FFCP PHASE1:Hg19::chr2:241906841..241906868,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200772 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000418218,NR_033841,uc002waf.2_5end | |||
|cluster_id=chr2:241906841..241906868,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_LOC200772_5end | |||
|id=chr2:241906841..241906868,- | |||
|ontology_enrichment_celltype=CL:0002057!9.60e-69!42;CL:0000860!3.07e-63!45;CL:0002194!1.08e-44!63;CL:0000576!1.08e-44!63;CL:0000040!1.08e-44!63;CL:0000559!1.08e-44!63;CL:0000766!1.74e-43!76;CL:0002009!6.48e-43!65;CL:0000839!6.49e-39!70;CL:0000557!3.50e-38!71;CL:0000763!9.34e-31!112;CL:0000049!9.34e-31!112;CL:0002087!8.34e-23!119;CL:0000738!5.46e-22!140;CL:0000037!5.71e-19!172;CL:0000566!5.71e-19!172;CL:0002393!9.30e-18!9;CL:0002397!9.30e-18!9;CL:0002031!1.29e-17!124;CL:0002032!3.51e-17!165;CL:0000837!3.51e-17!165;CL:0000988!4.42e-17!182;CL:0000875!1.30e-07!3;CL:0002396!1.30e-07!3;CL:0000767!2.60e-07!3;CL:0000842!2.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-55;33!CL:0002057;2.00e-55;33!CL:0000576;1.13e-45;48!CL:0000473;1.67e-37;39!CL:0000234;1.67e-37;39!CL:0000766;1.01e-26;69!CL:0000763;6.53e-15;100!CL:0002393;2.31e-13;6!CL:0002397;2.31e-13;6!CL:0002087;2.07e-11;104!CL:0000875;2.30e-11;3!CL:0002396;2.30e-11;3!CL:0000767;7.28e-11;3!CL:0000226;7.89e-11;3!CL:0000842;7.89e-11;3!CL:0000738;4.83e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.27e-82,42;CL:0002057,3.27e-82,42;CL:0000473,9.52e-71,48;CL:0000234,9.52e-71,48;CL:0000766,1.90e-55,72;CL:0002194,1.05e-54,59;CL:0000576,1.05e-54,59;CL:0000040,1.05e-54,59;CL:0000559,1.05e-54,59;CL:0002009,1.24e-52,61;CL:0000839,5.30e-48,66;CL:0000557,3.70e-47,67;CL:0000763,3.72e-38,108;CL:0000049,3.72e-38,108;CL:0000738,6.78e-32,136;CL:0002087,2.60e-31,115;CL:0000037,7.48e-27,168;CL:0000988,6.33e-25,177;CL:0002031,3.71e-24,120;CL:0002032,9.69e-24,161;CL:0000837,9.69e-24,161;CL:0002393,1.03e-22,9;CL:0002397,1.03e-22,9;CL:0000875,2.31e-11,3;CL:0002396,2.31e-11,3;CL:0000767,7.07e-11,3;CL:0000226,7.79e-11,3;CL:0000842,7.79e-11,3;CL:0000134,1.36e-09,354;CL:0002320,3.43e-09,361;CL:0000219,8.83e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-59;42!CL:0000049;7.94e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-46!102;UBERON:0003061!3.99e-46!102;UBERON:0002193!3.74e-42!112;UBERON:0002405!2.35e-33!115;UBERON:0002371!2.03e-32!80;UBERON:0001474!8.96e-31!86;UBERON:0004765!2.95e-24!101;UBERON:0001434!2.95e-24!101;UBERON:0003081!6.17e-14!216;UBERON:0000178!7.81e-14!15;UBERON:0000179!7.81e-14!15;UBERON:0000463!7.81e-14!15;UBERON:0002204!6.96e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.79e-12;15!UBERON:0000179;1.79e-12;15!UBERON:0000463;1.79e-12;15!UBERON:0002390;5.09e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.96e-53,98;UBERON:0003061,3.96e-53,98;UBERON:0002193,3.30e-47,108;UBERON:0002371,1.51e-40,76;UBERON:0001474,6.10e-37,82;UBERON:0002405,9.03e-36,93;UBERON:0004765,7.11e-33,90;UBERON:0001434,1.05e-28,100;UBERON:0003081,5.60e-20,203;UBERON:0002204,1.09e-13,167;UBERON:0000178,1.81e-12,15;UBERON:0000179,1.81e-12,15;UBERON:0000463,1.81e-12,15;UBERON:0000926,9.56e-10,315;UBERON:0004120,9.56e-10,315;UBERON:0006603,9.56e-10,315;UBERON:0002384,1.21e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04737836752479,3.83829398097213,8.05043841243595,0,0,0,0,0,0,1.66198622559563,0.401088894940283,1.51907609501096,0.223915474239924,0.32389366601898,0,1.01778767145695,1.88937971844405,3.15359279544161,2.09186133215116,2.46700732813095,2.16794459626573,2.3015391385772,2.30544635876191,1.89185783910868,1.37898272294647,0.645484683583826,1.35426486594342,0.752969358170419,1.91034305040492,2.47195832889593,2.44867113896722,0.962787081228281,4.47535988059329,2.63881040149373,1.79517291859469,2.55734850319616,1.16083695451434,1.13477044938228,3.11411124497787,2.26123798731069,2.08593167368081,4.99534342821768,1.21079900526674,1.10483290796269,2.53169909952708,10.3515090292851,23.8116815960849,7.54771123830153,0.112328631146495,0,0.16072558669708,75.8133898351721,91.7005881887805,62.2884764337402,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13536052245775,8.84428223356329,4.802740101155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,2.02979043692868,0.764637207142375,2.27858874869665,2.85878130549347,0.411362273086194,0.648473311192717,1.62009431171434,3.17250070517708,0,0,0,0,0,0,0,0,0,2.54008299268659,0,0,0,0,0,0,0,0,20.4406194091357,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,11.9244421176902,0,0,0.890894042497916,0,0,0,0,0,0.63337622438398,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.997270091400938,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,1.55022605855557,0,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,1.64831716762333,1.81989568406299,0.196854963029498,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,5.30027555648885,0,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6150023051816,4.10437490686353,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96300467230486,0,0,0,0,4.37139893753226,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,1.69171052363736,1.86927875123374,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.471464371102113,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@LOC200772 | |||
}} |
Latest revision as of 09:12, 16 September 2015
Short description: | p1@LOC200772 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC200772_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000418218, NR_033841, uc002waf.2_5end |
EntrezGene: | LOC200772 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.96e-53 | 98 |
blood island | 3.96e-53 | 98 |
hemolymphoid system | 3.30e-47 | 108 |
bone marrow | 1.51e-40 | 76 |
bone element | 6.10e-37 | 82 |
immune system | 9.03e-36 | 93 |
skeletal element | 7.11e-33 | 90 |
skeletal system | 1.05e-28 | 100 |
lateral plate mesoderm | 5.60e-20 | 203 |
musculoskeletal system | 1.09e-13 | 167 |
blood | 1.81e-12 | 15 |
haemolymphatic fluid | 1.81e-12 | 15 |
organism substance | 1.81e-12 | 15 |
mesoderm | 9.56e-10 | 315 |
mesoderm-derived structure | 9.56e-10 | 315 |
presumptive mesoderm | 9.56e-10 | 315 |
connective tissue | 1.21e-08 | 371 |