FFCP PHASE1:Hg19::chr20:17949081..17949092,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14969 | |||
|TSSclassifier=strong | |||
|UniProt=Q5QPE5 | |||
|association_with_transcript=8bp_to_ENST00000431277_5end | |||
|cluster_id=chr20:17949081..17949092,- | |||
|description=CAGE_peak_4_at_SNX5_5end | |||
|id=chr20:17949081..17949092,- | |||
|ontology_enrichment_celltype=CL:0000557!2.83e-07!71;CL:0000839!9.81e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.07e-11,67;CL:0000839,7.81e-11,66;CL:0000766,4.11e-09,72;CL:0002009,3.36e-08,61;CL:0002194,4.24e-08,59;CL:0000576,4.24e-08,59;CL:0000040,4.24e-08,59;CL:0000559,4.24e-08,59;CL:0000763,8.08e-08,108;CL:0000049,8.08e-08,108;CL:0000097,1.75e-07,5;CL:0002028,1.75e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.65e-08!102;UBERON:0003061!4.65e-08!102;UBERON:0002193!8.89e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-11,98;UBERON:0003061,1.83e-11,98;UBERON:0002371,2.67e-10,76;UBERON:0002193,6.32e-10,108;UBERON:0002405,7.77e-10,93;UBERON:0001474,8.76e-09,82;UBERON:0004765,2.56e-08,90;UBERON:0001434,1.56e-07,100 | |||
|phase1_expression=0.54503513781167,0.856402095563933,1.26858963686374,3.00219895059391,1.34088328328186,0.872338524100369,0,0.631719873426831,1.04474251279935,0.245733936501509,0,0.218441372130172,0,0.74259811776028,0.994192127183747,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0,0.626909442956176,0.85870796139317,0.136874425072884,0.125542639594803,0.458480434487708,0.57470412614962,0.629686250509434,0,0.767658796194425,0.77408061658038,0,0,0,0.92960640696362,0.284338464974843,2.05520307534393,0,0,0.868043482863407,8.50878802111712,6.15397965436061,6.18181362322048,0.436194716338694,2.64513160582167,0.727752183563449,1.16214518452842,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,1.35426486594342,0.941211697713023,0.545812300115692,0.898893937780338,1.22433556948361,1.28371610830437,0.639337125799041,0,0.598390972864896,0.852449501065388,0.870627715885752,0.56738522469114,0,0.251248665256743,2.08593167368081,1.3031330682307,0,0.368277635987565,0.316462387440884,2.5350634357433,2.55125159958052,2.72556239160889,2.02191536063691,1.65194582125657,0.48217676009124,6.27028036230747,5.17183360717634,4.20127553658658,0,2.18455444504853,2.66852776159066,1.70692089026603,0.800791974072025,1.14950487990897,1.98313461835459,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,1.05353633910031,0.196709770113833,0.393010762749165,0,1.83905144929746,0,0,0,2.67385096524417,0.294605907474837,0.664601683750863,0.541607727530031,1.79327847615945,1.69077151827842,0.986627427622057,0.552700035571697,0.579606171470105,0.296573126324121,0.267540828089713,0,1.13309342697566,0,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.710331756132051,0,0.201606743224732,0.267440195783507,0.289648807765598,2.43806866313962,1.34140171940727,0.383587685530591,0.361439152384566,1.00267582127178,1.15877215168659,2.3858578411533,1.45990461090791,0.850813354476611,0.886917589850256,1.05401742831751,1.24430121722827,0.364295288292542,0,11.3591587779139,9.5771355514597,9.04114131528283,0.715471872916026,1.14398982156026,0.74291500265913,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,1.14734648299525,0.709336764396714,0.560677600142307,0,0.24666754841716,1.24484414159907,0.269421344139376,0.326923806226917,0.605429710579726,0,0,0.312160076830321,1.1409436430889,0.896692083310806,0,