FFCP PHASE1:Mm9::chr11:23670933..23670942,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19696|HGNC=|MCL_coexpression_id=7|UniProt=A4QPD3|association_with_transcript=27bp_to_ENSMUST00000102864,NM_009044,uc007ifo.1_5end|description=CAGE_peak_4_at_Rel_5end|id=chr11:23670933..23670942,-|ontology_enrichment_celltype=CL:0000988!8.88e-11!32;CL:0002032!8.88e-11!32;CL:0000037!8.88e-11!32;CL:0000566!8.88e-11!32;CL:0000837!8.88e-11!32;CL:0000791!5.21e-09!9;CL:0000789!5.21e-09!9;CL:0002420!5.21e-09!9;CL:0002419!5.21e-09!9;CL:0000790!5.21e-09!9;CL:0000838!7.18e-09!12;CL:0000063!1.12e-08!66;CL:0000624!3.73e-08!8;CL:0000542!6.75e-08!13;CL:0000051!6.75e-08!13;CL:0000084!6.77e-08!11;CL:0000827!6.77e-08!11;CL:0002320!9.69e-08!46;CL:0000134!9.69e-08!46;CL:0002031!4.50e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,4.82e-25,32;CL:0002032,4.82e-25,32;CL:0000037,4.82e-25,32;CL:0000837,4.82e-25,32;CL:0000791,6.52e-21,9;CL:0000789,6.52e-21,9;CL:0002420,6.52e-21,9;CL:0002419,6.52e-21,9;CL:0000790,6.52e-21,9;CL:0000838,2.34e-20,12;CL:0002320,4.66e-19,46;CL:0000134,4.66e-19,46;CL:0000542,1.04e-18,13;CL:0000051,1.04e-18,13;CL:0000624,9.53e-18,8;CL:0002031,1.83e-17,25;CL:0000084,5.74e-17,11;CL:0000827,5.74e-17,11;CL:0000219,8.26e-16,54;CL:0000738,4.79e-14,17;CL:0002087,4.79e-14,17;CL:0000034,1.76e-11,97;CL:0000893,3.29e-11,6;CL:0002489,3.29e-11,6;CL:0000898,3.29e-11,6;CL:0000809,3.29e-11,6;CL:0000810,3.29e-11,6;CL:0000895,3.29e-11,6;CL:0000808,3.29e-11,6;CL:0000894,3.29e-11,6;CL:0000806,3.29e-11,6;CL:0000807,3.29e-11,6;CL:0000805,3.29e-11,6;CL:0002425,3.29e-11,6;CL:0002436,3.29e-11,6;CL:0002427,3.29e-11,6;CL:0002428,3.29e-11,6;CL:0002429,3.29e-11,6;CL:0002433,3.29e-11,6;CL:0002431,3.29e-11,6;CL:0002432,3.29e-11,6;CL:0000049,3.50e-09,19;CL:0000723,3.39e-08,91;CL:0000048,3.39e-08,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.69e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.66e-19,46|phase1_expression=0,0,1.36499771816861,0.60492842261366,0.500895729946347,0.671517087647559,0,1.03298658753261,48.8536865866284,57.1117444225664,2.22583358693156,2.15384829287408,0.171200729931206,0.437102012094987,0.666219523631325,0.607425802169478,0,1.41957974411207,2.19383093769182,3.39511721438424,0,0.0992909512008853,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0,0.125896817975577,0,0,0,0,0,0,0,0,22.1473039996212,5.07753499407941,1.34437519656986,0,0,0,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,2.99537811264801,0.599902730993408,1.90605340609597,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.70498099637356,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.730999937126662,0.219550115291051,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0.410082683163076,0.686334519619568,2.54967644990783,3.07893195112048,2.9021994498929,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.302899349844443,0,0,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0,0,0,0,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0.309873682371932,0,0,0,0,0,0,0|short_description=p4@Rel}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19696 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=A4QPD3 | |||
|association_with_transcript=27bp_to_ENSMUST00000102864,NM_009044,uc007ifo.1_5end | |||
|cluster_id=chr11:23670933..23670942,- | |||
