FFCP PHASE1:Hg19::chr2:71047727..71047733,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25357 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N1N0 | |||
|association_with_transcript=0bp_to_ENST00000272367,NM_173535,uc002shf.2,uc010yqv.1_5end | |||
|cluster_id=chr2:71047727..71047733,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_1_at_CLEC4F_5end | |||
|id=chr2:71047727..71047733,- | |||
|ontology_enrichment_celltype=CL:0002057!8.20e-37!42;CL:0000860!8.89e-34!45;CL:0002009!1.52e-25!65;CL:0002194!1.48e-24!63;CL:0000576!1.48e-24!63;CL:0000040!1.48e-24!63;CL:0000559!1.48e-24!63;CL:0000557!1.20e-22!71;CL:0000766!5.51e-22!76;CL:0000839!2.92e-21!70;CL:0000738!1.10e-19!140;CL:0002087!1.81e-18!119;CL:0000763!1.19e-16!112;CL:0000049!1.19e-16!112;CL:0002031!4.21e-15!124;CL:0000037!9.95e-15!172;CL:0000566!9.95e-15!172;CL:0000988!2.82e-13!182;CL:0002032!5.18e-13!165;CL:0000837!5.18e-13!165;CL:0002393!1.26e-12!9;CL:0002397!1.26e-12!9;CL:0000875!2.83e-08!3;CL:0002396!2.83e-08!3;CL:0000842!1.40e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-22;33!CL:0002057;1.16e-22;33!CL:0000576;3.31e-22;48!CL:0000473;7.06e-17;39!CL:0000234;7.06e-17;39!CL:0000766;9.75e-12;69!CL:0000875;2.60e-11;3!CL:0002396;2.60e-11;3!CL:0000453;8.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.90e-37,42;CL:0002057,3.90e-37,42;CL:0000473,3.78e-32,48;CL:0000234,3.78e-32,48;CL:0002009,8.48e-28,61;CL:0002194,3.66e-25,59;CL:0000576,3.66e-25,59;CL:0000040,3.66e-25,59;CL:0000559,3.66e-25,59;CL:0000557,4.41e-25,67;CL:0000839,3.05e-22,66;CL:0000766,3.49e-20,72;CL:0000763,1.57e-16,108;CL:0000049,1.57e-16,108;CL:0000738,3.73e-16,136;CL:0002087,1.86e-15,115;CL:0002031,1.13e-14,120;CL:0002393,4.58e-14,9;CL:0002397,4.58e-14,9;CL:0000037,2.03e-12,168;CL:0000988,1.31e-11,177;CL:0002032,1.51e-11,161;CL:0000837,1.51e-11,161;CL:0000875,2.29e-11,3;CL:0002396,2.29e-11,3;CL:0000453,9.18e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.07e-22;42!UBERON:0006242;1.53e-08;1!CL:0000049;5.79e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.53e-25!102;UBERON:0003061!7.53e-25!102;UBERON:0002193!5.78e-23!112;UBERON:0002405!2.33e-19!115;UBERON:0002371!3.98e-19!80;UBERON:0001474!3.39e-17!86;UBERON:0004765!2.13e-13!101;UBERON:0001434!2.13e-13!101;UBERON:0003081!2.52e-09!216;UBERON:0006947!1.95e-07!3;UBERON:0004054!1.95e-07!3;UBERON:0007023!3.62e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;8.36e-09;1!UBERON:0006518;8.36e-09;1!UBERON:0008949;8.36e-09;1!UBERON:0000101;8.36e-09;1!UBERON:0002167;8.36e-09;1!UBERON:0001000;1.53e-08;1!UBERON:0005352;1.53e-08;1!UBERON:0002108;8.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.45e-22,76;UBERON:0002390,4.52e-21,98;UBERON:0003061,4.52e-21,98;UBERON:0001474,5.25e-20,82;UBERON:0002405,9.75e-20,93;UBERON:0002193,7.91e-19,108;UBERON:0004765,5.54e-18,90;UBERON:0001434,6.66e-16,100;UBERON:0002204,1.36e-09,167;UBERON:0002171,8.36e-09,1;UBERON:0006518,8.36e-09,1;UBERON:0008949,8.36e-09,1;UBERON:0000101,8.36e-09,1;UBERON:0002167,8.36e-09,1;UBERON:0001000,1.78e-08,1;UBERON:0005352,1.78e-08,1;UBERON:0003081,1.78e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.581592955118259,0,1.4555043