FFCP PHASE1:Mm9::chr13:42396981..42396995,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13614|HGNC=|MCL_coexpression_id=26|UniProt=P22387,Q544E0|association_with_transcript=342bp_to_ENSMUST00000021796,NM_010104,uc007qfl.2_5end|description=CAGE_peak_1_at_Edn1_5end|id=chr13:42396981..42396995,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.44e-09!23;UBERON:0001009!1.44e-09!23;UBERON:0005178!3.40e-09!17;UBERON:0005181!3.40e-09!17;UBERON:0002224!3.40e-09!17;UBERON:0000915!3.40e-09!17;UBERON:0008947!3.40e-09!17;UBERON:0003258!3.40e-09!17;UBERON:0007100!2.93e-07!18;UBERON:0000948!2.93e-07!18;UBERON:0005498!2.93e-07!18;UBERON:0004140!2.93e-07!18;UBERON:0009881!2.93e-07!18;UBERON:0004141!2.93e-07!18;UBERON:0003084!2.93e-07!18;UBERON:0007005!2.93e-07!18;UBERON:0004139!2.93e-07!18;UBERON:0004291!2.93e-07!18;UBERON:0002048!3.41e-07!14;UBERON:0000117!3.41e-07!14;UBERON:0000171!3.41e-07!14;UBERON:0000170!3.41e-07!14;UBERON:0005597!3.41e-07!14;UBERON:0000118!3.41e-07!14;UBERON:0000464!5.55e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.17e-09,23;UBERON:0001009,1.17e-09,23;UBERON:0005178,2.78e-09,17;UBERON:0005181,2.78e-09,17;UBERON:0002224,2.78e-09,17;UBERON:0000915,2.78e-09,17;UBERON:0008947,2.78e-09,17;UBERON:0003258,2.78e-09,17;UBERON:0007100,2.52e-07,18;UBERON:0000948,2.52e-07,18;UBERON:0005498,2.52e-07,18;UBERON:0004140,2.52e-07,18;UBERON:0009881,2.52e-07,18;UBERON:0004141,2.52e-07,18;UBERON:0003084,2.52e-07,18;UBERON:0007005,2.52e-07,18;UBERON:0004139,2.52e-07,18;UBERON:0004291,2.52e-07,18;UBERON:0002048,2.94e-07,14;UBERON:0000117,2.94e-07,14;UBERON:0000171,2.94e-07,14;UBERON:0000170,2.94e-07,14;UBERON:0005597,2.94e-07,14;UBERON:0000118,2.94e-07,14|phase1_expression=0,5.58360652222978,15.4699741392442,17.2404600444893,40.0716583957078,27.364321321638,44.8536269943409,0,0.84473233291,0.936258105287974,0,0,0,0,0,0.202475267389826,0,0,0,0,15.818051968099,0,0,2.3998863419011,2.52350209173887,7.46501553349526,10.7690499039769,12.7128027284675,8.55105387553682,0.504060259519861,0.221730510655305,0,0,0,13.5760261283099,4.3221007793208,21.6419517638111,0,0,0,0,0,0,10.5753327099485,18.2478476195126,12.4811791469943,0.782391344348039,1.09012578190223,3.51497892375155,4.6663175777828,0.279972843250725,4.31257693094915,0,0,0,94.4142130251925,78.2236291032806,81.4761905798359,0.606949382578793,1.5869729378161,1.26766280701236,6.09920157724438,1.77858959222228,4.94944844504769,10.8775299882367,3.5524005747305,1.49800055259202,0,0.829516898467821,0.675029691658453,0.841299845405528,1.99955689082663,1.98781686856452,0.61245399607477,0.383381884072945,1.83843757322004,1.10115880999389,4.72443150915195,3.07213066512487,0.791317726381163,0.731901148819277,1.04182674111352,1.67509799400829,1.68828783009504,1.68078072554491,2.65165726926301,2.42031857358475,1.4911955666024,2.87759534666099,4.38315048619356,461.754130501773,19.7897491705719,0.679971333707751,0,0.649776417447669,0,3.08977724289854,2.04516387093669,0.779358013808606,1.41335829804136,0.14084341977668,3.84979432242953,2.54805239706646,7.11066703153331,126.64725899156,125.159773544699,126.886635698711,4.5673551887624,2.58937883647172,2.22663208597237,1.38788261412909,2.13125834818499,2.30615497256059,3.01445281105245,2.11659672844269,1.0053327306374,21.5059621928905,12.0017466243527,0,2.91180329905337,0.883366073841574,5.33362778448744,29.8226817948