FFCP PHASE1:Hg19::chr5:137879399..137879412,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2107 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3477 | |||
|TSSclassifier=strong | |||
|UniProt=P62495 | |||
|association_with_transcript=-410bp_to_ENST00000360541_5end | |||
|cluster_id=chr5:137879399..137879412,- | |||
|coexpression_cluster_id=C1342 | |||
|description=CAGE_peak_4_at_ETF1_5end | |||
|id=chr5:137879399..137879412,- | |||
|ontology_enrichment_celltype=CL:0002057!2.51e-28!42;CL:0000860!6.69e-27!45;CL:0000738!2.73e-26!140;CL:0000766!1.77e-22!76;CL:0000037!1.07e-21!172;CL:0000566!1.07e-21!172;CL:0002087!1.68e-20!119;CL:0002009!5.19e-20!65;CL:0002031!6.57e-20!124;CL:0000557!1.93e-19!71;CL:0000988!3.84e-19!182;CL:0002032!4.26e-19!165;CL:0000837!4.26e-19!165;CL:0002194!2.89e-18!63;CL:0000576!2.89e-18!63;CL:0000040!2.89e-18!63;CL:0000559!2.89e-18!63;CL:0000839!2.59e-17!70;CL:0000763!9.67e-17!112;CL:0000049!9.67e-17!112;CL:0002320!7.90e-12!365;CL:0000134!2.82e-11!358;CL:0002393!5.92e-11!9;CL:0002397!5.92e-11!9;CL:0000219!5.93e-11!390;CL:0000624!9.92e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;5.92e-19;3!CL:0002393;3.23e-10;6!CL:0002397;3.23e-10;6!CL:0000766;5.33e-10;69!CL:0002087;5.78e-09;104!CL:0000791;3.72e-08;18!CL:0000789;3.72e-08;18!CL:0002419;3.72e-08;18!CL:0000094;1.36e-07;8!CL:0000542;1.89e-07;53!CL:0000576;3.96e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.38e-25,136;CL:0002087,7.08e-21,115;CL:0002031,6.99e-20,120;CL:0000037,1.87e-19,168;CL:0000623,5.43e-19,3;CL:0000825,5.43e-19,3;CL:0002032,1.07e-18,161;CL:0000837,1.07e-18,161;CL:0000988,3.27e-18,177;CL:0000860,9.35e-13,42;CL:0002057,9.35e-13,42;CL:0000838,4.06e-12,52;CL:0000542,7.50e-12,53;CL:0000051,7.50e-12,53;CL:0000766,1.20e-11,72;CL:0002393,2.47e-11,9;CL:0002397,2.47e-11,9;CL:0000473,6.06e-11,48;CL:0000234,6.06e-11,48;CL:0002009,6.46e-10,61;CL:0000134,4.47e-09,354;CL:0000557,7.26e-09,67;CL:0002320,8.61e-09,361;CL:0002194,2.07e-08,59;CL:0000576,2.07e-08,59;CL:0000040,2.07e-08,59;CL:0000559,2.07e-08,59;CL:0000763,2.88e-08,108;CL:0000049,2.88e-08,108;CL:0000791,4.65e-08,18;CL:0000789,4.65e-08,18;CL:0002420,4.65e-08,18;CL:0002419,4.65e-08,18;CL:0000790,4.65e-08,18;CL:0000219,8.69e-08,386;CL:0000094,1.03e-07,8;CL:0000839,2.35e-07,66;CL:0000034,6.49e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.41e-10;42!CL:0000790;3.72e-08;18!CL:0000051;1.89e-07;53 | |||
|ontology_enrichment_disease=DOID:120!2.48e-11!27;DOID:193!3.85e-10!29;DOID:2394!3.85e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.13e-18!80;UBERON:0001474!2.29e-17!86;UBERON:0002390!3.30e-14!102;UBERON:0003061!3.30e-14!102;UBERON:0004765!4.25e-14!101;UBERON:0001434!4.25e-14!101;UBERON:0002384!1.23e-11!375;UBERON:0002193!1.24e-11!112;UBERON:0002405!5.40e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.11e-08,371;UBERON:0002371,1.34e-07,76;UBERON:0001474,6.56e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.767658796194425,0.77408061658038,0,0,0,0.0774672005803016,0,0.880801318004542,3.32397245119126,3.81034450193269,2.82114131930607,0,0,0,0.290796477559129,0.755751887377619,0.485168122375632,0.929716147622738,0,0.619412741790207,0,0.256160706529101,0.709446689665756,0.689491361473237,0.645484683583826,0,1.31769637679823,0.545812300115692,0.224723484445085,0.918251677112708,0.962787081228281,1.91801137739712,0,0.199463657621632,1.70489900213078,0.870627715885752,0,0,0.75374599577023,0,1.3031330682307,1.21079900526674,0.368277635987565,1.26584954976354,0.422510572623884,0.637812899895131,0.838634582033504,0.786300418025466,0.600707571366025,0.32145117339416,0.285012743741249,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,5.69212969109448,1.76171156811282,3.44045905312706,0,1.68152568894461,0.263384084775077,0.786839080455332,1.96505381374582,1.23360899399706,0.167186495390678,0.977766799900771,0.946895611469467,0,0.111410456885174,0.294605907474837,0.664601683750863,0,0,0.390178042679635,0,0,0,0.444859689486181,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,1.33720097891754,1.01377082717959,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0,0,0,0,0,0,0,0,2.01947019395292,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,1.18218456121156,1.72502059887614,2.95188983443421,0,0,0,0,0,0.749007023947182,0,2.48649308061621,0.12269149171914,0,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.445234820091624,0,0.211125408127993,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.32681539055697,0.278847488557207,0,0,0,0.359030577639089,0,0.638002319463839,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0.400794101257669,0,0,0,0.114536596165916,0,0.288109595976299,0.124252535565433,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,0.674921674654501,3.86900977278975,0,0,0,0,0.422401346077626,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.686520205190771,0,0,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0.53168342911599,1.5652351854352,0.300515217994437,0.380805212168795,0,0.727394636810238,0.214821114084977,0.464033759878494,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490696182767533,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0.255788742607303,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0.558644917973244,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,1.24082554265728,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.11294608203896,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.106727345877715,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p4@ETF1 | |||
}} |
Latest revision as of 23:14, 24 September 2015
Short description: | p4@ETF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ETF1_5end |
Coexpression cluster: | C1342_CD14_CD19_Eosinophils_Neutrophils_Peripheral_Natural_Basophils |
Association with transcript: | -410bp_to_ENST00000360541_5end |
EntrezGene: | ETF1 |
HGNC: | 3477 |
UniProt: | P62495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.11e-08 | 371 |
bone marrow | 1.34e-07 | 76 |
bone element | 6.56e-07 | 82 |