FFCP PHASE1:Hg19::chrX:136648768..136648781,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:136648768..136648781,+
|short_description=p6@ZIC3
|description=CAGE_peak_6_at_ZIC3_5end
|association_with_transcript=91bp_to_ENST00000370606_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7547 | |EntrezGene=7547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12874 | |HGNC=12874 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JY75 | |UniProt=Q5JY75 | ||
|association_with_transcript=91bp_to_ENST00000370606_5end | |||
|cluster_id=chrX:136648768..136648781,+ | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_6_at_ZIC3_5end | |||
|id=chrX:136648768..136648781,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.12e-20!5;CL:0000133!1.64e-12!59;CL:0000064!1.69e-12!3;CL:0005012!1.69e-12!3;CL:0000067!1.69e-12!3;CL:0002304!1.69e-12!3;CL:0002603!2.48e-12!3;CL:0000708!8.98e-12!3;CL:0000075!2.42e-10!27;CL:0000221!7.66e-10!71;CL:0000306!2.04e-09!4;CL:0002222!2.04e-09!4;CL:0002224!2.04e-09!4;CL:0000039!3.79e-09!7;CL:0000586!3.79e-09!7;CL:0000128!7.27e-09!7;CL:0000126!7.27e-09!7;CL:0000127!7.27e-09!7;CL:0002453!7.27e-09!7;CL:0000333!3.87e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.41e-55;5!CL:0000075;1.98e-19;27!CL:0002321;1.40e-18;15!CL:0000064;1.65e-15;3!CL:0000067;1.65e-15;3!CL:0005012;1.65e-15;3!CL:0002304;1.65e-15;3!CL:0002603;1.65e-15;3!CL:0000039;1.27e-14;7!CL:0000586;1.27e-14;7!CL:0000710;8.86e-14;20!CL:0000306;4.83e-12;4!CL:0002222;4.83e-12;4!CL:0002224;4.83e-12;4!CL:0000148;1.14e-10;10!CL:0002077;5.10e-08;34!CL:0000147;9.13e-08;14!CL:0000128;3.67e-07;7!CL:0000126;3.67e-07;7!CL:0000127;3.67e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.05e-56,5;CL:0000075,1.95e-19,27;CL:0002603,1.22e-15,3;CL:0000064,1.91e-15,3;CL:0000067,1.91e-15,3;CL:0005012,1.91e-15,3;CL:0002304,1.91e-15,3;CL:0000039,1.57e-14,7;CL:0000586,1.57e-14,7;CL:0000710,8.28e-14,20;CL:0000306,5.40e-12,4;CL:0002222,5.40e-12,4;CL:0002224,5.40e-12,4;CL:0000148,9.87e-11,10;CL:0000541,9.87e-11,10;CL:0000133,1.08e-10,59;CL:0000221,1.17e-08,72;CL:0002077,4.40e-08,34;CL:0000147,8.22e-08,14;CL:0000128,3.24e-07,7;CL:0000126,3.24e-07,7;CL:0000127,3.24e-07,7;CL:0002453,3.24e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.35e-18;10!UBERON:0005564;6.35e-18;10!CL:0000133;3.60e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!6.47e-13!22;DOID:2994!6.47e-13!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.38e-12;22!DOID:2994;1.38e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.55e-12,22;DOID:2994,1.55e-12,22 | |||
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| ||
|short_description=p6@ZIC3 | |||
}} | }} |
Latest revision as of 15:53, 19 September 2015
Short description: | p6@ZIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZIC3_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | 91bp_to_ENST00000370606_5end |
EntrezGene: | ZIC3 |
HGNC: | 12874 |
UniProt: | Q5JY75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.05e-56 | 5 |
columnar/cuboidal epithelial cell | 1.95e-19 | 27 |
astrocyte of the cerebellum | 1.22e-15 | 3 |
ciliated cell | 1.91e-15 | 3 |
ciliated epithelial cell | 1.91e-15 | 3 |
multi-ciliated epithelial cell | 1.91e-15 | 3 |
non-pigmented ciliary epithelial cell | 1.91e-15 | 3 |
germ line cell | 1.57e-14 | 7 |
germ cell | 1.57e-14 | 7 |
neurecto-epithelial cell | 8.28e-14 | 20 |
crystallin accumulating cell | 5.40e-12 | 4 |
vertebrate lens cell | 5.40e-12 | 4 |
lens epithelial cell | 5.40e-12 | 4 |
melanocyte | 9.87e-11 | 10 |
melanoblast | 9.87e-11 | 10 |
neurectodermal cell | 1.08e-10 | 59 |
ectodermal cell | 1.17e-08 | 72 |
ecto-epithelial cell | 4.40e-08 | 34 |
pigment cell | 8.22e-08 | 14 |
oligodendrocyte | 3.24e-07 | 7 |
macroglial cell | 3.24e-07 | 7 |
astrocyte | 3.24e-07 | 7 |
oligodendrocyte precursor cell | 3.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.55e-12 | 22 |
germ cell cancer | 1.55e-12 | 22 |