FFCP PHASE1:Hg19::chr1:207262924..207262935,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |||
|TSSclassifier=strong | |||
|UniProt=B4DDY0 | |||
|association_with_transcript=45bp_to_AK293379_5end | |||
|cluster_id=chr1:207262924..207262935,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_C4BPB_5end | |||
|id=chr1:207262924..207262935,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.83e-14!12;CL:0000417!7.83e-14!12;CL:0000668!7.83e-14!12;CL:0000414!7.83e-14!12;CL:0000412!7.83e-14!12;CL:0000182!7.83e-14!12;CL:0002150!1.49e-11!3;CL:0000861!1.49e-11!3;CL:0002541!1.65e-11!3;CL:0000066!2.45e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.02e-11;3!CL:0002563;1.49e-09;4!CL:0000182;4.36e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.68e-12,3;CL:0002563,1.49e-09,4;CL:0000066,1.41e-07,253;CL:0000182,4.31e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.41e-22;29 | |||
|ontology_enrichment_disease=DOID:305!4.30e-16!106;DOID:0050687!2.73e-10!143;DOID:162!7.69e-10!235;DOID:14566!1.81e-09!239;DOID:4929!6.77e-08!2;DOID:3493!1.10e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.53e-11,106;DOID:0050687,1.64e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.04e-32!9;UBERON:0001557!4.39e-21!19;UBERON:0000077!1.51e-18!130;UBERON:0004921!5.73e-16!129;UBERON:0004185!5.73e-16!129;UBERON:0001041!6.53e-15!98;UBERON:0009497!6.64e-15!25;UBERON:0000015!6.64e-15!25;UBERON:0002423!6.64e-15!25;UBERON:0006235!6.64e-15!25;UBERON:0004161!6.64e-15!25;UBERON:0004119!1.26e-14!169;UBERON:0000925!1.26e-14!169;UBERON:0006595!1.26e-14!169;UBERON:0008835!2.40e-14!22;UBERON:0003894!2.40e-14!22;UBERON:0009854!1.24e-13!23;UBERON:0001007!3.61e-13!155;UBERON:0001555!3.61e-13!155;UBERON:0007026!3.61e-13!155;UBERON:0003929!5.40e-13!54;UBERON:0007499!2.22e-12!25;UBERON:0003124!2.43e-12!7;UBERON:0009856!7.95e-12!26;UBERON:0000476!1.65e-11!3;UBERON:0000920!1.65e-11!3;UBERON:0002107!6.13e-11!19;UBERON:0006925!6.13e-11!19;UBERON:0008836!6.13e-11!19;UBERON:0005057!1.71e-09!26;UBERON:0000072!1.05e-08!46;UBERON:0005631!2.14e-08!14;UBERON:0000158!2.14e-08!14;UBERON:0005911!2.25e-08!82;UBERON:0002368!3.00e-08!35;UBERON:0002394!3.32e-08!4;UBERON:0003928!3.32e-08!4;UBERON:0002294!7.64e-08!7;UBERON:0001173!7.64e-08!7;UBERON:0004912!7.64e-08!7;UBERON:0008947!8.52e-08!38;UBERON:0003258!8.52e-08!38;UBERON:0000949!2.49e-07!45;UBERON:0000065!3.18e-07!53;UBERON:0001048!4.27e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.04e-73;9!UBERON:0001557;3.04e-73;9!UBERON:0000072;6.64e-16;37!UBERON:0000065;2.00e-13;44!UBERON:0003124;1.02e-11;3!UBERON:0000920;1.02e-11;3!UBERON:0001052;1.40e-09;4!UBERON:0001242;1.49e-09;4!UBERON:0001262;1.49e-09;4!UBERON:0004786;1.49e-09;4!UBERON:0004808;1.49e-09;4!UBERON:0001277;1.49e-09;4!UBERON:0004907;7.84e-08;5!UBERON:0002107;1.83e-07;19!UBERON:0006925;1.83e-07;19!UBERON:0001004;3.88e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.68e-73,9;UBERON:0001557,4.00e-34,19;UBERON:0004921,1.46e-17,118;UBERON:0008947,1.93e-16,38;UBERON:0003258,1.93e-16,38;UBERON:0001041,4.43e-14,87;UBERON:0001007,9.25e-14,145;UBERON:0001555,9.25e-14,145;UBERON:0007026,9.25e-14,145;UBERON:0000072,4.79e-13,47;UBERON:0