FFCP PHASE1:Hg19::chrX:13062697..13062745,-: Difference between revisions
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|id=chrX:13062697..13062745,-
|short_description=p1@FAM9C
|description=CAGE_peak_1_at_FAM9C_5end
|association_with_transcript=0bp_to_ENST00000333995_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=171484 | |EntrezGene=171484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18405 | |HGNC=18405 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZT9 | |UniProt=Q8IZT9 | ||
|association_with_transcript=0bp_to_ENST00000333995_5end | |||
|cluster_id=chrX:13062697..13062745,- | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_1_at_FAM9C_5end | |||
|id=chrX:13062697..13062745,- | |||
|ontology_enrichment_celltype=CL:0000039!6.94e-15!7;CL:0000586!6.94e-15!7;CL:0002322!3.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.82e-40;7!CL:0000586;7.82e-40;7!CL:0002138;3.56e-08;6!CL:0000054;6.42e-07;2!CL:0000137;6.42e-07;2!CL:0000092;6.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.51e-40,7;CL:0000586,7.51e-40,7;CL:0005020,3.90e-08,6;CL:0002138,3.90e-08,6;CL:0005022,3.90e-08,6;CL:0000054,6.42e-07,2;CL:0000137,6.42e-07,2;CL:0000092,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.26e-39;10!UBERON:0005564;1.26e-39;10!CL:0005022;3.56e-08;6!UBERON:0006603;6.41e-07;65 | |||
|ontology_enrichment_disease=DOID:114!1.84e-08!2;DOID:3095!3.68e-08!22;DOID:2994!3.68e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.80e-18;22!DOID:2994;5.80e-18;22!DOID:0060085;1.40e-12;1!DOID:3165;1.40e-12;1!DOID:0060121;1.40e-12;1!DOID:2438;1.40e-12;1!DOID:4418;1.40e-12;1!DOID:200;6.42e-07;2!DOID:4305;6.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.71e-18,22;DOID:2994,5.71e-18,22;DOID:0060085,1.40e-12,1;DOID:3165,1.40e-12,1;DOID:0060121,1.40e-12,1;DOID:2438,1.40e-12,1;DOID:4418,1.40e-12,1;DOID:200,6.42e-07,2;DOID:4305,6.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.42e-18!8;UBERON:0003135!3.85e-13!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.44e-49;8!UBERON:0003135;5.22e-36;11!UBERON:0000991;9.59e-19;21!UBERON:0003101;7.04e-18;22!UBERON:0000079;7.04e-18;22!UBERON:0002323;2.44e-09;45!UBERON:0002553;8.16e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.33e-49,8;UBERON:0003135,4.92e-36,11;UBERON:0000991,9.29e-19,21;UBERON:0009196,9.29e-19,21;UBERON:0009117,9.29e-19,21;UBERON:0005564,9.29e-19,21;UBERON:0004176,6.83e-18,22;UBERON:0003101,6.83e-18,22;UBERON:0000079,6.83e-18,22;UBERON:0002323,3.25e-11,46;UBERON:0004458,1.73e-10,49;UBERON:0003886,1.86e-09,54;UBERON:0002553,2.70e-08,61;UBERON:0003133,5.35e-08,48 | |||
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| ||
|short_description=p1@FAM9C | |||
}} | }} |
Latest revision as of 10:43, 19 September 2015
Short description: | p1@FAM9C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM9C_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 0bp_to_ENST00000333995_5end |
EntrezGene: | FAM9C |
HGNC: | 18405 |
UniProt: | Q8IZT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.51e-40 | 7 |
germ cell | 7.51e-40 | 7 |
lymphangioblast | 3.90e-08 | 6 |
endothelial cell of lymphatic vessel | 3.90e-08 | 6 |
vascular lymphangioblast | 3.90e-08 | 6 |
bone matrix secreting cell | 6.42e-07 | 2 |
osteocyte | 6.42e-07 | 2 |
osteoclast | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.33e-49 | 8 |
male reproductive organ | 4.92e-36 | 11 |
gonad | 9.29e-19 | 21 |
indifferent external genitalia | 9.29e-19 | 21 |
indifferent gonad | 9.29e-19 | 21 |
gonad primordium | 9.29e-19 | 21 |
external genitalia | 6.83e-18 | 22 |
male organism | 6.83e-18 | 22 |
male reproductive system | 6.83e-18 | 22 |
body cavity | 3.25e-11 | 46 |
body cavity or lining | 1.73e-10 | 49 |
body cavity precursor | 1.86e-09 | 54 |
anatomical cavity | 2.70e-08 | 61 |
reproductive organ | 5.35e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.71e-18 | 22 |
germ cell cancer | 5.71e-18 | 22 |
organ system benign neoplasm | 1.40e-12 | 1 |
skin benign neoplasm | 1.40e-12 | 1 |
integumentary system benign neoplasm | 1.40e-12 | 1 |
dermis tumor | 1.40e-12 | 1 |
cutaneous fibrous histiocytoma | 1.40e-12 | 1 |
giant cell tumor | 6.42e-07 | 2 |
bone giant cell tumor | 6.42e-07 | 2 |