FFCP PHASE1:Hg19::chr2:148702262..148702267,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:148702262..148702267,- | |||
|description=CAGE_peak_at_chr2:148702262..148702267,- | |||
|id=chr2:148702262..148702267,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;5.43e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.86e-15;3 | |||
|ontology_enrichment_disease=DOID:162!1.00e-16!235;DOID:14566!6.75e-16!239;DOID:0050687!1.50e-12!143;DOID:0050686!2.42e-11!137;DOID:2531!4.22e-07!51;DOID:0060083!4.22e-07!51;DOID:171!6.10e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.82e-29;10!DOID:3095;8.17e-16;22!DOID:2994;8.17e-16;22!DOID:169;1.07e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.64e-29,10;DOID:3095,1.14e-15,22;DOID:2994,1.14e-15,22;DOID:169,1.52e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.73e-08!57;UBERON:0005068!1.73e-08!57;UBERON:0006241!1.73e-08!57;UBERON:0007135!1.73e-08!57;UBERON:0007023!3.92e-08!115;UBERON:0002780!3.15e-07!41;UBERON:0001890!3.15e-07!41;UBERON:0006240!3.15e-07!41;UBERON:0002346!3.18e-07!90;UBERON:0002616!4.21e-07!59;UBERON:0000955!4.82e-07!69;UBERON:0006238!4.82e-07!69;UBERON:0003080!8.71e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;1.06e-23;5!UBERON:0005423;1.06e-23;5!UBERON:0002346;2.09e-19;4!UBERON:0000923;2.09e-19;4!UBERON:0010316;2.09e-19;4!UBERON:0005291;2.09e-19;4!UBERON:0000922;2.76e-09;49!UBERON:0002021;5.43e-09;5!UBERON:0000013;5.43e-09;5!UBERON:0002410;5.43e-09;5!UBERON:0002037;8.56e-08;6!UBERON:0001950;1.85e-07;20!UBERON:0002114;1.93e-07;2!UBERON:0002619;9.28e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.24e-09,5;UBERON:0002346,4.37e-09,86;UBERON:0000013,8.97e-09,5;UBERON:0002410,8.97e-09,5;UBERON:0000073,1.26e-08,53;UBERON:0002616,1.26e-08,53;UBERON:0001049,4.63e-08,56;UBERON:0005068,4.63e-08,56;UBERON:0006241,4.63e-08,56;UBERON:0007135,4.63e-08,56;UBERON:0001950,7.35e-08,20;UBERON:0002037,8.63e-08,6;UBERON:0006215,8.63e-08,6;UBERON:0002114,3.18e-07,2;UBERON:0001016,4.03e-07,89;UBERON:0002619,4.05e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0,0.458480434487708,0.410502947249729,0.629686250509434,0,0.383829398097213,0.154816123316076,0,0,0,0.774672005803016,0.853015394924529,0.293600439334847,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0,0,0,0.526768169550154,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.640456598628376,0.520237390239513,0.822189523018381,0,0.579606171470105,0.14828656316206,0,0,0,0,0.34362744548263,0,0.637130828648193,0,0,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0,1.06976078313403,0.144824403882799,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.351339142772504,0.392937226493138,0.364295288292542,0,0.324547393654683,0.522389211897802,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0.204154171254893,0.491337269247072,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,0.506328996723799,0,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.10366105501537,0,1.09493207722749,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0.336255431980582,0.591092280605782,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.535286966391485,0.630809660135739,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.276242966807689,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0.330037999682352,0,0,0,0,0,0.307007349452259,0.137836572484531,0,0.580066775656914,0.170453254832202,0,0,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.753150406214233,0,0,0,0,0,1.52927441428475,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0.427296284509893,0.962479855263359,1.22520107990516,0.929015875628594,0.144269212976445,0.569134746787313,0,0.59873811429845,0,0.211673582723883,0.324621940274555,0,0.684704037099577,0.156679895773023,5.01268954180134,0.169291777801603,0.321176150207399,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.19538809540204,0.556812347790485,1.23087398947712,0.540911356951966,0.33307196799782,1.4098700508785,0,0.146508179271894,0.121360521749513,0.334330152832435,0,0,0,0,0,1.54736358051564,0.445234820091624,0.329607748453519,0.844501632511974,0.19924798825107,0.552567831062295,0.503865495708552,0.306806047506464,0.246169610922139,0.311039587661807,0.449341755736634,0.358042349351218,0.511572370226872,0.0986434056369336,0,2.22273980289274,0,0.185536196323703,0,0.520855522170466,0.262379999988587,0,0.341380344856499,0.508507300585533,0.236387681767936,0.344743373241465,1.16641845353302,0.868124974666461,0.885741385813839,0.482385754501632,4.5774520895125,1.3269511191747,1.18219047581419,0,0.21787692703798,0,0.307801034015188,0,0.46112780877612,0.448788222048861,0,0,0,0,0,0.627921025580099,0.498635045700469,0.225595660617181,0,0.167821586975843,0.37950746544837,0.635746315921515,0.843992258112108,0.326465616318295,0.424059214301822,1.08194319871046,0.995261931078505,0.265372693510018,1.83309043480088,0.296521128680622,0.494255755786011,0.313265848516366,0.202203398942031,0,0.234264445725339,0.364909578431332,0,0,0.394584402849391,0,1.83643656978294,0.31593289814244,0.150323419414493,0.207376382794494,0.664653872707185,0,0.313932918407225,0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| |||
|short_description=p@chr2:148702262..148702267,- | |||
}} |
Latest revision as of 01:07, 29 July 2015
Short description: | p@chr2:148702262..148702267, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:148702262..148702267, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.24e-09 | 5 |
neurectoderm | 4.37e-09 | 86 |
sympathetic nervous system | 8.97e-09 | 5 |
autonomic nervous system | 8.97e-09 | 5 |
regional part of nervous system | 1.26e-08 | 53 |
regional part of brain | 1.26e-08 | 53 |
neural tube | 4.63e-08 | 56 |
neural rod | 4.63e-08 | 56 |
future spinal cord | 4.63e-08 | 56 |
neural keel | 4.63e-08 | 56 |
neocortex | 7.35e-08 | 20 |
cerebellum | 8.63e-08 | 6 |
rhombic lip | 8.63e-08 | 6 |
duodenum | 3.18e-07 | 2 |
nervous system | 4.03e-07 | 89 |
regional part of cerebral cortex | 4.05e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.64e-29 | 10 |
germ cell and embryonal cancer | 1.14e-15 | 22 |
germ cell cancer | 1.14e-15 | 22 |
neuroendocrine tumor | 1.52e-12 | 6 |