671269,0.232429036905685,0,0.619412741790207,1.1507695692886,0.256160706529101,3.31075121844019,1.37898272294647,0,1.35426486594342,0.564727018627814,0,0.224723484445085,1.53041946185451,0,0,2.30895910130701,0.199463657621632,4.26224750532694,0.290209238628584,0.56738522469114,0,3.26623264833766,0.521482918420201,3.04064382587163,0,0,0,4.64761629886272,34.8671051942671,0.838634582033504,0,1.20141514273205,0,3.70516566863623,60.8685032229216,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,36.7512639525674,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,3.05515072466813,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,1.18375320854817,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0.943225830597996,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,0,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00326405540328,0.874238242015829,0,0,0,0,0,0,0,0.281951753939561,2.32048396704878,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0.129177819672012,0.186224142887574,0,0,0.202117188958219,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p1@CLEC4F | |||
}} |
Latest revision as of 07:05, 18 September 2015
Short description: | p1@CLEC4F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLEC4F_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 0bp_to_ENST00000272367, NM_173535, uc002shf.2, uc010yqv.1_5end |
EntrezGene: | CLEC4F |
HGNC: | 25357 |
UniProt: | Q8N1N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.90e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.90e-37 | 42 |
defensive cell | 3.78e-32 | 48 |
phagocyte | 3.78e-32 | 48 |
macrophage dendritic cell progenitor | 8.48e-28 | 61 |
monopoietic cell | 3.66e-25 | 59 |
monocyte | 3.66e-25 | 59 |
monoblast | 3.66e-25 | 59 |
promonocyte | 3.66e-25 | 59 |
granulocyte monocyte progenitor cell | 4.41e-25 | 67 |
myeloid lineage restricted progenitor cell | 3.05e-22 | 66 |
myeloid leukocyte | 3.49e-20 | 72 |
myeloid cell | 1.57e-16 | 108 |
common myeloid progenitor | 1.57e-16 | 108 |
leukocyte | 3.73e-16 | 136 |
nongranular leukocyte | 1.86e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.13e-14 | 120 |
intermediate monocyte | 4.58e-14 | 9 |
CD14-positive, CD16-positive monocyte | 4.58e-14 | 9 |
hematopoietic stem cell | 2.03e-12 | 168 |
hematopoietic cell | 1.31e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.51e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-11 | 161 |
non-classical monocyte | 2.29e-11 | 3 |
CD14-low, CD16-positive monocyte | 2.29e-11 | 3 |
Langerhans cell | 9.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.45e-22 | 76 |
hematopoietic system | 4.52e-21 | 98 |
blood island | 4.52e-21 | 98 |
bone element | 5.25e-20 | 82 |
immune system | 9.75e-20 | 93 |
hemolymphoid system | 7.91e-19 | 108 |
skeletal element | 5.54e-18 | 90 |
skeletal system | 6.66e-16 | 100 |
musculoskeletal system | 1.36e-09 | 167 |
lower lobe of right lung | 8.36e-09 | 1 |
right lung lobe | 8.36e-09 | 1 |
lower lobe of lung | 8.36e-09 | 1 |
lobe of lung | 8.36e-09 | 1 |
right lung | 8.36e-09 | 1 |
vas deferens | 1.78e-08 | 1 |
spermatic cord | 1.78e-08 | 1 |
lateral plate mesoderm | 1.78e-08 | 203 |