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.45071417671979,0.113432183160021,0.717558542755448,0.640672166455702,0.423863802319124,1.20036438433761,0.618315175430633,0.772921620136887,0.744467425326359,0.843881661206331,0.487185025805993,0.504867548488229,0.552299391853796,1.61646056818812,0.355009592516614,0.705264687593482,0.339121184620975,0.57978255948989,0,0,1.09776335516636,1.06023814657188,1.16193942869518,0.621966330092223,0.504641701751257,1.09493207722749,1.56449532329816,0,0,0.928735856063958,0,0.473227200159376,0.505754070234305,0.964044119533928,0.441175890929576,0.217879444092406,0.474541238222193,0.943819157121151,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,1.96565443335525,0,0.441463099414651,1.47586126251736,1.20097467208968,0.329250856225877,0,0.201057944823262,0.740707561268237,0,0,0,0.695582429850461,1.17408694235822,0,0.462985512576611,0.380508304469197,1.58040879591855,0,5.41677413392274,6.08411089362018,2.82399208348584,0,0.16798212819886,0,1.25381931783988,0.290633938513962,0,5.91195885475132,4.49047013467453,3.7319060797339,2.88239906833923,3.28230326908588,0.888970520090367,0,0,0,0.205654985406647,0.300343057843917,0.857479297891735,0.336393253036082,0.87192013766656,0.1466765716419,0.517086863031111,0,0,0,0,0.257207374262142,1.41849132023278,0,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,6.08118903205952,2.51128545716063,0,0.239624855491583,1.14861935834114,0,0.868687840005475,0.205476322550383,0.537182889719687,1.12085143993527,0.197030760201927,0,0.385029108839245,1.27047312111232,0,0,0.167516265334349,0,0,0,0,2.82190430954022,1.00034104211935,0.813795071099207,0.207970861530807,1.24900292158013,0.630809660135739,0,1.20378439891088,6.82222512167955,1.03473071292505,0,0.184369168541703,1.04260337361699,0.391602314925481,2.05886054286514,0.82707210449155,0.215714200818617,0.426910231213777,0,0,0.907170879989041,0.744323423456331,0.61384789315225,0.561320188866147,0.768834895534206,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.887808626565635,0.739144404124282,0.519254429183621,0.348631135379878,1.32945394550784,0,0.276242966807689,0.34444334449382,0,1.18011973463482,0,0.15403067420883,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0.512900250232778,0.328014645699706,0.650756789328606,0.9273691048295,0.0915694648183434,0.082509499920588,0,0,3.21367859688319,0.193341436584244,0.462145851343933,0.767518373630648,0,1.18162269355101,0.435050081742686,0.426133137080504,0.979352392114111,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0.924100740528266,0,0,0.37064843820784,0.715624433709956,1.48863347743867,0.316379424718726,0.571890581771475,0,0,0,0,0.179872457583315,0.54907405947211,0.589062011728432,0,0,0.421258456238981,0.48763373908959,0,0,0.818999468447914,0.282810863907425,1.13008116620243,1.10273068709225,0,0,0.578775534266688,0.655894752046633,0.405820753925408,1.54911749049875,0,0,0.0982490410131212,1.07001315444375,0.354761064070598,1.26664581178598,1.31717957183961,0,0.349934720244983,0,0,0,1.31801321087491,0,0,0,0.459446800413919,0.507447609232169,1.52927441428475,0.569647187174163,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,1.58625035258854,0.640944426764839,0,0,1.11481905075431,0.432807638929335,0.497992903438899,0.637705090915289,0.399158742865633,1.91505370132367,0.846694330895531,1.29848776109822,0.561594356226918,1.14117339516596,0.313359791546046,0,0,0.1605