995,1.46390398505774,4.1889341362691,2.81002760729451,0.718890747035522,0.599902730993408,0.127070227073065,5.09288173976397,6.8625090422794,3.76963056338593,3.82413504423008,8.43861009190091,4.36354893575076,5.353961681236,8.24898847187562,2.36373244159177,3.0326731012041,7.15502310014011,2.86264974517948,0.689706313300419,1.98068342785884,2.10986744970001,3.06164246180975,1.0249097622788,0.843315521037559,2.58703370739016,0.215567992932842,1.13463648100692,2.28736461413134,1.09597866213787,4.17070873838397,4.179025998266,9.26019613835746,4.37875387000685,0,0,0.284163499395593,15.3273071676271,11.2572508790926,12.7844063637321,14.4414288706978,8.65762619688577,11.8785676923281,13.7195027402741,11.8040296615832,6.42209383019432,5.75959474697182,6.40253109908471,6.4044359541226,4.9707995724613,5.92785311285837,8.58921080066379,4.6263788684108,0.617427674275707,2.64335026387038,2.3800550999719,3.83918850963421,9.0572302025571,5.28356591420583,6.25218926332362,6.44896327150124,8.17970192284004,2.84717436926707,6.25856027951241,7.28872105520782,6.96347652144028,7.21367122340745,1.79763881730844,12.752144942607,13.9398891278057,3.22435431620239,2.97046132785295,4.50830942692322,5.29493452397817,4.46090720485539,1.82353131714828,2.84564417059158,1.91893192373483,2.19798218977925,3.08492909804501,1.1858105083486,1.83529616287703,1.76903095601883,0.674586337154561,0.811440485554012,0.964708639009667,0.50925170356284,3.16465751195892,3.72911021582581,1.64736847912849,0,3.34926852901653,1.5601883655728,2.27320990152401,2.51156378930677,2.41221760681684,67.4349144108107,6.06372517665551,5.0519142697028,5.09235257325564,7.04070744865506,15.5780819420889,32.8500224422699,20.4890330250689,30.8964882448134,30.5621271715309,14.6698387164888,38.180152328767,28.147652044141,40.9356835785678,0,0,3.44234991113325,2.75936746304733,5.61927064957272,2.81308047821288,2.45902418065013,8.58401152494868,3.78609863299508,6.24701990874622,0.646270193198397,0.716906393857656,0,0,2.83367491172426,4.67609372658099,0.395287777946524,3.85585579706168,12.2068473279111,7.30068975035746,4.72372182125371,37.7781581607106,7.96470830039777,3.64170954232472,2.72091201268276,3.58349651536206,7.97315110778086,15.3717573971964,10.5955600198971,3.27180356529755,7.12994756769443,6.0046984007805,6.32511651449993,1.03135543248187,0.340439605753788,2.70091641046965,3.36332577835162,2.57204442037911,1.95074257006501,2.31879462882692,1.15184314421485,2.13125464380219,3.52007562095566,20.5477108737906,3.30792597082443,17.8077153176798,18.4069446433332,11.7610203609904,23.9938411446304,28.8887983551308,4.37221254944776,4.45020724825223,0.512612642393558,4.74689796315412,4.62986318424279,0.941842285023455,0.683471138605126,0.457556346413045,0.679913719975421,1.39951452323658,0.690999869022119,16.2294005062569,2.37251995185852,3.04979200690273,3.45617090629764,5.85447228840512,11.1364907510551,13.4864346384821,12.8939390931524,10.2084817373772,10.8876577565106,6.83473244395618,1.12738587736838,2.8408143748356,4.13646226142744,8.36140109879405,7.10379029127521,7.43406952159424,3.75543163666413,10.1559420178281,9.54220034273969,1.93267296660805,2.30424005006292,2.21207784439725,2.22997736819181,2.2596410576262,1.42912905275575,2.14832034800978,2.38417625737518,0.480781798079875,0.886137163047463,0.201932899896295,0.457240839929999,0.705783295957884,1.36441033