FFCP PHASE1:Hg19::chr9:139693833..139693853,+: Difference between revisions
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|id=chr9:139693833..139693853,+
|short_description=p10@KIAA1984
|description=CAGE_peak_10_at_KIAA1984_5end
|association_with_transcript=-13bp_to_ENST00000430612_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84960 | |EntrezGene=84960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28236 | |HGNC=28236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_ENST00000430612_5end | |||
|cluster_id=chr9:139693833..139693853,+ | |||
|coexpression_cluster_id=C1453 | |||
|description=CAGE_peak_10_at_KIAA1984_5end | |||
|id=chr9:139693833..139693853,+ | |||
|ontology_enrichment_celltype=CL:0002553!1.43e-10!1;CL:0002563!6.25e-10!4;CL:0000223!6.93e-09!59;CL:0000181!1.22e-07!12;CL:0000417!1.22e-07!12;CL:0000668!1.22e-07!12;CL:0000414!1.22e-07!12;CL:0000412!1.22e-07!12;CL:0000182!1.22e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.73e-25;12!CL:0002535;5.96e-18;2!CL:0002327;1.63e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.66e-25,12;CL:0002535,6.48e-18,2;CL:0002327,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;8.34e-34;1!UBERON:0004161;1.02e-27;11!UBERON:0009497;1.34e-23;13!UBERON:0001041;1.07e-10;30!UBERON:0003104;3.67e-10;31 | |||
|ontology_enrichment_disease=DOID:305!1.36e-14!106;DOID:0050687!7.32e-12!143 | |||
|ontology_enrichment_disease_v019=DOID:7;2.38e-13;39!DOID:5093;1.63e-09;4!DOID:1612;1.63e-09;4!DOID:4362;5.54e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.09e-14,39;DOID:5093,1.70e-09,4;DOID:1612,1.70e-09,4;DOID:305,3.05e-08,106;DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000059!1.40e-13!11;UBERON:0005409!1.31e-11!35;UBERON:0004921!2.28e-11!129;UBERON:0004185!2.28e-11!129;UBERON:0000160!3.01e-11!27;UBERON:0001052!4.35e-10!4;UBERON:0001242!6.25e-10!4;UBERON:0001262!6.25e-10!4;UBERON:0004786!6.25e-10!4;UBERON:0004808!6.25e-10!4;UBERON:0001277!6.25e-10!4;UBERON:0001155!1.08e-09!9;UBERON:0001007!4.42e-09!155;UBERON:0001555!4.42e-09!155;UBERON:0007026!4.42e-09!155;UBERON:0004907!3.05e-08!5;UBERON:0004119!3.87e-08!169;UBERON:0000925!3.87e-08!169;UBERON:0006595!3.87e-08!169;UBERON:0003350!4.07e-08!5;UBERON:0001046!9.60e-08!19;UBERON:0005911!1.00e-07!82;UBERON:0003929!1.55e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.96e-18;2!UBERON:0004801;5.96e-18;2!UBERON:0002365;1.18e-16;31!UBERON:0002330;1.18e-16;31!UBERON:0002107;1.99e-16;19!UBERON:0006925;1.99e-16;19!UBERON:0002423;1.11e-12;25!UBERON:0001052;1.63e-09;4!UBERON:0001911;1.63e-09;4!UBERON:0002368;4.25e-09;33!UBERON:0004907;7.25e-08;5!UBERON:0000949;3.49e-07;43!UBERON:0000002;7.37e-07;6!UBERON:0001560;7.37e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0002365,1.37e-17,31;UBERON:0002330,1.37e-17,31;UBERON:0002107,1.94e-16,19;UBERON:0006925,1.94e-16,19;UBERON:0008836,1.94e-16,19;UBERON:0008835,2.61e-14,22;UBERON:0003894,2.61e-14,22;UBERON:0009854,1.01e-13,23;UBERON:0007499,1.09e-12,25;UBERON:0009497,1.09e-12,25;UBERON:0000015,1.09e-12,25;UBERON:0002423,1.09e-12,25;UBERON:0006235,1.09e-12,25;UBERON:0004161,1.09e-12,25;UBERON:0009856,3.13e-12,26;UBERON:0001052,1.57e-09,4;UBERON:0002530,1.59e-09,59;UBERON:0001911,1.70e-09,4;UBERON:0005333,1.70e-09,4;UBERON:0008425,1.70e-09,4;UBERON:0005311,1.70e-09,4;UBERON:0002368,2.81e-09,35;UBERON:0004907,7.01e-08,5;UBERON:0000949,2.28e-07,45;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6 | |||
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|short_description=p10@KIAA1984 | |||
}} | }} |
Latest revision as of 13:24, 16 September 2015
Short description: | p10@KIAA1984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KIAA1984_5end |
Coexpression cluster: | C1453_argyrophil_hepatocellular_Intestinal_small_liver_hepatoblastoma_gastrointestinal |
Association with transcript: | -13bp_to_ENST00000430612_5end |
EntrezGene: | KIAA1984 |
HGNC: | 28236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.66e-25 | 12 |
epithelial cell of cervix | 6.48e-18 | 2 |
mammary gland epithelial cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
exocrine gland | 1.37e-17 | 31 |
exocrine system | 1.37e-17 | 31 |
liver | 1.94e-16 | 19 |
digestive gland | 1.94e-16 | 19 |
liver bud | 1.94e-16 | 19 |
hepatic diverticulum | 2.61e-14 | 22 |
liver primordium | 2.61e-14 | 22 |
digestive tract diverticulum | 1.01e-13 | 23 |
epithelial sac | 1.09e-12 | 25 |
epithelium of foregut-midgut junction | 1.09e-12 | 25 |
anatomical boundary | 1.09e-12 | 25 |
hepatobiliary system | 1.09e-12 | 25 |
foregut-midgut junction | 1.09e-12 | 25 |
septum transversum | 1.09e-12 | 25 |
sac | 3.13e-12 | 26 |
rectum | 1.57e-09 | 4 |
gland | 1.59e-09 | 59 |
mammary gland | 1.70e-09 | 4 |
mammary bud | 1.70e-09 | 4 |
mammary ridge | 1.70e-09 | 4 |
mammary placode | 1.70e-09 | 4 |
endocrine gland | 2.81e-09 | 35 |
lower digestive tract | 7.01e-08 | 5 |
endocrine system | 2.28e-07 | 45 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.09e-14 | 39 |
thoracic cancer | 1.70e-09 | 4 |
breast cancer | 1.70e-09 | 4 |
carcinoma | 3.05e-08 | 106 |
cervical cancer | 5.73e-08 | 5 |