FFCP PHASE1:Hg19::chr2:196521610..196521660,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z341 | |||
|association_with_transcript=0bp_to_ENST00000444421_5end | |||
|cluster_id=chr2:196521610..196521660,+ | |||
|coexpression_cluster_id=C1020 | |||
|description=CAGE_peak_5_at_SLC39A10_5end | |||
|id=chr2:196521610..196521660,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.46e-20!172;CL:0000566!4.46e-20!172;CL:0002032!6.03e-19!165;CL:0000837!6.03e-19!165;CL:0000988!6.39e-19!182;CL:0000542!1.36e-16!53;CL:0000051!1.36e-16!53;CL:0000838!5.10e-16!52;CL:0000738!6.05e-16!140;CL:0002087!1.64e-14!119;CL:0002031!1.96e-14!124;CL:0000791!1.79e-10!18;CL:0000789!1.79e-10!18;CL:0002420!1.79e-10!18;CL:0002419!1.79e-10!18;CL:0000790!1.79e-10!18;CL:0000084!9.11e-09!25;CL:0000827!9.11e-09!25;CL:0000134!7.63e-08!358;CL:0002320!1.54e-07!365;CL:0000625!2.26e-07!11;CL:0000945!3.77e-07!24;CL:0000826!3.77e-07!24;CL:0000236!3.95e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.32e-14;18!CL:0000789;4.32e-14;18!CL:0002419;4.32e-14;18!CL:0000542;2.82e-11;53!CL:0000236;2.54e-10;13!CL:0000625;2.81e-10;11!CL:0000084;3.53e-10;25!CL:0000097;6.12e-07;5!CL:0000945;6.97e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.01e-19,53;CL:0000051,1.01e-19,53;CL:0000838,8.59e-19,52;CL:0000037,6.90e-18,168;CL:0000988,1.50e-16,177;CL:0002032,1.51e-15,161;CL:0000837,1.51e-15,161;CL:0000738,5.71e-15,136;CL:0000791,7.94e-15,18;CL:0000789,7.94e-15,18;CL:0002420,7.94e-15,18;CL:0002419,7.94e-15,18;CL:0000790,7.94e-15,18;CL:0002087,3.78e-12,115;CL:0002031,7.67e-12,120;CL:0000084,1.12e-10,25;CL:0000827,1.12e-10,25;CL:0000625,1.44e-10,11;CL:0000236,1.35e-09,14;CL:0000945,3.38e-07,24;CL:0000826,3.38e-07,24;CL:0000097,5.47e-07,5;CL:0002028,5.47e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;4.32e-14;18!CL:0000051;2.82e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.58e-07!375;UBERON:0002390!8.93e-07!102;UBERON:0003061!8.93e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.10e-08;22!UBERON:0001950;1.17e-07;20!UBERON:0001737;2.44e-07;9!UBERON:0001557;2.44e-07;9!UBERON:0000178;3.61e-07;15!UBERON:0000179;3.61e-07;15!UBERON:0000463;3.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.39e-08,22;UBERON:0001950,7.03e-08,20;UBERON:0001557,1.06e-07,19;UBERON:0001737,3.01e-07,9;UBERON:0000178,3.20e-07,15;UBERON:0000179,3.20e-07,15;UBERON:0000463,3.20e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.12763523276777,0,0.446961094427288,0,0,0,0,0,0,0.655324116390517,0,1.11389717664042,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.627713197974014,2.13957536094264,1.55991119954897,1.96776953284198,2.36018566109342,1.15148819429164,0.928896739896456,0,0,0,0.542270404062111,0.568676929949686,2.05520307534393,0.553995408531877,0.802177789880567,0.651032612147555,0.223915474239924,0.32389366601898,0.257575567634187,0.436194716338694,1.51150377475524,0.727752183563449,0.697287110717054,1.23350366406548,0.309706370895104,0.28769239232215,0.768482119587302,0.47296445977717,0.689491361473237,0,1.35426486594342,0,1.09162460023138,0.449446968890169,1.22433556948361,0.962787081228281,1.27867425159808,0.329851300186716,0.199463657621632,1.70489900213078,0.870627715885752,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,1.10483290796269,0.316462387440884,0.845021145247767,1.27562579979026,0.419317291016752,0.673971786878971,0.600707571366025,0.16072558669708,0.285012743741249,0.99458338599545,1.27864907635244,3.51992488922645,3.27683166757279,3.55803701545422,2.98711155796555,3.60356388332411,3.4485146397269,1.98313461835459,3.81621501814146,2.84606484554724,5.28513470433845,0.382273228125229,2.64342657158052,1.68152568894461,2.10707267820062,3.73748563216283,1.96505381374582,1.43921049299656,5.85152733867373,2.60737813306872,4.2610302516126,3.89653456815823,3.23090324967003,0.883817722424512,1.99380505125259,2.97884250141517,2.0494611156108,2.08094956095805,5.91976456573234,4.69795030235942,4.63684937176084,3.70716407905151,6.68852070224283,5.22677619024884,6.11870450566857,4.21542542962113,3.09264700934367,4.30133476433155,1.59282707162048,3.90650072313851,0.950452044448374,3.91495309602209,2.55973222308837,4.99722906209383,3.07810427657222,4.10563998460523,2.41928091869679,2.94184215361858,2.60683926989038,0,0.670700859703636,0,2.1686349143074,1.00267582127178,1.59331170856906,3.1811437882044,0.486634870302636,1.51255707462509,1.10864