035653,0.192423683280659,0.701261413089414,9.29594572822367,0.443971906748129,0,0.335769232728157,9.27310051354514,19.7066599223741,32.4178374953059,25.7242054894879,2.50786052017682,2.82375921308533,2.76195141904306,6.30185064783336,3.78077001156113,2.74033007908257,2.2661816921691,4.72515750162264,1.80128481289688,1.35942722695261,4.14208249401456,0.31136204275253,1.99512436700516,2.56100408631201,2.67417388775123,0.838452650511929,2.75765262675021,8.44537565646138,5.76898160268904,6.09746498224449,4.80124702351215,8.36481689637791,5.65879024158229,5.24392441831341,4.9939618875798,4.99688579913835,3.33405583898152,4.63537303779422,3.8581844092741,5.35711671044299,3.67997300335993,8.9146005620208,5.6792257970988,4.76872379894642,4.79643174886684,4.23492211868988,7.1922416707925,4.93905526756486,6.83981249738391,3.12349461845482,6.17256498823512,4.74540072496697,2.36410757701352,9.00308294973317,4.64810523557898,5.40138510747196,5.74564329257276,7.25187986180766,7.52048689169044,11.0947232599929,5.07360263974886,4.63735671240843|short_description=p1@Edn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13614 | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=P22387,Q544E0 | |||
|association_with_transcript=342bp_to_ENSMUST00000021796,NM_010104,uc007qfl.2_5end | |||
|cluster_id=chr13:42396981..42396995,+ | |||
|description=CAGE_peak_1_at_Edn1_5end | |||
|id=chr13:42396981..42396995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.44e-09!23;UBERON:0001009!1.44e-09!23;UBERON:0005178!3.40e-09!17;UBERON:0005181!3.40e-09!17;UBERON:0002224!3.40e-09!17;UBERON:0000915!3.40e-09!17;UBERON:0008947!3.40e-09!17;UBERON:0003258!3.40e-09!17;UBERON:0007100!2.93e-07!18;UBERON:0000948!2.93e-07!18;UBERON:0005498!2.93e-07!18;UBERON:0004140!2.93e-07!18;UBERON:0009881!2.93e-07!18;UBERON:0004141!2.93e-07!18;UBERON:0003084!2.93e-07!18;UBERON:0007005!2.93e-07!18;UBERON:0004139!2.93e-07!18;UBERON:0004291!2.93e-07!18;UBERON:0002048!3.41e-07!14;UBERON:0000117!3.41e-07!14;UBERON:0000171!3.41e-07!14;UBERON:0000170!3.41e-07!14;UBERON:0005597!3.41e-07!14;UBERON:0000118!3.41e-07!14;UBERON:0000464!5.55e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.17e-09,23;UBERON:0001009,1.17e-09,23;UBERON:0005178,2.78e-09,17;UBERON:0005181,2.78e-09,17;UBERON:0002224,2.78e-09,17;UBERON:0000915,2.78e-09,17;UBERON:0008947,2.78e-09,17;UBERON:0003258,2.78e-09,17;UBERON:0007100,2.52e-07,18;UBERON:0000948,2.52e-07,18;UBERON:0005498,2.52e-07,18;UBERON:0004140,2.52e-07,18;UBERON:0009881,2.52e-07,18;UBERON:0004141,2.52e-07,18;UBERON:0003084,2.52e-07,18;UBERON:0007005,2.52e-07,18;UBERON:0004139,2.52e-07,18;UBERON:0004291,2.52e-07,18;UBERON:0002048,2.94e-07,14;UBERON:0000117,2.94e-07,14;UBERON:0000171,2.94e-07,14;UBERON:0000170,2.94e-07,14;UBERON:0005597,2.94e-07,14;UBERON:0000118,2.94e-07,14 | |||
|phase1_expression=0,5.58360652222978,15.4699741392442,17.2404600444893,40.0716583957078,27.364321321638,44.8536269943409,0,0.84473233291,0.936258105287974,0,0,0,0,0,0.202475267389826,0,0,0,0,15.818051968099,0,0,2.3998863419011,2.52350209173887,7.46501553349526,10.7690499039769,12.7128027284675,8.55105387553682,0.504060259519861,0.221730510655305,0,0,0,13.5760261283099,4.3221007793208,21.6419517638111,0,0,0,0,0,0,10.5753327099485,18.2478476195126,12.4811791469943,0.782391344348039,1.09012578190223,3.51497892375155,4.6663175777828,0.279972843250725,