|description=CAGE_peak_4_at_Rel_5end | |||
|id=chr11:23670933..23670942,- | |||
|ontology_enrichment_celltype=CL:0000988!8.88e-11!32;CL:0002032!8.88e-11!32;CL:0000037!8.88e-11!32;CL:0000566!8.88e-11!32;CL:0000837!8.88e-11!32;CL:0000791!5.21e-09!9;CL:0000789!5.21e-09!9;CL:0002420!5.21e-09!9;CL:0002419!5.21e-09!9;CL:0000790!5.21e-09!9;CL:0000838!7.18e-09!12;CL:0000063!1.12e-08!66;CL:0000624!3.73e-08!8;CL:0000542!6.75e-08!13;CL:0000051!6.75e-08!13;CL:0000084!6.77e-08!11;CL:0000827!6.77e-08!11;CL:0002320!9.69e-08!46;CL:0000134!9.69e-08!46;CL:0002031!4.50e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.82e-25,32;CL:0002032,4.82e-25,32;CL:0000037,4.82e-25,32;CL:0000837,4.82e-25,32;CL:0000791,6.52e-21,9;CL:0000789,6.52e-21,9;CL:0002420,6.52e-21,9;CL:0002419,6.52e-21,9;CL:0000790,6.52e-21,9;CL:0000838,2.34e-20,12;CL:0002320,4.66e-19,46;CL:0000134,4.66e-19,46;CL:0000542,1.04e-18,13;CL:0000051,1.04e-18,13;CL:0000624,9.53e-18,8;CL:0002031,1.83e-17,25;CL:0000084,5.74e-17,11;CL:0000827,5.74e-17,11;CL:0000219,8.26e-16,54;CL:0000738,4.79e-14,17;CL:0002087,4.79e-14,17;CL:0000034,1.76e-11,97;CL:0000893,3.29e-11,6;CL:0002489,3.29e-11,6;CL:0000898,3.29e-11,6;CL:0000809,3.29e-11,6;CL:0000810,3.29e-11,6;CL:0000895,3.29e-11,6;CL:0000808,3.29e-11,6;CL:0000894,3.29e-11,6;CL:0000806,3.29e-11,6;CL:0000807,3.29e-11,6;CL:0000805,3.29e-11,6;CL:0002425,3.29e-11,6;CL:0002436,3.29e-11,6;CL:0002427,3.29e-11,6;CL:0002428,3.29e-11,6;CL:0002429,3.29e-11,6;CL:0002433,3.29e-11,6;CL:0002431,3.29e-11,6;CL:0002432,3.29e-11,6;CL:0000049,3.50e-09,19;CL:0000723,3.39e-08,91;CL:0000048,3.39e-08,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.69e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.66e-19,46 | |||
|phase1_expression=0,0,1.36499771816861,0.60492842261366,0.500895729946347,0.671517087647559,0,1.03298658753261,48.8536865866284,57.1117444225664,2.22583358693156,2.15384829287408,0.171200729931206,0.437102012094987,0.666219523631325,0.607425802169478,0,1.41957974411207,2.19383093769182,3.39511721438424,0,0.0992909512008853,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0,0.125896817975577,0,0,0,0,0,0,0,0,22.1473039996212,5.07753499407941,1.34437519656986,0,0,0,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,2.99537811264801,0.599902730993408,1.90605340609597,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.02939162845886,1.70498099637356,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0.730999937126662,0.219550115291051,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0.50925170356284,0,0,0,1.43768206527355,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0.410082683163076,0.686334519619568,2.54967644990783,3.07893195112048,2.9021994498929,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0.147689527174577,0.302899349844443,0,0,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0,0,0,0,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p4@Rel | |||
}} |
Latest revision as of 05:51, 27 September 2015
Short description: | p4@Rel |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rel_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 27bp_to_ENSMUST00000102864, NM_009044, uc007ifo.1_5end |
EntrezGene: | Rel |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.66e-19 | 46 |