004119,3.39e-12,160;UBERON:0000925,3.39e-12,160;UBERON:0006595,3.39e-12,160;UBERON:0000920,8.68e-12,3;UBERON:0000065,3.47e-11,54;UBERON:0001052,1.43e-09,4;UBERON:0001242,1.49e-09,4;UBERON:0001262,1.49e-09,4;UBERON:0004786,1.49e-09,4;UBERON:0004808,1.49e-09,4;UBERON:0001277,1.49e-09,4;UBERON:0004907,7.98e-08,5;UBERON:0001004,8.24e-08,74;UBERON:0011216,9.16e-08,223;UBERON:0002107,1.81e-07,19;UBERON:0006925,1.81e-07,19;UBERON:0008836,1.81e-07,19;UBERON:0003929,4.85e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19428360107579,3.20310911148393,1.68707720918437,2.64705534557745,3.4860711054785,3.08451804844426,3.37078270400411,4.31687223275761,3.8474715694639,0,0,0,0,13.9430538304014,9.82827216677626,23.6315962672562,0,8.60919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,7.25156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640276590135727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0.113942055847001,0,0,0,1.91400695839152,1.55715908783166,0.533034776018635,0,0,0,0,0,0,0,0,0,0,5.79547592879157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06431964417994,1.38869702463753,0.903270027585302,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.412079291905832,0.539228350833479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3707013745959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,1.28664954824955,0,0.680117776536817,0,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,9.80952571598262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0.898252021065869,0,0,0,0,0,0 | |||
|short_description=p10@C4BPB | |||
}} |
Latest revision as of 07:18, 20 September 2015
Short description: | p10@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C4BPB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 45bp_to_AK293379_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | B4DDY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.68e-12 | 3 |
intestinal epithelial cell | 1.49e-09 | 4 |
epithelial cell | 1.41e-07 | 253 |
hepatocyte | 4.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.68e-73 | 9 |
upper respiratory tract | 4.00e-34 | 19 |
subdivision of digestive tract | 1.46e-17 | 118 |
respiratory primordium | 1.93e-16 | 38 |
endoderm of foregut | 1.93e-16 | 38 |
foregut | 4.43e-14 | 87 |
digestive system | 9.25e-14 | 145 |
digestive tract | 9.25e-14 | 145 |
primitive gut | 9.25e-14 | 145 |
segment of respiratory tract | 4.79e-13 | 47 |
endoderm-derived structure | 3.39e-12 | 160 |
endoderm | 3.39e-12 | 160 |
presumptive endoderm | 3.39e-12 | 160 |
egg chorion | 8.68e-12 | 3 |
respiratory tract | 3.47e-11 | 54 |
rectum | 1.43e-09 | 4 |
intestinal mucosa | 1.49e-09 | 4 |
wall of intestine | 1.49e-09 | 4 |
gastrointestinal system mucosa | 1.49e-09 | 4 |
gastrointestinal system epithelium | 1.49e-09 | 4 |
intestinal epithelium | 1.49e-09 | 4 |
lower digestive tract | 7.98e-08 | 5 |
respiratory system | 8.24e-08 | 74 |
organ system subdivision | 9.16e-08 | 223 |
liver | 1.81e-07 | 19 |
digestive gland | 1.81e-07 | 19 |
liver bud | 1.81e-07 | 19 |
gut epithelium | 4.85e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.53e-11 | 106 |
cell type cancer | 1.64e-07 | 143 |