FFCP PHASE1:Hg19::chr20:33135242..33135246,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:33135242..33135246,+ | |||
|description=CAGE_peak_at_chr20:33135242..33135246,+ | |||
|id=chr20:33135242..33135246,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;5.15e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.66e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.53e-09;5 | |||
|ontology_enrichment_disease=DOID:305!5.63e-15!106;DOID:162!2.42e-14!235;DOID:14566!9.20e-14!239;DOID:0050687!2.96e-12!143;DOID:0050686!3.04e-09!137;DOID:4362!2.76e-08!5;DOID:3093!3.40e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000002!6.97e-07!6;UBERON:0001560!6.97e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0006955;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0001052;3.26e-11;4!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0002046;2.53e-09;5!UBERON:0004907;3.10e-09;5!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6!UBERON:0001871;5.86e-07;6!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.66e-21,2;UBERON:0004801,4.66e-21,2;UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0001052,2.80e-11,4;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0002046,2.53e-09,5;UBERON:0004117,2.53e-09,5;UBERON:0007689,2.53e-09,5;UBERON:0007123,2.53e-09,5;UBERON:0003091,2.53e-09,5;UBERON:0004907,2.74e-09,5;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0001871,6.04e-07,6;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11486539543521,0,0,0,0,1.25966373927138,0.102268682502155,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.331737779793674,0.886642856860642,0,0.21787692703798,0,0,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0.141353071433941,0,0.995261931078505,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.391969589657511,0.261177619741208,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,1.00885116665647,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,1.82631744101899,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0.33883824611688,0.109940516745429,0.150962843566674,0.540219106755613,0,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:33135242..33135246,+ | |||
}} |
Latest revision as of 13:15, 28 July 2015
Short description: | p@chr20:33135242..33135246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33135242..33135246, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.66e-21 | 2 |
cervix epithelium | 4.66e-21 | 2 |
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
rectum | 2.80e-11 | 4 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
thyroid gland | 2.53e-09 | 5 |
pharyngeal pouch | 2.53e-09 | 5 |
thyroid diverticulum | 2.53e-09 | 5 |
pharyngeal pouch 2 | 2.53e-09 | 5 |
thyroid primordium | 2.53e-09 | 5 |
lower digestive tract | 2.74e-09 | 5 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
temporal lobe | 6.04e-07 | 6 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.97e-09 | 5 |