FFCP PHASE1:Hg19::chr2:169984103..169984112,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:169984103..169984112,- | |||
|description=CAGE_peak_at_chr2:169984103..169984112,- | |||
|id=chr2:169984103..169984112,- | |||
|ontology_enrichment_celltype=CL:0002616!1.43e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.33e-15;2!CL:0000174;7.42e-11;3!CL:0000083;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.33e-15,2;CL:0000174,7.42e-11,3;CL:0000083,1.96e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.73e-29;1!UBERON:0003056;1.04e-10;3!UBERON:0007123;6.21e-07;5 | |||
|ontology_enrichment_disease=DOID:1799!9.44e-10!1;DOID:10165!9.44e-10!1;DOID:1798!9.44e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;9.98e-30;1!DOID:10165;9.98e-30;1!DOID:1798;9.98e-30;1!DOID:170;5.35e-20;6!DOID:1793;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.33e-29,1;DOID:10165,1.33e-29,1;DOID:1798,1.33e-29,1;DOID:170,5.89e-20,6;DOID:1793,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0006331!2.71e-24!3;UBERON:0002148!1.14e-16!2;UBERON:0009662!1.14e-16!2;UBERON:0002308!2.60e-14!9;UBERON:0000125!2.60e-14!9;UBERON:0000988!1.97e-11!3;UBERON:0000941!1.03e-09!1;UBERON:0004904!1.03e-09!1;UBERON:0002464!1.03e-09!1;UBERON:0001021!1.03e-09!1;UBERON:0001785!1.03e-09!1;UBERON:0002298!1.80e-09!8;UBERON:0002038!2.16e-09!1;UBERON:0009661!2.16e-09!1;UBERON:0007023!2.23e-09!115;UBERON:0001301!3.00e-09!1;UBERON:0001049!1.04e-07!57;UBERON:0005068!1.04e-07!57;UBERON:0006241!1.04e-07!57;UBERON:0007135!1.04e-07!57;UBERON:0002020!1.18e-07!34;UBERON:0003528!1.18e-07!34;UBERON:0002616!2.03e-07!59;UBERON:0002046!2.68e-07!5;UBERON:0004117!2.68e-07!5;UBERON:0007689!2.68e-07!5;UBERON:0007123!2.68e-07!5;UBERON:0003091!2.68e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0002369;7.42e-11;3!UBERON:0001235;7.42e-11;3!UBERON:0006858;7.42e-11;3!UBERON:0002368;2.15e-07;33!UBERON:0000949;3.81e-07;43!UBERON:0002046;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-29,1;UBERON:0001785,1.78e-29,1;UBERON:0002464,1.78e-29,1;UBERON:0004904,1.78e-29,1;UBERON:0001021,1.78e-29,1;UBERON:0003902,1.78e-29,1;UBERON:0005425,1.78e-29,1;UBERON:0003714,1.78e-15,2;UBERON:0005162,1.78e-15,2;UBERON:0000122,1.78e-15,2;UBERON:0002369,7.42e-11,3;UBERON:0001235,7.42e-11,3;UBERON:0006858,7.42e-11,3;UBERON:0000949,1.44e-10,45;UBERON:0001781,2.11e-08,4;UBERON:0002368,5.59e-08,35;UBERON:0002046,6.04e-07,5;UBERON:0004117,6.04e-07,5;UBERON:0007689,6.04e-07,5;UBERON:0007123,6.04e-07,5;UBERON:0003091,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,1.1528195219403,0,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91581117007033,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.714193294391221,0,0,0,0.0636471582781649,1.21270313374932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:169984103..169984112,- | |||
}} |
Latest revision as of 02:17, 29 July 2015
Short description: | p@chr2:169984103..169984112, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:169984103..169984112, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.33e-15 | 2 |
steroid hormone secreting cell | 7.42e-11 | 3 |
epithelial cell of pancreas | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-29 | 1 |
cranial nerve | 1.78e-29 | 1 |
nerve trunk | 1.78e-29 | 1 |
nerve connecting eye with brain | 1.78e-29 | 1 |
nerve | 1.78e-29 | 1 |
retinal neural layer | 1.78e-29 | 1 |
presumptive neural retina | 1.78e-29 | 1 |
neural tissue | 1.78e-15 | 2 |
multi cell component structure | 1.78e-15 | 2 |
neuron projection bundle | 1.78e-15 | 2 |
adrenal gland | 7.42e-11 | 3 |
adrenal cortex | 7.42e-11 | 3 |
adrenal/interrenal gland | 7.42e-11 | 3 |
endocrine system | 1.44e-10 | 45 |
layer of retina | 2.11e-08 | 4 |
endocrine gland | 5.59e-08 | 35 |
thyroid gland | 6.04e-07 | 5 |
pharyngeal pouch | 6.04e-07 | 5 |
thyroid diverticulum | 6.04e-07 | 5 |
pharyngeal pouch 2 | 6.04e-07 | 5 |
thyroid primordium | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.33e-29 | 1 |
endocrine pancreas cancer | 1.33e-29 | 1 |
pancreatic endocrine carcinoma | 1.33e-29 | 1 |
endocrine gland cancer | 5.89e-20 | 6 |
pancreatic cancer | 1.96e-08 | 4 |