698731282,0.87834785693126,0.589405839739707,0,0,0.324547393654683,0.348259474598534,0.398873881556595,1.43094374583205,1.71598473234038,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0,0.735326160691737,0,0.892997282840798,0.44905874525234,0.563057402416611,0,0.949265659568129,0,0,7.75560528296651,0,0.496971951695318,0.12663051166458,0.397227542439656,0.860509862246441,0,0,0,0,0.311211035399766,0.134710672069688,0,0,1.15235184896,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.280901613404497,1.02077085627447,0,0.206651562351531,0,0.494533858557114,0,0,0.336672227908132,1.37630371859161,0,0.438977620880838,0,0.751190294532984,0.680593098960126,0.538168907066586,0.213557388818567,0.635795703478686,1.80054657650641,0.206105058476878,0.515281080091258,0,1.5189869901714,0.974370051611986,0.757301322732344,0.828449087780694,0.323292113637624,0.710019185033229,0.604512589365842,1.01736355386293,0.386521706326594,0.545492241181669,1.43402297694502,0.731842236777572,0.662648841607426,0.464775771478074,0.829288440122964,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0.464367928031979,0,1.0647612003586,1.34867752062481,2.16909926895134,1.43382164552112,1.08939722046203,1.18635309555548,1.48314438976181,1.96221465125346,1.92373578473195,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.548751427043128,0,0.301586917234893,0.925884451585296,0,0,0,1.27523445472584,1.87853910777315,0.288732895522148,0,0.190254152234598,0,0,0,0.702012795417713,0.297262324577456,0,1.00789276919316,1.13420077793909,0.268675568108545,0.290633938513962,0.766765358330422,27.5891413221728,14.5279916121823,3.10992173311158,1.58531948758658,3.1560608356595,0.190493682876507,0,0,0,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0.51336800074665,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,2.61460037580088,0.799783929456456,0,0,0,0.479249710983165,0,1.42636905040718,0.579125226670317,0.205476322550383,1.07436577943937,1.79336230389644,3.94061520403854,2.58753089831421,1.66845947163673,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.858840442033979,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.117141414992713,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0.521301686808497,0.391602314925481,0,4.34212854858063,2.5885704098234,2.24127871387233,0,0,0.30239029332968,0.744323423456331,0.767309866440312,0.280660094433074,0.640695746278505,1.53512174720011,0.482561763430822,0,0.154209693802656,0.532685175939381,0.328508624055237,0,0.348631135379878,0.362578348774867,0.200506470303285,0.184161977871793,0.68888668898764,0.546273504020151,0.262248829918848,0.451199612907412,1.5403067420883,0,0,1.16106791782163,0,0,0.431831832204279,0,0.541892875087706,0,0.764628819135115,0,0.223874754722178,0.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| |||
|short_description=p5@SLC39A10 | |||
}} |
Latest revision as of 06:09, 19 September 2015
Short description: | p5@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC39A10_5end |
Coexpression cluster: | C1020_Mast_CD4_acute_chronic_CD8_thymus_Peripheral |
Association with transcript: | 0bp_to_ENST00000444421_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | F2Z341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.01e-19 | 53 |
common lymphoid progenitor | 1.01e-19 | 53 |
lymphoid lineage restricted progenitor cell | 8.59e-19 | 52 |
hematopoietic stem cell | 6.90e-18 | 168 |
hematopoietic cell | 1.50e-16 | 177 |
hematopoietic oligopotent progenitor cell | 1.51e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-15 | 161 |
leukocyte | 5.71e-15 | 136 |
mature alpha-beta T cell | 7.94e-15 | 18 |
alpha-beta T cell | 7.94e-15 | 18 |
immature T cell | 7.94e-15 | 18 |
mature T cell | 7.94e-15 | 18 |
immature alpha-beta T cell | 7.94e-15 | 18 |
nongranular leukocyte | 3.78e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 7.67e-12 | 120 |
T cell | 1.12e-10 | 25 |
pro-T cell | 1.12e-10 | 25 |
CD8-positive, alpha-beta T cell | 1.44e-10 | 11 |
B cell | 1.35e-09 | 14 |
lymphocyte of B lineage | 3.38e-07 | 24 |
pro-B cell | 3.38e-07 | 24 |
mast cell | 5.47e-07 | 5 |
basophil mast progenitor cell | 5.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 4.39e-08 | 22 |
neocortex | 7.03e-08 | 20 |
upper respiratory tract | 1.06e-07 | 19 |
larynx | 3.01e-07 | 9 |
blood | 3.20e-07 | 15 |
haemolymphatic fluid | 3.20e-07 | 15 |
organism substance | 3.20e-07 | 15 |