.4683530622816,37.4055993559817,34.9361752816788,37.977639251473,46.959685853288,28.9373794806867,35.9481322767474,37.9774921888189,34.8634255387451,50.8855520187652,29.3455105679323,24.4769364687293,39.271562130634,55.0187914136016,29.7596014533401,18.4870251452567,28.5533531001701,42.8965844439268,51.0270221070458,43.4575858469229,53.2381691253145,53.9779158636432,91.0678454390313,56.6599038800768,42.4360710022141,56.5404314629537,58.0418607621146,63.6112924550656,40.3012225792854,45.2322419781107,41.6598468442239,42.9557022927337,39.4704156283759,57.9189140331301,56.3906957193432,40.4953151088348,27.3786640868225,31.3187046517832,40.3796016360768,42.9131859944357,42.4925062149287,33.4056592597249,108.120478080686,21.1987476971545,37.5425507845527,91.558841692967,45.5723719713627,116.507435482465,39.8522111310232,26.2866163688651 | |||
|short_description=p1@CDC73 | |||
}} |
Latest revision as of 11:08, 19 September 2015
Short description: | p1@CDC73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC73_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367435, NM_024529, uc001gtb.2_5end |
EntrezGene: | CDC73 |
HGNC: | 16783 |
UniProt: | Q6P1J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.45e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-10 | 42 |
myeloid cell | 1.14e-07 | 108 |
common myeloid progenitor | 1.14e-07 | 108 |
myeloid leukocyte | 1.61e-07 | 72 |
defensive cell | 8.48e-07 | 48 |
phagocyte | 8.48e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.74e-15 | 114 |
neural tube | 1.91e-07 | 56 |
neural rod | 1.91e-07 | 56 |
future spinal cord | 1.91e-07 | 56 |
neural keel | 1.91e-07 | 56 |
nervous system | 5.57e-07 | 89 |