FFCP PHASE1:Hg19::chr9:34126624..34126657,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:34126624..34126657,-
|short_description=p2@DCAF12
|description=CAGE_peak_2_at_DCAF12_5end
|association_with_transcript=113bp_to_ENST00000361264,NM_015397,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25853 | |EntrezGene=25853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19911 | |HGNC=19911 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T6F0 | |UniProt=Q5T6F0 | ||
|association_with_transcript=113bp_to_ENST00000361264,NM_015397,uc003ztt.2_5end | |||
|cluster_id=chr9:34126624..34126657,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_DCAF12_5end | |||
|id=chr9:34126624..34126657,- | |||
|ontology_enrichment_celltype=CL:0000763!3.06e-17!112;CL:0000049!3.06e-17!112;CL:0000839!5.47e-16!70;CL:0000557!1.35e-14!71;CL:0000766!1.74e-14!76;CL:0000988!2.38e-14!182;CL:0002009!3.92e-14!65;CL:0002194!6.08e-14!63;CL:0000576!6.08e-14!63;CL:0000040!6.08e-14!63;CL:0000559!6.08e-14!63;CL:0000037!1.31e-13!172;CL:0000566!1.31e-13!172;CL:0002032!1.48e-12!165;CL:0000837!1.48e-12!165;CL:0002031!5.18e-10!124;CL:0002057!1.16e-09!42;CL:0000860!5.17e-09!45;CL:0000738!7.44e-09!140;CL:0002087!3.12e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.82e-09;39!CL:0000234;3.82e-09;39!CL:0000576;4.33e-09;48!CL:0000766;4.14e-08;69!CL:0000860;6.24e-08;33!CL:0002057;6.24e-08;33!CL:0000763;1.24e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.81e-18,108;CL:0000049,1.81e-18,108;CL:0000839,1.14e-17,66;CL:0000557,3.85e-16,67;CL:0000766,6.04e-16,72;CL:0002009,9.47e-16,61;CL:0002194,1.39e-15,59;CL:0000576,1.39e-15,59;CL:0000040,1.39e-15,59;CL:0000559,1.39e-15,59;CL:0000988,7.09e-15,177;CL:0000037,2.28e-14,168;CL:0002032,2.71e-13,161;CL:0000837,2.71e-13,161;CL:0000473,1.02e-12,48;CL:0000234,1.02e-12,48;CL:0002031,8.85e-11,120;CL:0000860,1.16e-09,42;CL:0002057,1.16e-09,42;CL:0000738,1.70e-09,136;CL:0002087,6.50e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.62e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!1.13e-10!51;DOID:0060083!1.13e-10!51;DOID:1240!9.02e-09!39;DOID:8692!5.43e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.46e-07;39!DOID:8692;9.03e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.13e-10,51;DOID:0060083,1.13e-10,51;DOID:1240,9.02e-09,39;DOID:8692,5.43e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.36e-17!112;UBERON:0002390!1.37e-17!102;UBERON:0003061!1.37e-17!102;UBERON:0002371!1.50e-12!80;UBERON:0002405!6.62e-12!115;UBERON:0001474!1.79e-11!86;UBERON:0003081!2.47e-09!216;UBERON:0004765!2.42e-08!101;UBERON:0001434!2.42e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.14e-19,98;UBERON:0003061,6.14e-19,98;UBERON:0002193,7.56e-19,108;UBERON:0002405,1.50e-14,93;UBERON:0002371,8.45e-14,76;UBERON:0001474,1.41e-12,82;UBERON:0004765,1.16e-10,90;UBERON:0003081,6.39e-10,203;UBERON:0001434,6.24e-09,100 | |||
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| ||
|short_description=p2@DCAF12 | |||
}} | }} |
Latest revision as of 04:47, 17 September 2015
Short description: | p2@DCAF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DCAF12_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 113bp_to_ENST00000361264, NM_015397, uc003ztt.2_5end |
EntrezGene: | DCAF12 |
HGNC: | 19911 |
UniProt: | Q5T6F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.81e-18 | 108 |
common myeloid progenitor | 1.81e-18 | 108 |
myeloid lineage restricted progenitor cell | 1.14e-17 | 66 |
granulocyte monocyte progenitor cell | 3.85e-16 | 67 |
myeloid leukocyte | 6.04e-16 | 72 |
macrophage dendritic cell progenitor | 9.47e-16 | 61 |
monopoietic cell | 1.39e-15 | 59 |
monocyte | 1.39e-15 | 59 |
monoblast | 1.39e-15 | 59 |
promonocyte | 1.39e-15 | 59 |
hematopoietic cell | 7.09e-15 | 177 |
hematopoietic stem cell | 2.28e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.71e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.71e-13 | 161 |
defensive cell | 1.02e-12 | 48 |
phagocyte | 1.02e-12 | 48 |
hematopoietic lineage restricted progenitor cell | 8.85e-11 | 120 |
classical monocyte | 1.16e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.16e-09 | 42 |
leukocyte | 1.70e-09 | 136 |
nongranular leukocyte | 6.50e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.14e-19 | 98 |
blood island | 6.14e-19 | 98 |
hemolymphoid system | 7.56e-19 | 108 |
immune system | 1.50e-14 | 93 |
bone marrow | 8.45e-14 | 76 |
bone element | 1.41e-12 | 82 |
skeletal element | 1.16e-10 | 90 |
lateral plate mesoderm | 6.39e-10 | 203 |
skeletal system | 6.24e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.13e-10 | 51 |
immune system cancer | 1.13e-10 | 51 |
leukemia | 9.02e-09 | 39 |
myeloid leukemia | 5.43e-07 | 31 |