FFCP PHASE1:Hg19::chr2:99388276..99388311,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=231bp_to_ENST00000448595_5end | |||
|cluster_id=chr2:99388276..99388311,- | |||
|coexpression_cluster_id=C726 | |||
|description=CAGE_peak_3_at_ENST00000448595_5end | |||
|id=chr2:99388276..99388311,- | |||
|ontology_enrichment_celltype=CL:0000791!4.27e-29!18;CL:0000789!4.27e-29!18;CL:0002420!4.27e-29!18;CL:0002419!4.27e-29!18;CL:0000790!4.27e-29!18;CL:0000084!2.13e-27!25;CL:0000827!2.13e-27!25;CL:0000625!7.63e-19!11;CL:0002087!6.50e-16!119;CL:0000738!4.84e-15!140;CL:0000838!1.99e-14!52;CL:0000542!5.20e-14!53;CL:0000051!5.20e-14!53;CL:0000037!1.49e-12!172;CL:0000566!1.49e-12!172;CL:0002031!3.58e-12!124;CL:0000988!4.29e-11!182;CL:0000624!1.35e-10!6;CL:0002032!5.38e-10!165;CL:0000837!5.38e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.20e-34;25!CL:0000791;7.49e-30;18!CL:0000789;7.49e-30;18!CL:0002419;7.49e-30;18!CL:0000625;6.46e-27;11!CL:0002619;1.95e-15;3!CL:0000542;4.40e-08;53!CL:0000624;1.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.99e-34,25;CL:0000827,1.99e-34,25;CL:0000791,4.26e-30,18;CL:0000789,4.26e-30,18;CL:0002420,4.26e-30,18;CL:0002419,4.26e-30,18;CL:0000790,4.26e-30,18;CL:0000625,4.08e-27,11;CL:0002619,2.67e-15,3;CL:0000838,6.23e-15,52;CL:0000542,1.36e-14,53;CL:0000051,1.36e-14,53;CL:0002087,9.97e-12,115;CL:0000738,1.85e-10,136;CL:0002031,7.58e-10,120;CL:0000037,1.37e-08,168;CL:0000988,6.50e-08,177;CL:0000624,1.53e-07,6;CL:0002032,3.20e-07,161;CL:0000837,3.20e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;7.49e-30;18!CL:0000051;4.40e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-20!115;UBERON:0002308!8.82e-12!9;UBERON:0000125!8.82e-12!9;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0009663!1.38e-09!7;UBERON:0000178!1.83e-09!15;UBERON:0000179!1.83e-09!15;UBERON:0000463!1.83e-09!15;UBERON:0002420!2.17e-09!9;UBERON:0007245!2.17e-09!9;UBERON:0010009!2.17e-09!9;UBERON:0010011!2.17e-09!9;UBERON:0000454!2.17e-09!9;UBERON:0002616!5.15e-09!59;UBERON:0002020!1.04e-08!34;UBERON:0003528!1.04e-08!34;UBERON:0002780!2.11e-08!41;UBERON:0001890!2.11e-08!41;UBERON:0006240!2.11e-08!41;UBERON:0002390!2.83e-08!102;UBERON:0003061!2.83e-08!102;UBERON:0002193!3.64e-08!112;UBERON:0003080!4.26e-08!42;UBERON:0001017!5.81e-08!82;UBERON:0002791!7.11e-08!33;UBERON:0002370!1.19e-07!4;UBERON:0005058!1.19e-07!4;UBERON:0009113!1.19e-07!4;UBERON:0003295!1.19e-07!4;UBERON:0005562!1.19e-07!4;UBERON:0001893!1.54e-07!34;UBERON:0000955!2.19e-07!69;UBERON:0006238!2.19e-07!69;UBERON:0005743!2.80e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.92e-10;2!UBERON:0005058;3.92e-10;2!UBERON:0009113;3.92e-10;2!UBERON:0000178;2.72e-07;15!UBERON:0000179;2.72e-07;15!UBERON:0000463;2.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.48e-11,4;UBERON:0005058,4.48e-11,4;UBERON:0009113,4.48e-11,4;UBERON:0003295,4.48e-11,4;UBERON:0005562,4.48e-11,4;UBERON:0003351,1.57e-07,6;UBERON:0000178,2.68e-07,15;UBERON:0000179,2.68e-07,15;UBERON:0000463,2.68e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,3.35873211359887,4.85840499028469,2.06060454107349,0,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0.398927315243264,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,2.35806457649499,0.822405995998037,2.34061093546949,0.651844533267181,0.473447805734733,0,3.11949279278486,0.883817722424512,0.886135578334485,0.812411591295047,2.17755243533648,2.21100890851793,2.13769275984779,2.21080014228679,4.92665245749589,2.96573126324121,3.47803076516627,1.04535523804977,3.17266159553185,2.68254345521345,3.09264700934367,2.78321661221453,3.50421955756506,2.60433381542567,2.85135613334512,3.312652619711,2.68771883424279,4.99722906209383,4.02521328474829,0.821127996921047,0.403213486449465,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51128545716063,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,2.29391162142713,1.13929437434833,1.90585420366231,0.411362273086194,0.648473311192717,0,1.58625035258854,0,0,0,0,0,2.41882267384608,1.11598390910176,0,0.383010740264733,0,0,0,0,0.156679895773023,0,0,0,0,0,0.687010689511529,0,0,0,3.12620952643264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,19.4167266571899,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.205116364240755,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0.23806443146374,1.80848947540817,2.23468971465088,0,0,0,0,0,0.471464371102113,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p3@ENST00000448595 | |||
}} |
Latest revision as of 13:32, 29 July 2015
Short description: | p3@ENST00000448595 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000448595_5end |
Coexpression cluster: | C726_chronic_CD4_Hodgkin_CD8_thymus_CD19_blood |
Association with transcript: | 231bp_to_ENST00000448595_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.99e-34 | 25 |
pro-T cell | 1.99e-34 | 25 |
mature alpha-beta T cell | 4.26e-30 | 18 |
alpha-beta T cell | 4.26e-30 | 18 |
immature T cell | 4.26e-30 | 18 |
mature T cell | 4.26e-30 | 18 |
immature alpha-beta T cell | 4.26e-30 | 18 |
CD8-positive, alpha-beta T cell | 4.08e-27 | 11 |
adult endothelial progenitor cell | 2.67e-15 | 3 |
lymphoid lineage restricted progenitor cell | 6.23e-15 | 52 |
lymphocyte | 1.36e-14 | 53 |
common lymphoid progenitor | 1.36e-14 | 53 |
nongranular leukocyte | 9.97e-12 | 115 |
leukocyte | 1.85e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 7.58e-10 | 120 |
hematopoietic stem cell | 1.37e-08 | 168 |
hematopoietic cell | 6.50e-08 | 177 |
CD4-positive, alpha-beta T cell | 1.53e-07 | 6 |
hematopoietic oligopotent progenitor cell | 3.20e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.48e-11 | 4 |
hemolymphoid system gland | 4.48e-11 | 4 |
thymic region | 4.48e-11 | 4 |
pharyngeal gland | 4.48e-11 | 4 |
thymus primordium | 4.48e-11 | 4 |
pharyngeal epithelium | 1.57e-07 | 6 |
blood | 2.68e-07 | 15 |
haemolymphatic fluid | 2.68e-07 | 15 |
organism substance | 2.68e-07 | 15 |