4.31257693094915,0,0,0,94.4142130251925,78.2236291032806,81.4761905798359,0.606949382578793,1.5869729378161,1.26766280701236,6.09920157724438,1.77858959222228,4.94944844504769,10.8775299882367,3.5524005747305,1.49800055259202,0,0.829516898467821,0.675029691658453,0.841299845405528,1.99955689082663,1.98781686856452,0.61245399607477,0.383381884072945,1.83843757322004,1.10115880999389,4.72443150915195,3.07213066512487,0.791317726381163,0.731901148819277,1.04182674111352,1.67509799400829,1.68828783009504,1.68078072554491,2.65165726926301,2.42031857358475,1.4911955666024,2.87759534666099,4.38315048619356,461.754130501773,19.7897491705719,0.679971333707751,0,0.649776417447669,0,3.08977724289854,2.04516387093669,0.779358013808606,1.41335829804136,0.14084341977668,3.84979432242953,2.54805239706646,7.11066703153331,126.64725899156,125.159773544699,126.886635698711,4.5673551887624,2.58937883647172,2.22663208597237,1.38788261412909,2.13125834818499,2.30615497256059,3.01445281105245,2.11659672844269,1.0053327306374,21.5059621928905,12.0017466243527,0,2.91180329905337,0.883366073841574,5.33362778448744,29.8226817948995,1.46390398505774,4.1889341362691,2.81002760729451,0.718890747035522,0.599902730993408,0.127070227073065,5.09288173976397,6.8625090422794,3.76963056338593,3.82413504423008,8.43861009190091,4.36354893575076,5.353961681236,8.24898847187562,2.36373244159177,3.0326731012041,7.15502310014011,2.86264974517948,0.689706313300419,1.98068342785884,2.10986744970001,3.06164246180975,1.0249097622788,0.843315521037559,2.58703370739016,0.215567992932842,1.13463648100692,2.28736461413134,1.09597866213787,4.17070873838397,4.179025998266,9.26019613835746,4.37875387000685,0,0,0.284163499395593,15.3273071676271,11.2572508790926,12.7844063637321,14.4414288706978,8.65762619688577,11.8785676923281,13.7195027402741,11.8040296615832,6.42209383019432,5.75959474697182,6.40253109908471,6.4044359541226,4.9707995724613,5.92785311285837,8.58921080066379,4.6263788684108,0.617427674275707,2.64335026387038,2.3800550999719,3.83918850963421,9.0572302025571,5.28356591420583,6.25218926332362,6.44896327150124,8.17970192284004,2.84717436926707,6.25856027951241,7.28872105520782,6.96347652144028,7.21367122340745,1.79763881730844,12.752144942607,13.9398891278057,3.22435431620239,2.97046132785295,4.50830942692322,5.29493452397817,4.46090720485539,1.82353131714828,2.84564417059158,1.91893192373483,2.19798218977925,3.08492909804501,1.1858105083486,1.83529616287703,1.76903095601883,0.674586337154561,0.811440485554012,0.964708639009667,0.50925170356284,3.16465751195892,3.72911021582581,1.64736847912849,0,3.34926852901653,1.5601883655728,2.27320990152401,2.51156378930677,2.41221760681684,67.4349144108107,6.06372517665551,5.0519142697028,5.09235257325564,7.04070744865506,15.5780819420889,32.8500224422699,20.4890330250689,30.8964882448134,30.5621271715309,14.6698387164888,38.180152328767,28.147652044141,40.9356835785678,0,0,3.44234991113325,2.75936746304733,5.61927064957272,2.81308047821288,2.45902418065013,8.58401152494868,3.78609863299508,6.24701990874622,0.646270193198397,0.716906393857656,0,0,2.83367491172426,4.67609372658099,0.395287777946524,3.85585579706168,12.2068473279111,7.30068975035746,4.72372182125371,37.7781581607106,7.96470830039777,3.64170954232472,2.72091201268276,3.58349651536206,7.97315110778086,15.3717573971964,10.5955600198971,3.