880751037,0.403599414382095,1.27753871307098,0.343505344755765,0.307240764308458,0.447352215784832,0.333698283423817,0,0.835218521685727,0,0.540911356951966,0.99921590399346,1.4098700508785,0,0.73254089635947,0.606802608747567,0,0.284136146806413,1.19372242368845,1.18785872333055,0.307160702099232,0.994147647766298,0.281338832821026,1.11308705022906,0,1.05562704063997,0.19924798825107,1.10513566212459,1.25966373927138,0.613612095012929,1.10776324914963,0.622079175323615,0.718946809178615,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,1.57705766875147,0,0.7812832832557,0.61221999997337,0,0.1137934482855,0.508507300585533,0,0,0.874813840149763,0.520874984799877,1.77148277162768,0.844175070377856,0,0.221158519862449,0.591095237907095,1.09692698576986,0.435753854075961,1.25481369850743,1.30815439456455,0.341826167541004,0.23056390438806,0.269272933229316,0.760531603454056,0.957003479195758,0.457987967009312,1.5991043280559,0,1.2558420511602,1.82832850090172,0.451191321234361,0,0.167821586975843,0.37950746544837,1.43042921082341,0.210998064528027,1.14262965711403,0.282706142867882,0.865554558968364,0,0.707660516026713,3.05515072466813,1.77912677208373,1.97702302314405,0.835375596043643,0.943615861729479,0.802577647298789,1.40558667435203,0.547364367646998,0.978323094660449,0.485560759068186,0,1.20990716048664,0.30607276163049,1.83241080922615,2.25485129121739,0.414752765588989,0,0,0,0,0,0.138674673013139,0.520679215005393,0.391969589657511,0.522355239482415,5.06707337901887,0,0.0967563312890851,0.292357268344742,0.164230914106418,0.387956065953678,0.706049013532002,1.80784592624426,0.274083849293502,0,0.823040347426423,0.391102765469606,0.160317640503067,0.213452994739353,0,0,0.343609788497747,1.20116498503375,0,0.372757606696298,0,0.407712618220842,0.313808538937,0.815985741090574,0.577901179803038,0,0.410716136675979,0,0,0.262887354279314,1.11712960508902,0.916641696046735,0,0.599037001496973,0,0.669514372325618,1.14211903227435,0,1.16495949527454,0.86661500537946,0.659326867049332,1.21326378937533,0.295282444544246,0.254019996197353,0.795229689809303,0.953423842781029,0.160753148465019,0.687697182986169,0.83088067605837,1.1248694577575,0.77380195455795,0.607495566580247,1.0063040627978,1.97014268247995,1.36381929150995,0.422401346077626,1.25501137532991,0.383830394638891,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.979762080328227,0,1.80603545648546,0.681552087141687,1.35974509824151,0.58620893471233,0,0.646414781807753,0.92562821219883,1.02652102730598,0,0.854299300541557,1.41483874589699,2.07119527673598,1.9846640872478,0.790446527591777,0.243585196761792,0,0,1.7548292581589,2.75711019087115,1.96723578425883,0.157054096250234,0.886068179966986,0.854183854313742,0.751145584238999,0.573409195690071,0.221858103073705,0.931446044120752,0.138348634936231,0.74988244777264,0.303298235083296,0.856396000634902,0.470531639396343,0.468334905806882,0.434763085832475,0.447764408660622,1.16856654923612,0.554805861502613,0.947015026375446,0.251567901752575,0,0,0.302461847526478,0.621748802331122,0.73927574994817,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0.363697318405119,0.751873899297419,1.39210127963548,0,1.60011105865261,1.37358282073117,0.336749488765919,0,0,1.71553273099941,0.260994291965212,0.226705925512272,0,0.489473409012935,0.179088841081487,0.308801447160972,0.438568099157414,0.176689145945881,0.38582807654183,0.506827321959218