FFCP PHASE1:Hg19::chr9:25677970..25678008,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:25677970..25678008,-
|short_description=p3@TUSC1
|description=CAGE_peak_3_at_TUSC1_5end
|association_with_transcript=-18bp_to_BC028316_5end
|EntrezGene=28...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286319 | |EntrezGene=286319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31010 | |HGNC=31010 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TAM9 | |UniProt=Q2TAM9 | ||
|association_with_transcript=-18bp_to_BC028316_5end | |||
|cluster_id=chr9:25677970..25678008,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_TUSC1_5end | |||
|id=chr9:25677970..25678008,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;6.30e-21;2!CL:1000500;6.30e-21;2!CL:1000618;6.30e-21;2!CL:1001318;6.30e-21;2!CL:0002173;6.30e-21;2!CL:0000669;3.60e-11;4!CL:1000746;6.21e-07;7!CL:1000612;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,6.96e-21,2;CL:1000500,6.96e-21,2;CL:1000618,6.96e-21,2;CL:1001318,6.96e-21,2;CL:0002173,6.96e-21,2;CL:0000669,3.79e-11,4;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;6.30e-21;2!UBERON:0003838;6.30e-21;2!UBERON:0003586;6.30e-21;2!UBERON:0005169;6.30e-21;2!UBERON:0002321;6.30e-21;2!UBERON:0005215;6.30e-21;2!UBERON:0002303;6.30e-21;2!UBERON:0002319;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0003891;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0000074;6.21e-07;7!UBERON:0001229;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003567,6.96e-21,2;UBERON:0003838,6.96e-21,2;UBERON:0003586,6.96e-21,2;UBERON:0005169,6.96e-21,2;UBERON:0002321,6.96e-21,2;UBERON:0005215,6.96e-21,2;UBERON:0002303,6.96e-21,2;UBERON:0002319,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0003891,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0003886,2.08e-07,54;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7 | |||
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| ||
|short_description=p3@TUSC1 | |||
}} | }} |
Latest revision as of 00:19, 17 September 2015
Short description: | p3@TUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TUSC1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -18bp_to_BC028316_5end |
EntrezGene: | TUSC1 |
HGNC: | 31010 |
UniProt: | Q2TAM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 6.96e-21 | 2 |
kidney interstitial cell | 6.96e-21 | 2 |
juxtaglomerular complex cell | 6.96e-21 | 2 |
renal interstitial pericyte | 6.96e-21 | 2 |
extraglomerular mesangial cell | 6.96e-21 | 2 |
pericyte cell | 3.79e-11 | 4 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
abdomen connective tissue | 6.96e-21 | 2 |
abdominal segment connective tissue | 6.96e-21 | 2 |
trunk connective tissue | 6.96e-21 | 2 |
interstitial tissue | 6.96e-21 | 2 |
extraglomerular mesangium | 6.96e-21 | 2 |
kidney interstitium | 6.96e-21 | 2 |
juxtaglomerular apparatus | 6.96e-21 | 2 |
mesangium | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
stroma | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
body cavity precursor | 2.08e-07 | 54 |
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |