FFCP PHASE1:Mm9::chr16:29541470..29541495,-: Difference between revisions
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{{FFCP|EntrezGene=224079|HGNC=|MCL_coexpression_id=2174|UniProt=E9QPP7,Q5XF90|association_with_transcript=73bp_to_ENSMUST00000057018,NM_001164612,NM_172613,uc007ywa.2,uc012aec.1_5end|description=CAGE_peak_2_at_Atp13a4_5end|id=chr16:29541470..29541495,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,5.29e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!3.22e-09!17;UBERON:0002298!3.78e-07!6;UBERON:0002048!5.45e-07!14;UBERON:0000117!5.45e-07!14;UBERON:0000171!5.45e-07!14;UBERON:0000170!5.45e-07!14;UBERON:0005597!5.45e-07!14;UBERON:0000118!5.45e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002950,2.23e-10,4;UBERON:0001891,2.23e-10,4;UBERON:0009616,2.23e-10,4;UBERON:0010286,2.23e-10,4;UBERON:0002038,5.29e-08,3;UBERON:0009663,5.29e-08,3;UBERON:0009661,5.29e-08,3;UBERON:0000125,5.29e-08,3;UBERON:0002308,5.29e-08,3;UBERON:0004733,1.26e-07,6;UBERON:0004732,1.26e-07,6;UBERON:0002028,1.26e-07,6;UBERON:0007277,1.26e-07,6;UBERON:0000073,1.59e-07,54;UBERON:0004121,1.70e-07,95;UBERON:0000924,1.70e-07,95;UBERON:0006601,1.70e-07,95;UBERON:0007023,2.43e-07,51;UBERON:0001911,6.66e-07,2;UBERON:0000076,6.66e-07,2;UBERON:0005333,6.66e-07,2;UBERON:0008425,6.66e-07,2;UBERON:0005311,6.66e-07,2;UBERON:0001049,7.20e-07,52;UBERON:0005068,7.20e-07,52;UBERON:0006241,7.20e-07,52;UBERON:0007135,7.20e-07,52;UBERON:0002616,7.66e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,1.65993539510744,1.22885226604995,0,0,0.52091337055676,2.23346399201105,1.12552522006336,1.22238598221448,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,1.8850203613211,0,0,0,0,2.09706895166752,1.37250180845588,0,0.869121600961382,1.27857728665165,1.87009240103604,2.92034273521964,0,0.746441823660558,11.3725241295154,0.631325567659422,0,0,0,0,0,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,1.39300866608867,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,1.26173969138476,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.456994050438915,0,0,0.775809948670503,0.350679099451593,0.505892296994058,1.03327103585722,1.255989822731,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,1.41871629695572,0.221464689648775,0.956728611944923,2.45794972073607,2.07221978239075,1.01254341007058,0,0,13.769399644533,9.10591262805617,4.49541651965817,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.16488625294148,0.645857706783622,0.542816324353403,0.835606408021955,0.820704498725306,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.404593039154462,0.0826534557253359,1.04702376793612,0.129614973291793,6.21339313086926,0,0,0,0.194451188344048,0,0,0,0.13020438484395,1.15345278868282,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0.750729901804728,1.83151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0.754505365544305,0.0936415074698824,0,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p2@Atp13a4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224079 | |||
|HGNC= | |||
|MCL_coexpression_id=2174 | |||
|TSSclassifier=NA | |||
|UniProt=E9QPP7,Q5XF90 | |||
|association_with_transcript=73bp_to_ENSMUST00000057018,NM_001164612,NM_172613,uc007ywa.2,uc012aec.1_5end | |||
|cluster_id=chr16:29541470..29541495,- | |||
|description=CAGE_peak_2_at_Atp13a4_5end | |||
|id=chr16:29541470..29541495,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.29e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!3.22e-09!17;UBERON:0002298!3.78e-07!6;UBERON:0002048!5.45e-07!14;UBERON:0000117!5.45e-07!14;UBERON:0000171!5.45e-07!14;UBERON:0000170!5.45e-07!14;UBERON:0005597!5.45e-07!14;UBERON:0000118!5.45e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,2.23e-10,4;UBERON:0001891,2.23e-10,4;UBERON:0009616,2.23e-10,4;UBERON:0010286,2.23e-10,4;UBERON:0002038,5.29e-08,3;UBERON:0009663,5.29e-08,3;UBERON:0009661,5.29e-08,3;UBERON:0000125,5.29e-08,3;UBERON:0002308,5.29e-08,3;UBERON:0004733,1.26e-07,6;UBERON:0004732,1.26e-07,6;UBERON:0002028,1.26e-07,6;UBERON:0007277,1.26e-07,6;UBERON:0000073,1.59e-07,54;UBERON:0004121,1.70e-07,95;UBERON:0000924,1.70e-07,95;UBERON:0006601,1.70e-07,95;UBERON:0007023,2.43e-07,51;UBERON:0001911,6.66e-07,2;UBERON:0000076,6.66e-07,2;UBERON:0005333,6.66e-07,2;UBERON:0008425,6.66e-07,2;UBERON:0005311,6.66e-07,2;UBERON:0001049,7.20e-07,52;UBERON:0005068,7.20e-07,52;UBERON:0006241,7.20e-07,52;UBERON:0007135,7.20e-07,52;UBERON:0002616,7.66e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,1.65993539510744,1.22885226604995,0,0,0.52091337055676,2.23346399201105,1.12552522006336,1.22238598221448,0.883885756421003,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,1.8850203613211,0,0,0,0,2.09706895166752,1.37250180845588,0,0.869121600961382,1.27857728665165,1.87009240103604,2.92034273521964,0,0.746441823660558,11.3725241295154,0.631325567659422,0,0,0,0,0,0.2562274405697,0.0937017245597288,1.03481348295606,0,0,0,0,0,1.39300866608867,0.411564272815887,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,1.26173969138476,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.456994050438915,0,0,0.775809948670503,0.350679099451593,0.505892296994058,1.03327103585722,1.255989822731,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.739012760666419,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,1.41871629695572,0.221464689648775,0.956728611944923,2.45794972073607,2.07221978239075,1.01254341007058,0,0,13.769399644533,9.10591262805617,4.49541651965817,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0.16488625294148,0.645857706783622,0.542816324353403,0.835606408021955,0.820704498725306,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.404593039154462,0.0826534557253359,1.04702376793612,0.129614973291793,6.21339313086926,0,0,0,0.194451188344048,0,0,0,0.13020438484395,1.15345278868282,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0.750729901804728,1.83151624267265,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0.754505365544305,0.0936415074698824,0,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p2@Atp13a4 | |||
}} |
Latest revision as of 20:33, 1 October 2015
Short description: | p2@Atp13a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Atp13a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2174 |
Association with transcript: | 73bp_to_ENSMUST00000057018, NM_001164612, NM_172613, uc007ywa.2, uc012aec.1_5end |
EntrezGene: | Atp13a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 2.23e-10 | 4 |
midbrain | 2.23e-10 | 4 |
presumptive midbrain | 2.23e-10 | 4 |
midbrain neural tube | 2.23e-10 | 4 |
substantia nigra | 5.29e-08 | 3 |
telencephalic nucleus | 5.29e-08 | 3 |
midbrain nucleus | 5.29e-08 | 3 |
neural nucleus | 5.29e-08 | 3 |
nucleus of brain | 5.29e-08 | 3 |
segmental subdivision of hindbrain | 1.26e-07 | 6 |
segmental subdivision of nervous system | 1.26e-07 | 6 |
hindbrain | 1.26e-07 | 6 |
presumptive hindbrain | 1.26e-07 | 6 |
regional part of nervous system | 1.59e-07 | 54 |
ectoderm-derived structure | 1.70e-07 | 95 |
ectoderm | 1.70e-07 | 95 |
presumptive ectoderm | 1.70e-07 | 95 |
adult organism | 2.43e-07 | 51 |
mammary gland | 6.66e-07 | 2 |
external ectoderm | 6.66e-07 | 2 |
mammary bud | 6.66e-07 | 2 |
mammary ridge | 6.66e-07 | 2 |
mammary placode | 6.66e-07 | 2 |
neural tube | 7.20e-07 | 52 |
neural rod | 7.20e-07 | 52 |
future spinal cord | 7.20e-07 | 52 |
neural keel | 7.20e-07 | 52 |
regional part of brain | 7.66e-07 | 46 |