,1.02496607435179,0,0.607719912354764,0.691292180758654,0.194860308839388,0,0,0.327609848846413,0.245772908753719,0.422624246717254,2.19986135440423,0.426766918776564,0.516644938982447,0,0.736423801007363,0,1.24415452006595,0.127894371303652,0.323474434190045,0.471797825567689,0.436838552768056,0.169732529954025,0.850299680406731,0.247871528518004,0,0.318004350653419,2.76016107504387,0,0.705351887381368,0.3062454773532,0.963438376446893,0,0.478901577171454,2.05116364240755,0,0.899044282034833,0.968853873791107,1.42769420259154,0.490738592505128,0.11796972334774,0.366857197043358,0.577628330751691,0.381382095467167,0,0.596748666348824,0.601682626794058,0.20170506870352,0,0.261906694481422,0.655087670040387,0.295712172434091,1.89105236931505,0,0.826747186004736,1.39514782426595,0,0.548257766857182,0.496211178389294,1.75871244359621,0.766574565837572,0,0,1.21393120847326,0.682986574053893,0.532214220975833,0.691403925334676,1.02892805662451,0.747667062745149,1.05236437700559,0.472775363535873,0,0.941917114206168,0.942693539496011,1.68163297988273,0,0.431855182437243,0,1.28657779517981,0.158013611732727,0,0.173858272302579,0.801711364730253,1.45051314914126,0.85359238546975,0.691259661814092,0,0.236664001461131,0.340853619036631,0.423387050190929,0.9164274741762,0.93061915699296,0,0.782988022584546,0.392600934460972,1.21917924982269,0,1.43727929598746,2.3196288626764,0,0.935757853848423,1.19370465096821,0.118920090777569,0.90356865631168,0,0.754814217833368,1.46630900405095,4.15263164957519,0,0.735444965261716,0.471353094203252,1.37415926980462,0.891139200981258,1.2679671827502,0.509781344063451,1.87967835959707,2.19156819110162,1.59905849479886,0.357107877211315,0,0.320965466756673,0.730336388246517,0.458729283404541,0.430018749454354,0,0.543931921527318,0.436350690340377,1.0580536810308,0.371995018166751,1.38652688589425,0,0.126166424835079,0.327796715891087,0.380095503034311,0.509944148709909,0.26721740526556,0.0918948995348449,0,0.530450887527676,0.267964130156178,1.65833887891756,0.724030971033267,1.27940389140589,2.14257988317366,0.258355639344024,0.682821857254437,1.12131862580613,7.12848172715447,6.87198442457946,0.217716747896961,1.36893320434112,0.673520530145875,0.860666464712116,1.66330178273007,0.0814032686109745,0.426909383510862,0,0.538951212639521,2.34640942403454,0.855690109280065,0.406896178315738,0,0.201273793591026,1.28227396921293 | |||
|short_description=p4@SNX5 | |||
}} |
Latest revision as of 06:48, 20 September 2015
Short description: | p4@SNX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000431277_5end |
EntrezGene: | SNX5 |
HGNC: | 14969 |
UniProt: | Q5QPE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.07e-11 | 67 |
myeloid lineage restricted progenitor cell | 7.81e-11 | 66 |
myeloid leukocyte | 4.11e-09 | 72 |
macrophage dendritic cell progenitor | 3.36e-08 | 61 |
monopoietic cell | 4.24e-08 | 59 |
monocyte | 4.24e-08 | 59 |
monoblast | 4.24e-08 | 59 |
promonocyte | 4.24e-08 | 59 |
myeloid cell | 8.08e-08 | 108 |
common myeloid progenitor | 8.08e-08 | 108 |
mast cell | 1.75e-07 | 5 |
basophil mast progenitor cell | 1.75e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-11 | 98 |
blood island | 1.83e-11 | 98 |
bone marrow | 2.67e-10 | 76 |
hemolymphoid system | 6.32e-10 | 108 |
immune system | 7.77e-10 | 93 |
bone element | 8.76e-09 | 82 |
skeletal element | 2.56e-08 | 90 |
skeletal system | 1.56e-07 | 100 |