27180356529755,7.12994756769443,6.0046984007805,6.32511651449993,1.03135543248187,0.340439605753788,2.70091641046965,3.36332577835162,2.57204442037911,1.95074257006501,2.31879462882692,1.15184314421485,2.13125464380219,3.52007562095566,20.5477108737906,3.30792597082443,17.8077153176798,18.4069446433332,11.7610203609904,23.9938411446304,28.8887983551308,4.37221254944776,4.45020724825223,0.512612642393558,4.74689796315412,4.62986318424279,0.941842285023455,0.683471138605126,0.457556346413045,0.679913719975421,1.39951452323658,0.690999869022119,16.2294005062569,2.37251995185852,3.04979200690273,3.45617090629764,5.85447228840512,11.1364907510551,13.4864346384821,12.8939390931524,10.2084817373772,10.8876577565106,6.83473244395618,1.12738587736838,2.8408143748356,4.13646226142744,8.36140109879405,7.10379029127521,7.43406952159424,3.75543163666413,10.1559420178281,9.54220034273969,1.93267296660805,2.30424005006292,2.21207784439725,2.22997736819181,2.2596410576262,1.42912905275575,2.14832034800978,2.38417625737518,0.480781798079875,0.886137163047463,0.201932899896295,0.457240839929999,0.705783295957884,1.36441033035653,0.192423683280659,0.701261413089414,9.29594572822367,0.443971906748129,0,0.335769232728157,9.27310051354514,19.7066599223741,32.4178374953059,25.7242054894879,2.50786052017682,2.82375921308533,2.76195141904306,6.30185064783336,3.78077001156113,2.74033007908257,2.2661816921691,4.72515750162264,1.80128481289688,1.35942722695261,4.14208249401456,0.31136204275253,1.99512436700516,2.56100408631201,2.67417388775123,0.838452650511929,2.75765262675021,8.44537565646138,5.76898160268904,6.09746498224449,4.80124702351215,8.36481689637791,5.65879024158229,5.24392441831341,4.9939618875798,4.99688579913835,3.33405583898152,4.63537303779422,3.8581844092741,5.35711671044299,3.67997300335993,8.9146005620208,5.6792257970988,4.76872379894642,4.79643174886684,4.23492211868988,7.1922416707925,4.93905526756486,6.83981249738391,3.12349461845482,6.17256498823512,4.74540072496697,2.36410757701352,9.00308294973317,4.64810523557898,5.40138510747196,5.74564329257276,7.25187986180766,7.52048689169044,11.0947232599929,5.07360263974886,4.63735671240843 | |||
|short_description=p1@Edn1 | |||
}} |
Latest revision as of 14:57, 1 October 2015
Short description: | p1@Edn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Edn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | 342bp_to_ENSMUST00000021796, NM_010104, uc007qfl.2_5end |
EntrezGene: | Edn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.17e-09 | 23 |
circulatory system | 1.17e-09 | 23 |
thoracic cavity element | 2.78e-09 | 17 |
thoracic segment organ | 2.78e-09 | 17 |
thoracic cavity | 2.78e-09 | 17 |
thoracic segment of trunk | 2.78e-09 | 17 |
respiratory primordium | 2.78e-09 | 17 |
endoderm of foregut | 2.78e-09 | 17 |
primary circulatory organ | 2.52e-07 | 18 |
heart | 2.52e-07 | 18 |
primitive heart tube | 2.52e-07 | 18 |
primary heart field | 2.52e-07 | 18 |
anterior lateral plate mesoderm | 2.52e-07 | 18 |
heart tube | 2.52e-07 | 18 |
heart primordium | 2.52e-07 | 18 |
cardiac mesoderm | 2.52e-07 | 18 |
cardiogenic plate | 2.52e-07 | 18 |
heart rudiment | 2.52e-07 | 18 |
lung | 2.94e-07 | 14 |
respiratory tube | 2.94e-07 | 14 |
respiration organ | 2.94e-07 | 14 |
pair of lungs | 2.94e-07 | 14 |
lung primordium | 2.94e-07 | 14 |
lung bud | 2.94e-07 | 14 |